RNA–Protein interactions for RNA: ENST00000456433.5

PMPCB-206, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-206ENST00000456433 EXOC5O00471 708 aa22.9■■□□□ 1.26
PMPCB-206ENST00000456433 SULT6B1Q6IMI4 303 aa22.9■■□□□ 1.26
PMPCB-206ENST00000456433 AEBP1Q8IUX7 1158 aa22.89■■□□□ 1.25
PMPCB-206ENST00000456433 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.89■■□□□ 1.255e-7■■□□□ 12.8
PMPCB-206ENST00000456433 PDE3BQ13370 1112 aa22.88■■□□□ 1.25
PMPCB-206ENST00000456433 BCL9O00512 1426 aa22.88■■□□□ 1.25
PMPCB-206ENST00000456433 U2SURPO15042 1029 aaKnown RBP22.87■■□□□ 1.25
PMPCB-206ENST00000456433 ZCRB1Q8TBF4 217 aaKnown RBP22.87■■□□□ 1.25
PMPCB-206ENST00000456433 HMOX1P09601 288 aa22.84■■□□□ 1.25
PMPCB-206ENST00000456433 MARCH10Q8NA82 808 aaPredicted RBP22.84■■□□□ 1.25
PMPCB-206ENST00000456433 PCDH11XQ9BZA7 1347 aa22.83■■□□□ 1.25
PMPCB-206ENST00000456433 PCDH11YQ9BZA8 1340 aa22.83■■□□□ 1.25
PMPCB-206ENST00000456433 U2AF1L5P0DN76 240 aaPredicted RBP22.83■■□□□ 1.25
PMPCB-206ENST00000456433 U2AF1Q01081 240 aaKnown RBP eCLIP22.83■■□□□ 1.25
PMPCB-206ENST00000456433 DIEXFQ68CQ4 756 aaKnown RBP22.83■■□□□ 1.25
PMPCB-206ENST00000456433 RSPH6AQ9H0K4 717 aa22.83■■□□□ 1.25
PMPCB-206ENST00000456433 SPG7Q9UQ90 795 aa22.83■■□□□ 1.25
PMPCB-206ENST00000456433 FCHSD2O94868 740 aa22.82■■□□□ 1.24
PMPCB-206ENST00000456433 AMOTQ4VCS5 1084 aa22.82■■□□□ 1.24
PMPCB-206ENST00000456433 PLEKHO1Q53GL0 409 aaPredicted RBP22.81■■□□□ 1.24
PMPCB-206ENST00000456433 FAM196AQ6ZSG2 479 aa22.81■■□□□ 1.24
PMPCB-206ENST00000456433 SBF2Q86WG5 1849 aa22.8■■□□□ 1.24
PMPCB-206ENST00000456433 CYP27B1O15528 508 aa22.78■■□□□ 1.24
PMPCB-206ENST00000456433 CCDC184Q52MB2 194 aa22.77■■□□□ 1.24
PMPCB-206ENST00000456433 FAM182BQ5T319 152 aa22.77■■□□□ 1.24
PMPCB-206ENST00000456433 DDX54Q8TDD1 881 aaKnown RBP22.77■■□□□ 1.24
PMPCB-206ENST00000456433 PRKAR2BP31323 418 aa22.76■■□□□ 1.23
PMPCB-206ENST00000456433 NKX1-1Q15270 411 aaPredicted RBP22.76■■□□□ 1.23
PMPCB-206ENST00000456433 PHKG2P15735 406 aa22.75■■□□□ 1.23
PMPCB-206ENST00000456433 WDR43Q15061 677 aaKnown RBP eCLIP22.75■■□□□ 1.23
PMPCB-206ENST00000456433 IFNL2Q8IZJ0 200 aa22.75■■□□□ 1.23
PMPCB-206ENST00000456433 PNNQ9H307 717 aaKnown RBP22.75■■□□□ 1.23
PMPCB-206ENST00000456433 NHSQ6T4R5 1651 aa22.74■■□□□ 1.23
PMPCB-206ENST00000456433 MRS2Q9HD23 443 aa22.74■■□□□ 1.23
PMPCB-206ENST00000456433 ZNF530Q6P9A1 599 aaPredicted RBP22.73■■□□□ 1.23
PMPCB-206ENST00000456433 PLEKHF1Q96S99 279 aa22.73■■□□□ 1.23
PMPCB-206ENST00000456433 KAT6BQ8WYB5 2073 aa22.73■■□□□ 1.23
PMPCB-206ENST00000456433 DOT1LQ8TEK3 1739 aa22.73■■□□□ 1.23
PMPCB-206ENST00000456433 TNS1Q9HBL0 1735 aaKnown RBP22.72■■□□□ 1.23
PMPCB-206ENST00000456433 MTHFSDQ2M296 383 aaKnown RBP22.72■■□□□ 1.23
PMPCB-206ENST00000456433 GAS2L2Q8NHY3 880 aa22.72■■□□□ 1.23
PMPCB-206ENST00000456433 TOGARAM1Q9Y4F4 1720 aa22.71■■□□□ 1.23
PMPCB-206ENST00000456433 CCER2I3L3R5 266 aa22.71■■□□□ 1.23
PMPCB-206ENST00000456433 HSP90AB1P08238 724 aaKnown RBP22.71■■□□□ 1.23
PMPCB-206ENST00000456433 CCDC125Q86Z20 511 aa22.71■■□□□ 1.23
PMPCB-206ENST00000456433 PNISRQ8TF01 805 aaKnown RBP22.71■■□□□ 1.23
PMPCB-206ENST00000456433 PHACTR3Q96KR7 559 aa22.71■■□□□ 1.23
PMPCB-206ENST00000456433 ADAMTS7Q9UKP4 1686 aa22.71■■□□□ 1.23
PMPCB-206ENST00000456433 AKAP4Q5JQC9 854 aa22.7■■□□□ 1.22
PMPCB-206ENST00000456433 UPF1Q92900 1129 aaKnown RBP eCLIP22.7■■□□□ 1.22
PMPCB-206ENST00000456433 ADAMTS8Q9UP79 889 aa22.7■■□□□ 1.22
PMPCB-206ENST00000456433 C1orf141Q5JVX7 400 aa22.69■■□□□ 1.22
PMPCB-206ENST00000456433 SCN11AQ9UI33 1791 aa22.68■■□□□ 1.22
PMPCB-206ENST00000456433 NEFMP07197 916 aa22.68■■□□□ 1.22
PMPCB-206ENST00000456433 VIRMAQ69YN4 1812 aaKnown RBP22.68■■□□□ 1.22
PMPCB-206ENST00000456433 KDM6AO15550 1401 aaPredicted RBP22.67■■□□□ 1.22
PMPCB-206ENST00000456433 ITGB4P16144 1822 aa22.67■■□□□ 1.22
PMPCB-206ENST00000456433 DCAF5Q96JK2 942 aa22.67■■□□□ 1.22
PMPCB-206ENST00000456433 BCL11BQ9C0K0 894 aaPredicted RBP22.67■■□□□ 1.22
PMPCB-206ENST00000456433 TRIM37O94972 964 aa22.66■■□□□ 1.22
PMPCB-206ENST00000456433 MAP3K5Q99683 1374 aa22.65■■□□□ 1.22
PMPCB-206ENST00000456433 DLG5Q8TDM6 1919 aa22.65■■□□□ 1.22
PMPCB-206ENST00000456433 MAPK8IP3Q9UPT6 1336 aa22.65■■□□□ 1.22
PMPCB-206ENST00000456433 RUNDC1Q96C34 613 aa22.65■■□□□ 1.22
PMPCB-206ENST00000456433 BTAF1O14981 1849 aa22.64■■□□□ 1.22
PMPCB-206ENST00000456433 RGPD3A6NKT7 1758 aaPredicted RBP22.64■■□□□ 1.22
PMPCB-206ENST00000456433 RGPD4Q7Z3J3 1758 aa22.64■■□□□ 1.22
PMPCB-206ENST00000456433 MRC1P22897 1456 aa22.63■■□□□ 1.21
PMPCB-206ENST00000456433 GNAT3A8MTJ3 354 aa22.63■■□□□ 1.21
PMPCB-206ENST00000456433 ERVV-2B6SEH9 535 aa22.63■■□□□ 1.21
PMPCB-206ENST00000456433 ACSBG1Q96GR2 724 aa22.63■■□□□ 1.21
PMPCB-206ENST00000456433 KCNQ2O43526 872 aa22.62■■□□□ 1.21
PMPCB-206ENST00000456433 PRIM1P49642 420 aaKnown RBP22.62■■□□□ 1.21
PMPCB-206ENST00000456433 NFE2L2Q16236 605 aa22.62■■□□□ 1.21
PMPCB-206ENST00000456433 MIER1Q8N108 512 aa22.62■■□□□ 1.21
PMPCB-206ENST00000456433 HTATSF1O43719 755 aaKnown RBP22.61■■□□□ 1.21
PMPCB-206ENST00000456433 MPRIPQ6WCQ1 1025 aa22.61■■□□□ 1.21
PMPCB-206ENST00000456433 RNMTO43148 476 aaKnown RBP22.6■■□□□ 1.21
PMPCB-206ENST00000456433 SF3B2Q13435 895 aaKnown RBP22.6■■□□□ 1.21
PMPCB-206ENST00000456433 PTF1AQ7RTS3 328 aa22.6■■□□□ 1.21
PMPCB-206ENST00000456433 CEMIPQ8WUJ3 1361 aa22.6■■□□□ 1.21
PMPCB-206ENST00000456433 CCDC146Q8IYE0 955 aa22.59■■□□□ 1.21
PMPCB-206ENST00000456433 PLSCR1O15162 318 aa22.57■■□□□ 1.2
PMPCB-206ENST00000456433 TMPOP42166 694 aaKnown RBP22.57■■□□□ 1.2
PMPCB-206ENST00000456433 BAG6P46379 1132 aa22.57■■□□□ 1.2
PMPCB-206ENST00000456433 SYTL4Q96C24 671 aaPredicted RBP22.57■■□□□ 1.2
PMPCB-206ENST00000456433 LGR6Q9HBX8 967 aa22.57■■□□□ 1.2
PMPCB-206ENST00000456433 SIPA1L3O60292 1781 aaPredicted RBP22.57■■□□□ 1.2
PMPCB-206ENST00000456433 APBA3O96018 575 aa22.56■■□□□ 1.2
PMPCB-206ENST00000456433 IL17REQ8NFR9 667 aa22.56■■□□□ 1.2
PMPCB-206ENST00000456433 TMOD3Q9NYL9 352 aa22.56■■□□□ 1.2
PMPCB-206ENST00000456433 PIGBQ92521 554 aa22.55■■□□□ 1.2
PMPCB-206ENST00000456433 SLC52A2Q9HAB3 445 aa22.55■■□□□ 1.2
PMPCB-206ENST00000456433 LY75O60449 1722 aa22.54■■□□□ 1.2
PMPCB-206ENST00000456433 CABP4P57796 275 aa22.54■■□□□ 1.2
PMPCB-206ENST00000456433 RTF1Q92541 710 aaKnown RBP22.54■■□□□ 1.2
PMPCB-206ENST00000456433 RIPK4P57078 832 aa22.53■■□□□ 1.2
PMPCB-206ENST00000456433 LMOD3Q0VAK6 560 aa22.53■■□□□ 1.2
PMPCB-206ENST00000456433 PAPPAQ13219 1627 aa22.53■■□□□ 1.2
PMPCB-206ENST00000456433 RREB1Q92766 1687 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms