RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 DOT1LQ8TEK3 1739 aa22.23■■□□□ 1.15
CPSF6-203ENST00000456847 BTAF1O14981 1849 aa22.22■■□□□ 1.15
CPSF6-203ENST00000456847 PLSCR1O15162 318 aa22.22■■□□□ 1.15
CPSF6-203ENST00000456847 NBPF14Q5TI25 921 aa22.22■■□□□ 1.15
CPSF6-203ENST00000456847 KCNQ2O43526 872 aa22.21■■□□□ 1.15
CPSF6-203ENST00000456847 TATP17735 454 aaPredicted RBP22.21■■□□□ 1.15
CPSF6-203ENST00000456847 ZCRB1Q8TBF4 217 aaKnown RBP22.21■■□□□ 1.15
CPSF6-203ENST00000456847 POLKQ9UBT6 870 aa22.21■■□□□ 1.15
CPSF6-203ENST00000456847 MORC1Q86VD1 984 aa22.21■■□□□ 1.15
CPSF6-203ENST00000456847 WASHC2AQ641Q2 1341 aa22.21■■□□□ 1.15
CPSF6-203ENST00000456847 LRP5O75197 1615 aa22.19■■□□□ 1.14
CPSF6-203ENST00000456847 PKD1L3Q7Z443 1732 aa22.16■■□□□ 1.14
CPSF6-203ENST00000456847 SYTL4Q96C24 671 aaPredicted RBP22.15■■□□□ 1.14
CPSF6-203ENST00000456847 TXNRD1Q16881 649 aa22.14■■□□□ 1.14
CPSF6-203ENST00000456847 PCDH11XQ9BZA7 1347 aa22.14■■□□□ 1.14
CPSF6-203ENST00000456847 PCDH11YQ9BZA8 1340 aa22.14■■□□□ 1.14
CPSF6-203ENST00000456847 NCAPD2Q15021 1401 aa22.14■■□□□ 1.13
CPSF6-203ENST00000456847 EIF4A2Q14240 407 aaKnown RBP22.13■■□□□ 1.13
CPSF6-203ENST00000456847 EYA1Q99502 592 aa22.13■■□□□ 1.13
CPSF6-203ENST00000456847 AMER1Q5JTC6 1135 aaPredicted RBP22.12■■□□□ 1.13
CPSF6-203ENST00000456847 PROM2Q8N271 834 aa22.11■■□□□ 1.13
CPSF6-203ENST00000456847 ANO8Q9HCE9 1232 aaPredicted RBP22.1■■□□□ 1.13
CPSF6-203ENST00000456847 PRIM1P49642 420 aaKnown RBP22.1■■□□□ 1.13
CPSF6-203ENST00000456847 CC2D1BQ5T0F9 858 aaKnown RBP22.08■■□□□ 1.12
CPSF6-203ENST00000456847 STK32BQ9NY57 414 aa22.08■■□□□ 1.12
CPSF6-203ENST00000456847 SPG7Q9UQ90 795 aa22.08■■□□□ 1.12
CPSF6-203ENST00000456847 TOGARAM1Q9Y4F4 1720 aa22.06■■□□□ 1.12
CPSF6-203ENST00000456847 CNGB1Q14028 1251 aaPredicted RBP22.06■■□□□ 1.12
CPSF6-203ENST00000456847 PER1O15534 1290 aaPredicted RBP22.06■■□□□ 1.12
CPSF6-203ENST00000456847 PAPPAQ13219 1627 aa22.06■■□□□ 1.12
CPSF6-203ENST00000456847 IGSF1Q8N6C5 1336 aa22.05■■□□□ 1.12
CPSF6-203ENST00000456847 LY75O60449 1722 aa22.05■■□□□ 1.12
CPSF6-203ENST00000456847 CYP27B1O15528 508 aa22.05■■□□□ 1.12
CPSF6-203ENST00000456847 CASZ1Q86V15 1759 aa22.05■■□□□ 1.12
CPSF6-203ENST00000456847 ITGB4P16144 1822 aa22.04■■□□□ 1.12
CPSF6-203ENST00000456847 SLC15A2Q16348 729 aa22.02■■□□□ 1.11
CPSF6-203ENST00000456847 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.01■■□□□ 1.112e-8■■■□□ 17.9
CPSF6-203ENST00000456847 SLC27A3Q5K4L6 730 aa22■■□□□ 1.11
CPSF6-203ENST00000456847 NPC1L1Q9UHC9 1359 aa22■■□□□ 1.11
CPSF6-203ENST00000456847 MTHFSP49914 203 aa22■■□□□ 1.11
CPSF6-203ENST00000456847 PLEKHG2Q9H7P9 1386 aa21.99■■□□□ 1.11
CPSF6-203ENST00000456847 MPRIPQ6WCQ1 1025 aa21.99■■□□□ 1.11
CPSF6-203ENST00000456847 LRRC4BQ9NT99 713 aa21.99■■□□□ 1.11
CPSF6-203ENST00000456847 IFNL2Q8IZJ0 200 aa21.98■■□□□ 1.11
CPSF6-203ENST00000456847 SPON1Q9HCB6 807 aa21.98■■□□□ 1.11
CPSF6-203ENST00000456847 PHKG2P15735 406 aa21.97■■□□□ 1.11
CPSF6-203ENST00000456847 IL13P35225 146 aa21.96■■□□□ 1.11
CPSF6-203ENST00000456847 NKX1-1Q15270 411 aaPredicted RBP21.96■■□□□ 1.11
CPSF6-203ENST00000456847 AEBP1Q8IUX7 1158 aa21.96■■□□□ 1.11
CPSF6-203ENST00000456847 CCNL1Q9UK58 526 aaPredicted RBP21.96■■□□□ 1.11
CPSF6-203ENST00000456847 KCNQ4P56696 695 aa21.96■■□□□ 1.11
CPSF6-203ENST00000456847 PLEKHO1Q53GL0 409 aaPredicted RBP21.96■■□□□ 1.11
CPSF6-203ENST00000456847 SULT6B1Q6IMI4 303 aa21.96■■□□□ 1.11
CPSF6-203ENST00000456847 QSER1Q2KHR3 1735 aa21.95■■□□□ 1.1
CPSF6-203ENST00000456847 ZNF827Q17R98 1081 aa21.95■■□□□ 1.1
CPSF6-203ENST00000456847 PDGFDQ9GZP0 370 aaPredicted RBP21.95■■□□□ 1.1
CPSF6-203ENST00000456847 PPP1R1BQ9UD71 204 aaPredicted RBP21.95■■□□□ 1.1
CPSF6-203ENST00000456847 TUBGCP6Q96RT7 1819 aa21.95■■□□□ 1.1
CPSF6-203ENST00000456847 C5P01031 1676 aa21.95■■□□□ 1.1
CPSF6-203ENST00000456847 PALLDQ8WX93 1383 aa21.94■■□□□ 1.1
CPSF6-203ENST00000456847 ZBTB7AO95365 584 aa21.94■■□□□ 1.1
CPSF6-203ENST00000456847 ZNF530Q6P9A1 599 aaPredicted RBP21.93■■□□□ 1.1
CPSF6-203ENST00000456847 TMOD3Q9NYL9 352 aa21.93■■□□□ 1.1
CPSF6-203ENST00000456847 AMOTQ4VCS5 1084 aa21.92■■□□□ 1.1
CPSF6-203ENST00000456847 KDRP35968 1356 aa21.92■■□□□ 1.1
CPSF6-203ENST00000456847 DIAPH1O60610 1272 aaKnown RBP21.92■■□□□ 1.1
CPSF6-203ENST00000456847 SMARCC1Q92922 1105 aaPredicted RBP21.92■■□□□ 1.1
CPSF6-203ENST00000456847 SRCAPQ6ZRS2 3230 aa21.91■■□□□ 1.1
CPSF6-203ENST00000456847 TAF1LQ8IZX4 1826 aa21.91■■□□□ 1.1
CPSF6-203ENST00000456847 PIGBQ92521 554 aa21.91■■□□□ 1.1
CPSF6-203ENST00000456847 HSP90AB1P08238 724 aaKnown RBP21.9■■□□□ 1.1
CPSF6-203ENST00000456847 C1orf141Q5JVX7 400 aa21.9■■□□□ 1.1
CPSF6-203ENST00000456847 AKT1S1Q96B36 256 aa21.9■■□□□ 1.1
CPSF6-203ENST00000456847 TFCP2L1Q9NZI6 479 aa21.89■■□□□ 1.09
CPSF6-203ENST00000456847 ATF5Q9Y2D1 282 aaPredicted RBP21.89■■□□□ 1.09
CPSF6-203ENST00000456847 HMOX1P09601 288 aa21.88■■□□□ 1.09
CPSF6-203ENST00000456847 COL3A1P02461 1466 aaPredicted RBP21.88■■□□□ 1.09
CPSF6-203ENST00000456847 DCAF5Q96JK2 942 aa21.87■■□□□ 1.09
CPSF6-203ENST00000456847 MTFR1LQ9H019 292 aa21.87■■□□□ 1.09
CPSF6-203ENST00000456847 KDM6AO15550 1401 aaPredicted RBP21.86■■□□□ 1.09
CPSF6-203ENST00000456847 HMGB2P26583 209 aaKnown RBP21.86■■□□□ 1.09
CPSF6-203ENST00000456847 U2SURPO15042 1029 aaKnown RBP21.85■■□□□ 1.09
CPSF6-203ENST00000456847 CFAP53Q96M91 514 aa21.85■■□□□ 1.09
CPSF6-203ENST00000456847 C4BP0C0L5 1744 aa21.85■■□□□ 1.09
CPSF6-203ENST00000456847 PNPLA7Q6ZV29 1317 aa21.85■■□□□ 1.09
CPSF6-203ENST00000456847 VIRMAQ69YN4 1812 aaKnown RBP21.85■■□□□ 1.09
CPSF6-203ENST00000456847 SCN11AQ9UI33 1791 aa21.84■■□□□ 1.09
CPSF6-203ENST00000456847 ERVV-2B6SEH9 535 aa21.84■■□□□ 1.09
CPSF6-203ENST00000456847 CABP4P57796 275 aa21.83■■□□□ 1.09
CPSF6-203ENST00000456847 ASAP1Q9ULH1 1129 aa21.83■■□□□ 1.09
CPSF6-203ENST00000456847 MSH5O43196 834 aa21.82■■□□□ 1.08
CPSF6-203ENST00000456847 PTGER2P43116 358 aa21.82■■□□□ 1.08
CPSF6-203ENST00000456847 LOC102724428A0A0B4J2F2 783 aa21.81■■□□□ 1.08
CPSF6-203ENST00000456847 SIK1P57059 783 aa21.81■■□□□ 1.08
CPSF6-203ENST00000456847 PPP2R1AP30153 589 aa21.8■■□□□ 1.08
CPSF6-203ENST00000456847 AKAP4Q5JQC9 854 aa21.8■■□□□ 1.08
CPSF6-203ENST00000456847 AK7Q96M32 723 aa21.8■■□□□ 1.08
CPSF6-203ENST00000456847 ATG3Q9NT62 314 aa21.8■■□□□ 1.08
CPSF6-203ENST00000456847 SLC16A10Q8TF71 515 aa21.8■■□□□ 1.08
CPSF6-203ENST00000456847 UBR3Q6ZT12 1888 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms