RNA–Protein interactions for RNA: ENST00000458632.2

SHANK2-212, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 635 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-212ENST00000458632 SPG7Q9UQ90 795 aa16.62■□□□□ 0.25
SHANK2-212ENST00000458632 PLCH1Q4KWH8 1693 aa16.62■□□□□ 0.25
SHANK2-212ENST00000458632 UPF1Q92900 1129 aaKnown RBP eCLIP16.61■□□□□ 0.25
SHANK2-212ENST00000458632 NRAPQ86VF7 1730 aa16.6■□□□□ 0.25
SHANK2-212ENST00000458632 PTF1AQ7RTS3 328 aa16.6■□□□□ 0.25
SHANK2-212ENST00000458632 ADAMTS8Q9UP79 889 aa16.6■□□□□ 0.25
SHANK2-212ENST00000458632 AMOTQ4VCS5 1084 aa16.59■□□□□ 0.25
SHANK2-212ENST00000458632 RSPH6AQ9H0K4 717 aa16.59■□□□□ 0.25
SHANK2-212ENST00000458632 RGPD5Q99666 1765 aa16.59■□□□□ 0.25
SHANK2-212ENST00000458632 SOCS7O14512 581 aa16.58■□□□□ 0.24
SHANK2-212ENST00000458632 KCNQ2O43526 872 aa16.58■□□□□ 0.24
SHANK2-212ENST00000458632 TRIM37O94972 964 aa16.58■□□□□ 0.24
SHANK2-212ENST00000458632 MTHFSDQ2M296 383 aaKnown RBP16.58■□□□□ 0.24
SHANK2-212ENST00000458632 NCAPD2Q15021 1401 aa16.57■□□□□ 0.24
SHANK2-212ENST00000458632 KDRP35968 1356 aa16.57■□□□□ 0.24
SHANK2-212ENST00000458632 PRKAR2BP31323 418 aa16.57■□□□□ 0.24
SHANK2-212ENST00000458632 NKX1-1Q15270 411 aaPredicted RBP16.57■□□□□ 0.24
SHANK2-212ENST00000458632 IFNL2Q8IZJ0 200 aa16.57■□□□□ 0.24
SHANK2-212ENST00000458632 PNISRQ8TF01 805 aaKnown RBP16.57■□□□□ 0.24
SHANK2-212ENST00000458632 LTN1O94822 1766 aa16.56■□□□□ 0.24
SHANK2-212ENST00000458632 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.56■□□□□ 0.24
SHANK2-212ENST00000458632 PHKG2P15735 406 aa16.56■□□□□ 0.24
SHANK2-212ENST00000458632 PRIM1P49642 420 aaKnown RBP16.56■□□□□ 0.24
SHANK2-212ENST00000458632 ACSBG1Q96GR2 724 aa16.56■□□□□ 0.24
SHANK2-212ENST00000458632 PLEKHF1Q96S99 279 aa16.56■□□□□ 0.24
SHANK2-212ENST00000458632 MEGF6O75095 1541 aa16.55■□□□□ 0.24
SHANK2-212ENST00000458632 COL3A1P02461 1466 aaPredicted RBP16.55■□□□□ 0.24
SHANK2-212ENST00000458632 CCDC125Q86Z20 511 aa16.55■□□□□ 0.24
SHANK2-212ENST00000458632 MIER1Q8N108 512 aa16.55■□□□□ 0.24
SHANK2-212ENST00000458632 ANKRD26Q9UPS8 1709 aa16.54■□□□□ 0.24
SHANK2-212ENST00000458632 ZNF530Q6P9A1 599 aaPredicted RBP16.54■□□□□ 0.24
SHANK2-212ENST00000458632 LGR6Q9HBX8 967 aa16.54■□□□□ 0.24
SHANK2-212ENST00000458632 MRS2Q9HD23 443 aa16.54■□□□□ 0.24
SHANK2-212ENST00000458632 OVOS2A0A0G2JMS6 1433 aa16.53■□□□□ 0.24
SHANK2-212ENST00000458632 BCL11BQ9C0K0 894 aaPredicted RBP16.53■□□□□ 0.24
SHANK2-212ENST00000458632 WDR43Q15061 677 aaKnown RBP eCLIP16.52■□□□□ 0.24
SHANK2-212ENST00000458632 MPRIPQ6WCQ1 1025 aa16.52■□□□□ 0.24
SHANK2-212ENST00000458632 PNNQ9H307 717 aaKnown RBP16.52■□□□□ 0.24
SHANK2-212ENST00000458632 PCDH11XQ9BZA7 1347 aa16.51■□□□□ 0.23
SHANK2-212ENST00000458632 PCDH11YQ9BZA8 1340 aa16.51■□□□□ 0.23
SHANK2-212ENST00000458632 APBA3O96018 575 aa16.51■□□□□ 0.23
SHANK2-212ENST00000458632 AKAP4Q5JQC9 854 aa16.51■□□□□ 0.23
SHANK2-212ENST00000458632 IL17REQ8NFR9 667 aa16.51■□□□□ 0.23
SHANK2-212ENST00000458632 C1orf141Q5JVX7 400 aa16.5■□□□□ 0.23
SHANK2-212ENST00000458632 DEFB132Q7Z7B7 95 aa16.5■□□□□ 0.23
SHANK2-212ENST00000458632 CCDC146Q8IYE0 955 aa16.5■□□□□ 0.23
SHANK2-212ENST00000458632 DCAF5Q96JK2 942 aa16.5■□□□□ 0.23
SHANK2-212ENST00000458632 HSP90AB1P08238 724 aaKnown RBP16.49■□□□□ 0.23
SHANK2-212ENST00000458632 GAS2L2Q8NHY3 880 aa16.49■□□□□ 0.23
SHANK2-212ENST00000458632 SYTL4Q96C24 671 aaPredicted RBP16.49■□□□□ 0.23
SHANK2-212ENST00000458632 ERVV-2B6SEH9 535 aa16.48■□□□□ 0.23
SHANK2-212ENST00000458632 PROM2Q8N271 834 aa16.48■□□□□ 0.23
SHANK2-212ENST00000458632 NFATC2IPQ8NCF5 419 aa16.48■□□□□ 0.23
SHANK2-212ENST00000458632 PIGBQ92521 554 aa16.48■□□□□ 0.23
SHANK2-212ENST00000458632 THSD7AQ9UPZ6 1657 aa16.47■□□□□ 0.23
SHANK2-212ENST00000458632 BCL9O00512 1426 aa16.47■□□□□ 0.23
SHANK2-212ENST00000458632 GNAT3A8MTJ3 354 aa16.47■□□□□ 0.23
SHANK2-212ENST00000458632 RNMTO43148 476 aaKnown RBP16.47■□□□□ 0.23
SHANK2-212ENST00000458632 EN1Q05925 392 aaPredicted RBP16.47■□□□□ 0.23
SHANK2-212ENST00000458632 SF3B2Q13435 895 aaKnown RBP16.47■□□□□ 0.23
SHANK2-212ENST00000458632 RUNDC1Q96C34 613 aa16.47■□□□□ 0.23
SHANK2-212ENST00000458632 TNS2Q63HR2 1409 aa16.46■□□□□ 0.23
SHANK2-212ENST00000458632 CCER2I3L3R5 266 aa16.46■□□□□ 0.23
SHANK2-212ENST00000458632 NEFMP07197 916 aa16.46■□□□□ 0.23
SHANK2-212ENST00000458632 CAMKK2Q96RR4 588 aa16.46■□□□□ 0.23
SHANK2-212ENST00000458632 RGPD2P0DJD1 1756 aa16.46■□□□□ 0.22
SHANK2-212ENST00000458632 PLSCR1O15162 318 aa16.45■□□□□ 0.22
SHANK2-212ENST00000458632 TMPOP42166 694 aaKnown RBP16.45■□□□□ 0.22
SHANK2-212ENST00000458632 RIPK4P57078 832 aa16.45■□□□□ 0.22
SHANK2-212ENST00000458632 CABP4P57796 275 aa16.45■□□□□ 0.22
SHANK2-212ENST00000458632 NFE2L2Q16236 605 aa16.45■□□□□ 0.22
SHANK2-212ENST00000458632 FAM9BQ8IZU0 186 aa16.45■□□□□ 0.22
SHANK2-212ENST00000458632 FAM208AQ9UK61 1670 aaKnown RBP16.45■□□□□ 0.22
SHANK2-212ENST00000458632 PLEKHG2Q9H7P9 1386 aa16.44■□□□□ 0.22
SHANK2-212ENST00000458632 APAF1O14727 1248 aa16.44■□□□□ 0.22
SHANK2-212ENST00000458632 HTATSF1O43719 755 aaKnown RBP16.44■□□□□ 0.22
SHANK2-212ENST00000458632 DCTN1Q14203 1278 aa16.44■□□□□ 0.22
SHANK2-212ENST00000458632 NEUROD2Q15784 382 aa16.44■□□□□ 0.22
SHANK2-212ENST00000458632 RRP7AQ9Y3A4 280 aaKnown RBP16.44■□□□□ 0.22
SHANK2-212ENST00000458632 EZH2Q15910 746 aaKnown RBP16.43■□□□□ 0.22
SHANK2-212ENST00000458632 MCM10Q7L590 875 aa16.43■□□□□ 0.22
SHANK2-212ENST00000458632 ASAP1Q9ULH1 1129 aa16.43■□□□□ 0.22
SHANK2-212ENST00000458632 SENP3-EIF4A1A0A087X0R7 540 aa16.42■□□□□ 0.22
SHANK2-212ENST00000458632 BAG6P46379 1132 aa16.42■□□□□ 0.22
SHANK2-212ENST00000458632 ATG3Q9NT62 314 aa16.42■□□□□ 0.22
SHANK2-212ENST00000458632 TMOD3Q9NYL9 352 aa16.42■□□□□ 0.22
SHANK2-212ENST00000458632 RTF1Q92541 710 aaKnown RBP16.41■□□□□ 0.22
SHANK2-212ENST00000458632 SLC52A2Q9HAB3 445 aa16.41■□□□□ 0.22
SHANK2-212ENST00000458632 MAPK8IP3Q9UPT6 1336 aa16.41■□□□□ 0.22
SHANK2-212ENST00000458632 TRIM35Q9UPQ4 493 aa16.4■□□□□ 0.22
SHANK2-212ENST00000458632 BRWD3Q6RI45 1802 aa16.4■□□□□ 0.22
SHANK2-212ENST00000458632 KCNQ4P56696 695 aa16.39■□□□□ 0.21
SHANK2-212ENST00000458632 TXNRD1Q16881 649 aa16.39■□□□□ 0.21
SHANK2-212ENST00000458632 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.21
SHANK2-212ENST00000458632 RGPD1P0DJD0 1748 aa16.39■□□□□ 0.21
SHANK2-212ENST00000458632 PARP4Q9UKK3 1724 aaKnown RBP16.39■□□□□ 0.21
SHANK2-212ENST00000458632 SLC39A6Q13433 755 aa16.38■□□□□ 0.21
SHANK2-212ENST00000458632 MIS18AQ9NYP9 233 aa16.38■□□□□ 0.21
SHANK2-212ENST00000458632 EP400Q96L91 3159 aa16.38■□□□□ 0.21
SHANK2-212ENST00000458632 TAF7Q15545 349 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms