RNA–Protein interactions for RNA: ENST00000455539.5

ICA1-213, Transcript of islet cell autoantigen 1, humanhuman

TSL 1 (best)

Gene ICA1, Length 1,956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ICA1-213ENST00000455539 NFAT5O94916 1531 aa16.66■□□□□ 0.26
ICA1-213ENST00000455539 UTRNP46939 3433 aa16.66■□□□□ 0.26
ICA1-213ENST00000455539 KLRG1Q96E93 195 aa16.66■□□□□ 0.26
ICA1-213ENST00000455539 KAT6BQ8WYB5 2073 aa16.65■□□□□ 0.26
ICA1-213ENST00000455539 IL2RBP14784 551 aa16.65■□□□□ 0.26
ICA1-213ENST00000455539 SRPK2P78362 688 aaKnown RBP16.65■□□□□ 0.26
ICA1-213ENST00000455539 COL23A1Q86Y22 540 aaPredicted RBP16.65■□□□□ 0.26
ICA1-213ENST00000455539 KIAA1210Q9ULL0 1709 aa16.63■□□□□ 0.25
ICA1-213ENST00000455539 CABP2Q9NPB3 220 aa16.62■□□□□ 0.25
ICA1-213ENST00000455539 MSL1Q68DK7 614 aa16.62■□□□□ 0.25
ICA1-213ENST00000455539 KCNQ4P56696 695 aa16.61■□□□□ 0.25
ICA1-213ENST00000455539 CABP1Q9NZU7 370 aa16.61■□□□□ 0.25
ICA1-213ENST00000455539 DOT1LQ8TEK3 1739 aa16.6■□□□□ 0.25
ICA1-213ENST00000455539 IGSF1Q8N6C5 1336 aa16.6■□□□□ 0.25
ICA1-213ENST00000455539 RBM46Q8TBY0 533 aaKnown RBP16.6■□□□□ 0.25
ICA1-213ENST00000455539 NLRP2Q9NX02 1062 aa16.6■□□□□ 0.25
ICA1-213ENST00000455539 TTC21BQ7Z4L5 1316 aa16.59■□□□□ 0.25
ICA1-213ENST00000455539 ERBB3P21860 1342 aa16.59■□□□□ 0.25
ICA1-213ENST00000455539 SOX12O15370 315 aa16.58■□□□□ 0.25
ICA1-213ENST00000455539 NSD2O96028 1365 aa16.58■□□□□ 0.25
ICA1-213ENST00000455539 ANKRD36BQ8N2N9 1353 aa16.58■□□□□ 0.25
ICA1-213ENST00000455539 TTC21AQ8NDW8 1320 aa16.58■□□□□ 0.24
ICA1-213ENST00000455539 CCNL1Q9UK58 526 aaPredicted RBP16.58■□□□□ 0.24
ICA1-213ENST00000455539 ZNF219Q9P2Y4 722 aaPredicted RBP16.57■□□□□ 0.24
ICA1-213ENST00000455539 USP54Q70EL1 1684 aa16.57■□□□□ 0.24
ICA1-213ENST00000455539 C5P01031 1676 aa16.56■□□□□ 0.24
ICA1-213ENST00000455539 FLAD1Q8NFF5 587 aa16.56■□□□□ 0.24
ICA1-213ENST00000455539 CENPJQ9HC77 1338 aaPredicted RBP16.56■□□□□ 0.24
ICA1-213ENST00000455539 WWC3Q9ULE0 1092 aa16.55■□□□□ 0.24
ICA1-213ENST00000455539 PRIM1P49642 420 aaKnown RBP16.55■□□□□ 0.24
ICA1-213ENST00000455539 FSTL1Q12841 308 aa16.55■□□□□ 0.24
ICA1-213ENST00000455539 ZNF692Q9BU19 519 aaPredicted RBP16.55■□□□□ 0.24
ICA1-213ENST00000455539 LTN1O94822 1766 aa16.54■□□□□ 0.24
ICA1-213ENST00000455539 HTRA3P83110 453 aa16.54■□□□□ 0.24
ICA1-213ENST00000455539 DDX54Q8TDD1 881 aaKnown RBP16.53■□□□□ 0.24
ICA1-213ENST00000455539 NMRK2Q9NPI5 230 aa16.53■□□□□ 0.24
ICA1-213ENST00000455539 HMGB2P26583 209 aaKnown RBP16.53■□□□□ 0.24
ICA1-213ENST00000455539 ANKRD24Q8TF21 1146 aa16.53■□□□□ 0.24
ICA1-213ENST00000455539 SYTL4Q96C24 671 aaPredicted RBP16.53■□□□□ 0.24
ICA1-213ENST00000455539 FAM208AQ9UK61 1670 aaKnown RBP16.52■□□□□ 0.24
ICA1-213ENST00000455539 TAF1LQ8IZX4 1826 aa16.52■□□□□ 0.23
ICA1-213ENST00000455539 C16orf71Q8IYS4 520 aaPredicted RBP16.51■□□□□ 0.23
ICA1-213ENST00000455539 USP31Q70CQ4 1352 aa16.5■□□□□ 0.23
ICA1-213ENST00000455539 PCDH10Q9P2E7 1040 aa16.49■□□□□ 0.23
ICA1-213ENST00000455539 USP47Q96K76 1375 aa16.49■□□□□ 0.23
ICA1-213ENST00000455539 C10orf71Q711Q0 1435 aa16.49■□□□□ 0.23
ICA1-213ENST00000455539 MON2Q7Z3U7 1717 aa16.49■□□□□ 0.23
ICA1-213ENST00000455539 KIAA1551Q9HCM1 1747 aa16.49■□□□□ 0.23
ICA1-213ENST00000455539 HSPA1AP0DMV8 641 aaKnown RBP16.48■□□□□ 0.23
ICA1-213ENST00000455539 HSPA1BP0DMV9 641 aaKnown RBP16.48■□□□□ 0.23
ICA1-213ENST00000455539 TOGARAM1Q9Y4F4 1720 aa16.48■□□□□ 0.23
ICA1-213ENST00000455539 KIF13BQ9NQT8 1826 aa16.47■□□□□ 0.23
ICA1-213ENST00000455539 NBPF1Q3BBV0 1214 aa16.46■□□□□ 0.23
ICA1-213ENST00000455539 C4BP0C0L5 1744 aa16.46■□□□□ 0.23
ICA1-213ENST00000455539 PLEKHG2Q9H7P9 1386 aa16.46■□□□□ 0.22
ICA1-213ENST00000455539 UBR3Q6ZT12 1888 aa16.45■□□□□ 0.22
ICA1-213ENST00000455539 PKD1L3Q7Z443 1732 aa16.45■□□□□ 0.22
ICA1-213ENST00000455539 EVC2Q86UK5 1308 aa16.45■□□□□ 0.22
ICA1-213ENST00000455539 PXDNLA1KZ92 1463 aa16.45■□□□□ 0.22
ICA1-213ENST00000455539 KTN1Q86UP2 1357 aaKnown RBP16.44■□□□□ 0.22
ICA1-213ENST00000455539 NSD3Q9BZ95 1437 aa16.44■□□□□ 0.22
ICA1-213ENST00000455539 TNRC6CQ9HCJ0 1690 aaKnown RBP16.43■□□□□ 0.22
ICA1-213ENST00000455539 N4BP2Q86UW6 1770 aaPredicted RBP16.42■□□□□ 0.22
ICA1-213ENST00000455539 MKRN4PQ13434 485 aaPredicted RBP16.42■□□□□ 0.22
ICA1-213ENST00000455539 ZCRB1Q8TBF4 217 aaKnown RBP16.42■□□□□ 0.22
ICA1-213ENST00000455539 ARHGAP27Q6ZUM4 889 aa16.41■□□□□ 0.22
ICA1-213ENST00000455539 AK7Q96M32 723 aa16.41■□□□□ 0.22
ICA1-213ENST00000455539 KDM2BQ8NHM5 1336 aa16.41■□□□□ 0.22
ICA1-213ENST00000455539 SMC1BQ8NDV3 1235 aa16.4■□□□□ 0.22
ICA1-213ENST00000455539 TGFB2P61812 414 aa16.4■□□□□ 0.22
ICA1-213ENST00000455539 BCS1LQ9Y276 419 aa16.4■□□□□ 0.22
ICA1-213ENST00000455539 KCPQ6ZWJ8 1503 aa16.4■□□□□ 0.22
ICA1-213ENST00000455539 IP6K1Q92551 441 aa16.39■□□□□ 0.21
ICA1-213ENST00000455539 PALLDQ8WX93 1383 aa16.39■□□□□ 0.21
ICA1-213ENST00000455539 ARFGEF1Q9Y6D6 1849 aa16.39■□□□□ 0.21
ICA1-213ENST00000455539 C9orf131Q5VYM1 1079 aa16.38■□□□□ 0.21
ICA1-213ENST00000455539 BRCA1P38398 1863 aaKnown RBP16.38■□□□□ 0.21
ICA1-213ENST00000455539 AMIGO3Q86WK7 504 aa16.38■□□□□ 0.21
ICA1-213ENST00000455539 MEGF6O75095 1541 aa16.38■□□□□ 0.21
ICA1-213ENST00000455539 RAB3GAP2Q9H2M9 1393 aa16.37■□□□□ 0.21
ICA1-213ENST00000455539 SSFA2P28290 1259 aa16.37■□□□□ 0.21
ICA1-213ENST00000455539 NME9Q86XW9 330 aa16.37■□□□□ 0.21
ICA1-213ENST00000455539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.37■□□□□ 0.21
ICA1-213ENST00000455539 PHF14O94880 888 aa16.37■□□□□ 0.21
ICA1-213ENST00000455539 RRAGCQ9HB90 399 aa16.37■□□□□ 0.21
ICA1-213ENST00000455539 RGPD2P0DJD1 1756 aa16.36■□□□□ 0.21
ICA1-213ENST00000455539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.36■□□□□ 0.21
ICA1-213ENST00000455539 LTV1Q96GA3 475 aaPredicted RBP16.35■□□□□ 0.21
ICA1-213ENST00000455539 SMARCC1Q92922 1105 aaPredicted RBP16.35■□□□□ 0.21
ICA1-213ENST00000455539 SBNO2Q9Y2G9 1366 aa16.34■□□□□ 0.21
ICA1-213ENST00000455539 FCHSD2O94868 740 aa16.34■□□□□ 0.21
ICA1-213ENST00000455539 A0A0G2JLW4 131 aa16.33■□□□□ 0.21
ICA1-213ENST00000455539 SMIM5Q71RC9 77 aa16.33■□□□□ 0.21
ICA1-213ENST00000455539 CGNL1Q0VF96 1302 aa16.33■□□□□ 0.2
ICA1-213ENST00000455539 ITGB4P16144 1822 aa16.32■□□□□ 0.2
ICA1-213ENST00000455539 MMP10P09238 476 aa16.32■□□□□ 0.2
ICA1-213ENST00000455539 MAP2P11137 1827 aaKnown RBP16.32■□□□□ 0.2
ICA1-213ENST00000455539 CD163L1Q9NR16 1453 aa16.32■□□□□ 0.2
ICA1-213ENST00000455539 DPEP1P16444 411 aa16.31■□□□□ 0.2
ICA1-213ENST00000455539 GOLGB1Q14789 3259 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms