RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 QSER1Q2KHR3 1735 aa22.01■■□□□ 1.11
CHCHD3-204ENST00000457942 POLD1P28340 1107 aa22.01■■□□□ 1.11
CHCHD3-204ENST00000457942 DDX54Q8TDD1 881 aaKnown RBP22.01■■□□□ 1.11
CHCHD3-204ENST00000457942 KAT6BQ8WYB5 2073 aa22.01■■□□□ 1.11
CHCHD3-204ENST00000457942 PNPLA7Q6ZV29 1317 aa22.01■■□□□ 1.11
CHCHD3-204ENST00000457942 AKT1S1Q96B36 256 aa22■■□□□ 1.11
CHCHD3-204ENST00000457942 SYTL4Q96C24 671 aaPredicted RBP22■■□□□ 1.11
CHCHD3-204ENST00000457942 LTV1Q96GA3 475 aaPredicted RBP21.99■■□□□ 1.11
CHCHD3-204ENST00000457942 FAM208AQ9UK61 1670 aaKnown RBP21.98■■□□□ 1.11
CHCHD3-204ENST00000457942 CDCA8Q53HL2 280 aa21.98■■□□□ 1.11
CHCHD3-204ENST00000457942 TFCP2L1Q9NZI6 479 aa21.98■■□□□ 1.11
CHCHD3-204ENST00000457942 AMPHP49418 695 aa21.96■■□□□ 1.11
CHCHD3-204ENST00000457942 COL24A1Q17RW2 1714 aa21.96■■□□□ 1.11
CHCHD3-204ENST00000457942 CLSPNQ9HAW4 1339 aa21.96■■□□□ 1.11
CHCHD3-204ENST00000457942 KIF20BQ96Q89 1820 aa21.96■■□□□ 1.11
CHCHD3-204ENST00000457942 MSH5O43196 834 aa21.95■■□□□ 1.1
CHCHD3-204ENST00000457942 IP6K1Q92551 441 aa21.95■■□□□ 1.1
CHCHD3-204ENST00000457942 TIMELESSQ9UNS1 1208 aa21.95■■□□□ 1.1
CHCHD3-204ENST00000457942 MAP3K19Q56UN5 1328 aa21.94■■□□□ 1.1
CHCHD3-204ENST00000457942 YBX3P16989 372 aaKnown RBP eCLIP21.93■■□□□ 1.1
CHCHD3-204ENST00000457942 SLC27A3Q5K4L6 730 aa21.93■■□□□ 1.1
CHCHD3-204ENST00000457942 MSL1Q68DK7 614 aa21.93■■□□□ 1.1
CHCHD3-204ENST00000457942 SLC16A10Q8TF71 515 aa21.93■■□□□ 1.1
CHCHD3-204ENST00000457942 GGNBP2Q9H3C7 697 aa21.92■■□□□ 1.1
CHCHD3-204ENST00000457942 LY75O60449 1722 aa21.92■■□□□ 1.1
CHCHD3-204ENST00000457942 NSD2O96028 1365 aa21.91■■□□□ 1.1
CHCHD3-204ENST00000457942 FBLN1P23142 703 aa21.91■■□□□ 1.1
CHCHD3-204ENST00000457942 HOXC9P31274 260 aa21.91■■□□□ 1.1
CHCHD3-204ENST00000457942 PRIM1P49642 420 aaKnown RBP21.91■■□□□ 1.1
CHCHD3-204ENST00000457942 IFFO2Q5TF58 517 aa21.91■■□□□ 1.1
CHCHD3-204ENST00000457942 RGPD2P0DJD1 1756 aa21.9■■□□□ 1.1
CHCHD3-204ENST00000457942 RRS1Q15050 365 aaKnown RBP21.89■■□□□ 1.09
CHCHD3-204ENST00000457942 ATP10DQ9P241 1426 aa21.89■■□□□ 1.09
CHCHD3-204ENST00000457942 RTL1A6NKG5 1358 aa21.88■■□□□ 1.09
CHCHD3-204ENST00000457942 FYB1O15117 783 aa21.88■■□□□ 1.09
CHCHD3-204ENST00000457942 POLR3GLQ9BT43 218 aa21.88■■□□□ 1.09
CHCHD3-204ENST00000457942 CCNL1Q9UK58 526 aaPredicted RBP21.88■■□□□ 1.09
CHCHD3-204ENST00000457942 MEGF6O75095 1541 aa21.88■■□□□ 1.09
CHCHD3-204ENST00000457942 CCER1Q8TC90 406 aaPredicted RBP21.87■■□□□ 1.09
CHCHD3-204ENST00000457942 SMG6Q86US8 1419 aaKnown RBP21.87■■□□□ 1.09
CHCHD3-204ENST00000457942 NSD3Q9BZ95 1437 aa21.86■■□□□ 1.09
CHCHD3-204ENST00000457942 ZNF526Q8TF50 670 aaPredicted RBP21.85■■□□□ 1.09
CHCHD3-204ENST00000457942 COL23A1Q86Y22 540 aaPredicted RBP21.84■■□□□ 1.09
CHCHD3-204ENST00000457942 WWC3Q9ULE0 1092 aa21.84■■□□□ 1.09
CHCHD3-204ENST00000457942 C5P01031 1676 aa21.84■■□□□ 1.09
CHCHD3-204ENST00000457942 GRIN3BO60391 1043 aa21.82■■□□□ 1.08
CHCHD3-204ENST00000457942 USHBP1Q8N6Y0 703 aa21.82■■□□□ 1.08
CHCHD3-204ENST00000457942 FLT4P35916 1363 aa21.8■■□□□ 1.08
CHCHD3-204ENST00000457942 ZCRB1Q8TBF4 217 aaKnown RBP21.8■■□□□ 1.08
CHCHD3-204ENST00000457942 CARD14Q9BXL6 1004 aa21.78■■□□□ 1.08
CHCHD3-204ENST00000457942 GPBP1L1Q9HC44 474 aaPredicted RBP21.78■■□□□ 1.08
CHCHD3-204ENST00000457942 EIF4G2P78344 907 aaKnown RBP eCLIP21.77■■□□□ 1.08
CHCHD3-204ENST00000457942 NBPF6Q5VWK0 638 aa21.77■■□□□ 1.08
CHCHD3-204ENST00000457942 RAPGEF4Q8WZA2 1011 aa21.77■■□□□ 1.08
CHCHD3-204ENST00000457942 NBPF4Q96M43 638 aa21.77■■□□□ 1.08
CHCHD3-204ENST00000457942 INSRP06213 1382 aa21.76■■□□□ 1.07
CHCHD3-204ENST00000457942 PPM1GO15355 546 aaPredicted RBP21.76■■□□□ 1.07
CHCHD3-204ENST00000457942 HSP90AB2PQ58FF8 381 aa21.76■■□□□ 1.07
CHCHD3-204ENST00000457942 CGNL1Q0VF96 1302 aa21.76■■□□□ 1.07
CHCHD3-204ENST00000457942 KIF24Q5T7B8 1368 aa21.75■■□□□ 1.07
CHCHD3-204ENST00000457942 TATP17735 454 aaPredicted RBP21.74■■□□□ 1.07
CHCHD3-204ENST00000457942 SMIM5Q71RC9 77 aa21.74■■□□□ 1.07
CHCHD3-204ENST00000457942 EMILIN1Q9Y6C2 1016 aa21.74■■□□□ 1.07
CHCHD3-204ENST00000457942 TOGARAM1Q9Y4F4 1720 aa21.73■■□□□ 1.07
CHCHD3-204ENST00000457942 HSPA5P11021 654 aaKnown RBP21.73■■□□□ 1.07
CHCHD3-204ENST00000457942 TAF1LQ8IZX4 1826 aa21.73■■□□□ 1.07
CHCHD3-204ENST00000457942 ADCY9O60503 1353 aa21.73■■□□□ 1.07
CHCHD3-204ENST00000457942 PALLDQ8WX93 1383 aa21.73■■□□□ 1.07
CHCHD3-204ENST00000457942 MAP2P11137 1827 aaKnown RBP21.72■■□□□ 1.07
CHCHD3-204ENST00000457942 PHF14O94880 888 aa21.72■■□□□ 1.07
CHCHD3-204ENST00000457942 C4BP0C0L5 1744 aa21.72■■□□□ 1.07
CHCHD3-204ENST00000457942 ANKRD26Q9UPS8 1709 aa21.72■■□□□ 1.07
CHCHD3-204ENST00000457942 AMIGO3Q86WK7 504 aa21.7■■□□□ 1.06
CHCHD3-204ENST00000457942 HSPA6P17066 643 aa21.69■■□□□ 1.06
CHCHD3-204ENST00000457942 MPRIPQ6WCQ1 1025 aa21.69■■□□□ 1.06
CHCHD3-204ENST00000457942 CD2APQ9Y5K6 639 aa21.69■■□□□ 1.06
CHCHD3-204ENST00000457942 IGSF1Q8N6C5 1336 aa21.69■■□□□ 1.06
CHCHD3-204ENST00000457942 AK7Q96M32 723 aa21.68■■□□□ 1.06
CHCHD3-204ENST00000457942 PCDH11XQ9BZA7 1347 aa21.68■■□□□ 1.06
CHCHD3-204ENST00000457942 PCDH11YQ9BZA8 1340 aa21.68■■□□□ 1.06
CHCHD3-204ENST00000457942 TNNT2P45379 298 aaPredicted RBP21.67■■□□□ 1.06
CHCHD3-204ENST00000457942 UBR3Q6ZT12 1888 aa21.64■■□□□ 1.06
CHCHD3-204ENST00000457942 ITGB4P16144 1822 aa21.64■■□□□ 1.05
CHCHD3-204ENST00000457942 PKD1L3Q7Z443 1732 aa21.63■■□□□ 1.05
CHCHD3-204ENST00000457942 FLAD1Q8NFF5 587 aa21.63■■□□□ 1.05
CHCHD3-204ENST00000457942 PANK3Q9H999 370 aa21.63■■□□□ 1.05
CHCHD3-204ENST00000457942 WASHC2AQ641Q2 1341 aa21.62■■□□□ 1.05
CHCHD3-204ENST00000457942 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.61■■□□□ 1.05
CHCHD3-204ENST00000457942 POLKQ9UBT6 870 aa21.61■■□□□ 1.05
CHCHD3-204ENST00000457942 CYP27B1O15528 508 aa21.6■■□□□ 1.05
CHCHD3-204ENST00000457942 SPG7Q9UQ90 795 aa21.59■■□□□ 1.05
CHCHD3-204ENST00000457942 KIF3CO14782 793 aa21.58■■□□□ 1.05
CHCHD3-204ENST00000457942 LINC00116Q8NCU8 138 aa21.58■■□□□ 1.05
CHCHD3-204ENST00000457942 EYA1Q99502 592 aa21.58■■□□□ 1.05
CHCHD3-204ENST00000457942 NCAPD2Q15021 1401 aa21.57■■□□□ 1.04
CHCHD3-204ENST00000457942 CICQ96RK0 1608 aaPredicted RBP21.56■■□□□ 1.04
CHCHD3-204ENST00000457942 PIGBQ92521 554 aa21.56■■□□□ 1.04
CHCHD3-204ENST00000457942 GNPATO15228 680 aa21.55■■□□□ 1.04
CHCHD3-204ENST00000457942 EIF4A2Q14240 407 aaKnown RBP21.55■■□□□ 1.04
CHCHD3-204ENST00000457942 MORC1Q86VD1 984 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms