RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 HSP90AB2PQ58FF8 381 aa12.18□□□□□ -0.46
PKP4-207ENST00000457109 LRRC4BQ9NT99 713 aa12.18□□□□□ -0.46
PKP4-207ENST00000457109 CCNL1Q9UK58 526 aaPredicted RBP12.18□□□□□ -0.46
PKP4-207ENST00000457109 CLSPNQ9HAW4 1339 aa12.17□□□□□ -0.46
PKP4-207ENST00000457109 GPR162Q16538 588 aa12.17□□□□□ -0.46
PKP4-207ENST00000457109 PCDH11XQ9BZA7 1347 aa12.16□□□□□ -0.46
PKP4-207ENST00000457109 PCDH11YQ9BZA8 1340 aa12.16□□□□□ -0.46
PKP4-207ENST00000457109 RGPD5Q99666 1765 aa12.16□□□□□ -0.46
PKP4-207ENST00000457109 ZNF827Q17R98 1081 aa12.16□□□□□ -0.46
PKP4-207ENST00000457109 AKT1S1Q96B36 256 aa12.16□□□□□ -0.46
PKP4-207ENST00000457109 SPG7Q9UQ90 795 aa12.16□□□□□ -0.46
PKP4-207ENST00000457109 INSRP06213 1382 aa12.16□□□□□ -0.46
PKP4-207ENST00000457109 FLT4P35916 1363 aa12.16□□□□□ -0.46
PKP4-207ENST00000457109 KIF24Q5T7B8 1368 aa12.16□□□□□ -0.46
PKP4-207ENST00000457109 RGPD3A6NKT7 1758 aaPredicted RBP12.15□□□□□ -0.46
PKP4-207ENST00000457109 RGPD4Q7Z3J3 1758 aa12.15□□□□□ -0.46
PKP4-207ENST00000457109 KCNQ4P56696 695 aa12.15□□□□□ -0.46
PKP4-207ENST00000457109 MPRIPQ6WCQ1 1025 aa12.15□□□□□ -0.46
PKP4-207ENST00000457109 PELP1Q8IZL8 1130 aaKnown RBP12.15□□□□□ -0.46
PKP4-207ENST00000457109 SMARCC1Q92922 1105 aaPredicted RBP12.15□□□□□ -0.46
PKP4-207ENST00000457109 EIF4G2P78344 907 aaKnown RBP eCLIP12.14□□□□□ -0.47
PKP4-207ENST00000457109 FLAD1Q8NFF5 587 aa12.14□□□□□ -0.47
PKP4-207ENST00000457109 CARD14Q9BXL6 1004 aa12.14□□□□□ -0.47
PKP4-207ENST00000457109 SBF2Q86WG5 1849 aa12.14□□□□□ -0.47
PKP4-207ENST00000457109 USP54Q70EL1 1684 aa12.13□□□□□ -0.47
PKP4-207ENST00000457109 CCER1Q8TC90 406 aaPredicted RBP12.13□□□□□ -0.47
PKP4-207ENST00000457109 EMILIN1Q9Y6C2 1016 aa12.13□□□□□ -0.47
PKP4-207ENST00000457109 LTN1O94822 1766 aa12.13□□□□□ -0.47
PKP4-207ENST00000457109 NSD3Q9BZ95 1437 aa12.12□□□□□ -0.47
PKP4-207ENST00000457109 SGIP1Q9BQI5 828 aa12.12□□□□□ -0.47
PKP4-207ENST00000457109 PNPLA7Q6ZV29 1317 aa12.11□□□□□ -0.47
PKP4-207ENST00000457109 WNK3Q9BYP7 1800 aa12.11□□□□□ -0.47
PKP4-207ENST00000457109 NHSQ6T4R5 1651 aa12.11□□□□□ -0.47
PKP4-207ENST00000457109 TNNT2P45379 298 aaPredicted RBP12.11□□□□□ -0.47
PKP4-207ENST00000457109 AK7Q96M32 723 aa12.11□□□□□ -0.47
PKP4-207ENST00000457109 WASHC2AQ641Q2 1341 aa12.11□□□□□ -0.47
PKP4-207ENST00000457109 MEGF6O75095 1541 aa12.1□□□□□ -0.47
PKP4-207ENST00000457109 COL23A1Q86Y22 540 aaPredicted RBP12.09□□□□□ -0.47
PKP4-207ENST00000457109 IFNL2Q8IZJ0 200 aa12.09□□□□□ -0.47
PKP4-207ENST00000457109 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.09□□□□□ -0.477e-9■□□□□ 10.5
PKP4-207ENST00000457109 TMOD3Q9NYL9 352 aa12.09□□□□□ -0.47
PKP4-207ENST00000457109 KAT6BQ8WYB5 2073 aa12.09□□□□□ -0.47
PKP4-207ENST00000457109 PALLDQ8WX93 1383 aa12.08□□□□□ -0.48
PKP4-207ENST00000457109 FAM208AQ9UK61 1670 aaKnown RBP12.08□□□□□ -0.48
PKP4-207ENST00000457109 CYP27B1O15528 508 aa12.08□□□□□ -0.48
PKP4-207ENST00000457109 GRIN3BO60391 1043 aa12.08□□□□□ -0.48
PKP4-207ENST00000457109 EYA1Q99502 592 aa12.08□□□□□ -0.48
PKP4-207ENST00000457109 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
PKP4-207ENST00000457109 MAP3K5Q99683 1374 aa12.07□□□□□ -0.48
PKP4-207ENST00000457109 NKX1-1Q15270 411 aaPredicted RBP12.07□□□□□ -0.48
PKP4-207ENST00000457109 MORC1Q86VD1 984 aa12.07□□□□□ -0.48
PKP4-207ENST00000457109 ZNF784Q8NCA9 323 aaPredicted RBP12.07□□□□□ -0.48
PKP4-207ENST00000457109 PIGBQ92521 554 aa12.07□□□□□ -0.48
PKP4-207ENST00000457109 PANK3Q9H999 370 aa12.07□□□□□ -0.48
PKP4-207ENST00000457109 CASZ1Q86V15 1759 aa12.07□□□□□ -0.48
PKP4-207ENST00000457109 NSD2O96028 1365 aa12.06□□□□□ -0.48
PKP4-207ENST00000457109 HSP90AB1P08238 724 aaKnown RBP12.06□□□□□ -0.48
PKP4-207ENST00000457109 HSPA5P11021 654 aaKnown RBP12.06□□□□□ -0.48
PKP4-207ENST00000457109 PLEKHO1Q53GL0 409 aaPredicted RBP12.06□□□□□ -0.48
PKP4-207ENST00000457109 MSL1Q68DK7 614 aa12.06□□□□□ -0.48
PKP4-207ENST00000457109 KNSTRNQ9Y448 316 aa12.06□□□□□ -0.48
PKP4-207ENST00000457109 BTAF1O14981 1849 aa12.05□□□□□ -0.48
PKP4-207ENST00000457109 PHF14O94880 888 aa12.05□□□□□ -0.48
PKP4-207ENST00000457109 LOC102724428A0A0B4J2F2 783 aa12.04□□□□□ -0.48
PKP4-207ENST00000457109 PHKG2P15735 406 aa12.04□□□□□ -0.48
PKP4-207ENST00000457109 ATP6V1AP38606 617 aa12.04□□□□□ -0.48
PKP4-207ENST00000457109 SIK1P57059 783 aa12.04□□□□□ -0.48
PKP4-207ENST00000457109 EIF4A2Q14240 407 aaKnown RBP12.04□□□□□ -0.48
PKP4-207ENST00000457109 AMOTQ4VCS5 1084 aa12.04□□□□□ -0.48
PKP4-207ENST00000457109 CD2APQ9Y5K6 639 aa12.04□□□□□ -0.48
PKP4-207ENST00000457109 MYOM1P52179 1685 aa12.03□□□□□ -0.48
PKP4-207ENST00000457109 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.03□□□□□ -0.48
PKP4-207ENST00000457109 C1orf141Q5JVX7 400 aa12.03□□□□□ -0.48
PKP4-207ENST00000457109 NLGN2Q8NFZ4 835 aa12.03□□□□□ -0.48
PKP4-207ENST00000457109 ERVV-2B6SEH9 535 aa12.02□□□□□ -0.49
PKP4-207ENST00000457109 SSFA2P28290 1259 aa12.02□□□□□ -0.49
PKP4-207ENST00000457109 CABP4P57796 275 aa12.02□□□□□ -0.49
PKP4-207ENST00000457109 DCAF5Q96JK2 942 aa12.02□□□□□ -0.49
PKP4-207ENST00000457109 RBM42Q9BTD8 480 aaKnown RBP12.02□□□□□ -0.49
PKP4-207ENST00000457109 ASAP1Q9ULH1 1129 aa12.02□□□□□ -0.49
PKP4-207ENST00000457109 GNPATO15228 680 aa12.01□□□□□ -0.49
PKP4-207ENST00000457109 ZNF530Q6P9A1 599 aaPredicted RBP12.01□□□□□ -0.49
PKP4-207ENST00000457109 PAPPAQ13219 1627 aa12□□□□□ -0.49
PKP4-207ENST00000457109 MTHFSP49914 203 aa12□□□□□ -0.49
PKP4-207ENST00000457109 TRAPPC3LQ5T215 181 aa12□□□□□ -0.49
PKP4-207ENST00000457109 RTCBQ9Y3I0 505 aaKnown RBP12□□□□□ -0.49
PKP4-207ENST00000457109 GIGYF1O75420 1035 aaPredicted RBP11.99□□□□□ -0.49
PKP4-207ENST00000457109 ATG3Q9NT62 314 aa11.99□□□□□ -0.49
PKP4-207ENST00000457109 DOT1LQ8TEK3 1739 aa11.98□□□□□ -0.49
PKP4-207ENST00000457109 NLGN1Q8N2Q7 840 aa11.98□□□□□ -0.49
PKP4-207ENST00000457109 LINC00116Q8NCU8 138 aa11.98□□□□□ -0.49
PKP4-207ENST00000457109 PLEKHG2Q9H7P9 1386 aa11.97□□□□□ -0.49
PKP4-207ENST00000457109 IGSF1Q8N6C5 1336 aa11.97□□□□□ -0.49
PKP4-207ENST00000457109 SENP3-EIF4A1A0A087X0R7 540 aa11.97□□□□□ -0.49
PKP4-207ENST00000457109 RFC4P35249 363 aa11.97□□□□□ -0.49
PKP4-207ENST00000457109 C1QTNF8P60827 252 aa11.97□□□□□ -0.49
PKP4-207ENST00000457109 SULT6B1Q6IMI4 303 aa11.97□□□□□ -0.49
PKP4-207ENST00000457109 KIF20BQ96Q89 1820 aa11.96□□□□□ -0.49
PKP4-207ENST00000457109 YBX3P16989 372 aaKnown RBP eCLIP11.96□□□□□ -0.497e-9■□□□□ 8.1
PKP4-207ENST00000457109 ITPK1Q13572 414 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms