RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 NCBP3Q53F19 620 aaKnown RBP21.91■■□□□ 1.1
CCDC90B-202ENST00000455220 BARGINQ6ZT62 677 aa21.91■■□□□ 1.1
CCDC90B-202ENST00000455220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.91■■□□□ 1.1
CCDC90B-202ENST00000455220 GLI3P10071 1580 aa21.91■■□□□ 1.1
CCDC90B-202ENST00000455220 TMPOP42166 694 aaKnown RBP21.91■■□□□ 1.1
CCDC90B-202ENST00000455220 NFE2L2Q16236 605 aa21.91■■□□□ 1.1
CCDC90B-202ENST00000455220 MTHFSDQ2M296 383 aaKnown RBP21.91■■□□□ 1.1
CCDC90B-202ENST00000455220 AMOTQ4VCS5 1084 aa21.91■■□□□ 1.1
CCDC90B-202ENST00000455220 CCDC9Q9Y3X0 531 aaKnown RBP21.91■■□□□ 1.1
CCDC90B-202ENST00000455220 HNRNPUQ00839 825 aaKnown RBP eCLIP21.9■■□□□ 1.1
CCDC90B-202ENST00000455220 PLEKHO1Q53GL0 409 aaPredicted RBP21.9■■□□□ 1.1
CCDC90B-202ENST00000455220 ZNF772Q68DY9 489 aaPredicted RBP21.9■■□□□ 1.1
CCDC90B-202ENST00000455220 NGEFQ8N5V2 710 aa21.9■■□□□ 1.1
CCDC90B-202ENST00000455220 GAS2L2Q8NHY3 880 aa21.9■■□□□ 1.1
CCDC90B-202ENST00000455220 CDCA7Q9BWT1 371 aaPredicted RBP21.9■■□□□ 1.1
CCDC90B-202ENST00000455220 GJD4Q96KN9 370 aaPredicted RBP21.89■■□□□ 1.09
CCDC90B-202ENST00000455220 DLG5Q8TDM6 1919 aa21.88■■□□□ 1.09
CCDC90B-202ENST00000455220 QTRT2Q9H974 415 aaKnown RBP21.87■■□□□ 1.09
CCDC90B-202ENST00000455220 SHANK3Q9BYB0 1731 aa21.87■■□□□ 1.09
CCDC90B-202ENST00000455220 PHF23Q9BUL5 403 aaPredicted RBP21.87■■□□□ 1.09
CCDC90B-202ENST00000455220 RRP7AQ9Y3A4 280 aaKnown RBP21.87■■□□□ 1.09
CCDC90B-202ENST00000455220 CCDC27Q2M243 656 aa21.86■■□□□ 1.09
CCDC90B-202ENST00000455220 YTHDC1Q96MU7 727 aaKnown RBP21.86■■□□□ 1.09
CCDC90B-202ENST00000455220 SPG7Q9UQ90 795 aa21.86■■□□□ 1.09
CCDC90B-202ENST00000455220 THSD7AQ9UPZ6 1657 aa21.86■■□□□ 1.09
CCDC90B-202ENST00000455220 SENP3-EIF4A1A0A087X0R7 540 aa21.85■■□□□ 1.09
CCDC90B-202ENST00000455220 RIPK4P57078 832 aa21.85■■□□□ 1.09
CCDC90B-202ENST00000455220 TNS2Q63HR2 1409 aa21.85■■□□□ 1.09
CCDC90B-202ENST00000455220 LRRC37A3O60309 1634 aa21.84■■□□□ 1.09
CCDC90B-202ENST00000455220 ZBED9Q6R2W3 1325 aa21.84■■□□□ 1.09
CCDC90B-202ENST00000455220 ZCRB1Q8TBF4 217 aaKnown RBP21.84■■□□□ 1.09
CCDC90B-202ENST00000455220 NEUROD2Q15784 382 aa21.83■■□□□ 1.09
CCDC90B-202ENST00000455220 FAM98CQ17RN3 349 aaKnown RBP21.83■■□□□ 1.09
CCDC90B-202ENST00000455220 ZNF530Q6P9A1 599 aaPredicted RBP21.83■■□□□ 1.09
CCDC90B-202ENST00000455220 TRIM35Q9UPQ4 493 aa21.83■■□□□ 1.09
CCDC90B-202ENST00000455220 ZNF521Q96K83 1311 aa21.83■■□□□ 1.08
CCDC90B-202ENST00000455220 ONECUT3O60422 494 aaPredicted RBP21.82■■□□□ 1.08
CCDC90B-202ENST00000455220 AKAP4Q5JQC9 854 aa21.82■■□□□ 1.08
CCDC90B-202ENST00000455220 RGS17Q9UGC6 210 aaPredicted RBP21.82■■□□□ 1.08
CCDC90B-202ENST00000455220 MAP3K5Q99683 1374 aa21.82■■□□□ 1.08
CCDC90B-202ENST00000455220 PCDH11XQ9BZA7 1347 aa21.82■■□□□ 1.08
CCDC90B-202ENST00000455220 PCDH11YQ9BZA8 1340 aa21.82■■□□□ 1.08
CCDC90B-202ENST00000455220 CYP27B1O15528 508 aa21.81■■□□□ 1.08
CCDC90B-202ENST00000455220 HTATSF1O43719 755 aaKnown RBP21.81■■□□□ 1.08
CCDC90B-202ENST00000455220 LMOD3Q0VAK6 560 aa21.81■■□□□ 1.08
CCDC90B-202ENST00000455220 SALL2Q9Y467 1007 aaPredicted RBP21.81■■□□□ 1.08
CCDC90B-202ENST00000455220 ADAMTS7Q9UKP4 1686 aa21.8■■□□□ 1.08
CCDC90B-202ENST00000455220 GNAT3A8MTJ3 354 aa21.8■■□□□ 1.08
CCDC90B-202ENST00000455220 PHKG2P15735 406 aa21.8■■□□□ 1.08
CCDC90B-202ENST00000455220 WWC1Q8IX03 1113 aa21.8■■□□□ 1.08
CCDC90B-202ENST00000455220 EXOC5O00471 708 aa21.79■■□□□ 1.08
CCDC90B-202ENST00000455220 C1orf141Q5JVX7 400 aa21.79■■□□□ 1.08
CCDC90B-202ENST00000455220 IFNL2Q8IZJ0 200 aa21.79■■□□□ 1.08
CCDC90B-202ENST00000455220 RBM6P78332 1123 aaKnown RBP21.78■■□□□ 1.08
CCDC90B-202ENST00000455220 DDB1Q16531 1140 aa21.78■■□□□ 1.08
CCDC90B-202ENST00000455220 VIRMAQ69YN4 1812 aaKnown RBP21.76■■□□□ 1.07
CCDC90B-202ENST00000455220 CEMIPQ8WUJ3 1361 aa21.76■■□□□ 1.07
CCDC90B-202ENST00000455220 NKX1-1Q15270 411 aaPredicted RBP21.76■■□□□ 1.07
CCDC90B-202ENST00000455220 RTF1Q92541 710 aaKnown RBP21.76■■□□□ 1.07
CCDC90B-202ENST00000455220 HSP90AB1P08238 724 aaKnown RBP21.75■■□□□ 1.07
CCDC90B-202ENST00000455220 SCN11AQ9UI33 1791 aa21.75■■□□□ 1.07
CCDC90B-202ENST00000455220 KDM6AO15550 1401 aaPredicted RBP21.74■■□□□ 1.07
CCDC90B-202ENST00000455220 WDR63Q8IWG1 891 aa21.74■■□□□ 1.07
CCDC90B-202ENST00000455220 IL17REQ8NFR9 667 aa21.74■■□□□ 1.07
CCDC90B-202ENST00000455220 DDX54Q8TDD1 881 aaKnown RBP21.74■■□□□ 1.07
CCDC90B-202ENST00000455220 DCTN1Q14203 1278 aa21.74■■□□□ 1.07
CCDC90B-202ENST00000455220 POTEAQ6S8J7 498 aa21.74■■□□□ 1.07
CCDC90B-202ENST00000455220 MCM10Q7L590 875 aa21.74■■□□□ 1.07
CCDC90B-202ENST00000455220 MPRIPQ6WCQ1 1025 aa21.73■■□□□ 1.07
CCDC90B-202ENST00000455220 SEPT12Q8IYM1 358 aa21.73■■□□□ 1.07
CCDC90B-202ENST00000455220 DCAF5Q96JK2 942 aa21.73■■□□□ 1.07
CCDC90B-202ENST00000455220 RNMTO43148 476 aaKnown RBP21.72■■□□□ 1.07
CCDC90B-202ENST00000455220 RXRBP28702 533 aa21.72■■□□□ 1.07
CCDC90B-202ENST00000455220 THUMPD2Q9BTF0 503 aaKnown RBP21.72■■□□□ 1.07
CCDC90B-202ENST00000455220 IL16Q14005 1332 aa21.72■■□□□ 1.07
CCDC90B-202ENST00000455220 A0A0G2JS52 829 aa21.71■■□□□ 1.07
CCDC90B-202ENST00000455220 MYT1Q01538 1121 aa21.71■■□□□ 1.07
CCDC90B-202ENST00000455220 MARCH10Q8NA82 808 aaPredicted RBP21.71■■□□□ 1.07
CCDC90B-202ENST00000455220 LGR6Q9HBX8 967 aa21.71■■□□□ 1.07
CCDC90B-202ENST00000455220 MRC1P22897 1456 aa21.71■■□□□ 1.07
CCDC90B-202ENST00000455220 CALD1Q05682 793 aaKnown RBP21.7■■□□□ 1.06
CCDC90B-202ENST00000455220 PDE3BQ13370 1112 aa21.7■■□□□ 1.06
CCDC90B-202ENST00000455220 TOGARAM1Q9Y4F4 1720 aa21.7■■□□□ 1.06
CCDC90B-202ENST00000455220 GOLGA2Q08379 1002 aa21.7■■□□□ 1.06
CCDC90B-202ENST00000455220 SIPA1L3O60292 1781 aaPredicted RBP21.68■■□□□ 1.06
CCDC90B-202ENST00000455220 BRWD3Q6RI45 1802 aa21.68■■□□□ 1.06
CCDC90B-202ENST00000455220 BCL9O00512 1426 aa21.67■■□□□ 1.06
CCDC90B-202ENST00000455220 RGS12O14924 1447 aa21.67■■□□□ 1.06
CCDC90B-202ENST00000455220 SPINK5Q9NQ38 1064 aaPredicted RBP21.67■■□□□ 1.06
CCDC90B-202ENST00000455220 ZNF853P0CG23 659 aa21.66■■□□□ 1.06
CCDC90B-202ENST00000455220 IFT57Q9NWB7 429 aa21.66■■□□□ 1.06
CCDC90B-202ENST00000455220 ERVV-2B6SEH9 535 aa21.65■■□□□ 1.06
CCDC90B-202ENST00000455220 E9PSI1 815 aa21.65■■□□□ 1.06
CCDC90B-202ENST00000455220 SLFN5Q08AF3 891 aa21.65■■□□□ 1.06
CCDC90B-202ENST00000455220 CDCA7LQ96GN5 454 aa21.65■■□□□ 1.06
CCDC90B-202ENST00000455220 TRMT2AQ8IZ69 625 aaKnown RBP21.65■■□□□ 1.06
CCDC90B-202ENST00000455220 CFAP44Q96MT7 982 aa21.65■■□□□ 1.06
CCDC90B-202ENST00000455220 SLC52A2Q9HAB3 445 aa21.65■■□□□ 1.06
CCDC90B-202ENST00000455220 DOT1LQ8TEK3 1739 aa21.64■■□□□ 1.06
CCDC90B-202ENST00000455220 GNAI1P63096 354 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms