RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 PDE3BQ13370 1112 aa25.91■■□□□ 1.74
NCL-205ENST00000453992 EXOC5O00471 708 aa25.9■■□□□ 1.74
NCL-205ENST00000453992 NUDCQ9Y266 331 aa25.89■■□□□ 1.74
NCL-205ENST00000453992 SULT6B1Q6IMI4 303 aa25.87■■□□□ 1.73
NCL-205ENST00000453992 BCL9O00512 1426 aa25.86■■□□□ 1.73
NCL-205ENST00000453992 U2SURPO15042 1029 aaKnown RBP25.85■■□□□ 1.73
NCL-205ENST00000453992 AEBP1Q8IUX7 1158 aa25.85■■□□□ 1.73
NCL-205ENST00000453992 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.85■■□□□ 1.733e-16■■■■□ 19.9
NCL-205ENST00000453992 FAM182BQ5T319 152 aa25.84■■□□□ 1.73
NCL-205ENST00000453992 ZCRB1Q8TBF4 217 aaKnown RBP25.84■■□□□ 1.73
NCL-205ENST00000453992 SBF2Q86WG5 1849 aa25.84■■□□□ 1.73
NCL-205ENST00000453992 PCDH11XQ9BZA7 1347 aa25.83■■□□□ 1.73
NCL-205ENST00000453992 PCDH11YQ9BZA8 1340 aa25.83■■□□□ 1.73
NCL-205ENST00000453992 MARCH10Q8NA82 808 aaPredicted RBP25.82■■□□□ 1.72
NCL-205ENST00000453992 FAM196AQ6ZSG2 479 aa25.81■■□□□ 1.72
NCL-205ENST00000453992 SPG7Q9UQ90 795 aa25.81■■□□□ 1.72
NCL-205ENST00000453992 HMOX1P09601 288 aa25.8■■□□□ 1.72
NCL-205ENST00000453992 U2AF1L5P0DN76 240 aaPredicted RBP25.79■■□□□ 1.72
NCL-205ENST00000453992 U2AF1Q01081 240 aaKnown RBP eCLIP25.79■■□□□ 1.729e-16■□□□□ 10.6
NCL-205ENST00000453992 AMOTQ4VCS5 1084 aa25.79■■□□□ 1.72
NCL-205ENST00000453992 PLEKHO1Q53GL0 409 aaPredicted RBP25.77■■□□□ 1.72
NCL-205ENST00000453992 NHSQ6T4R5 1651 aa25.77■■□□□ 1.72
NCL-205ENST00000453992 FCHSD2O94868 740 aa25.76■■□□□ 1.71
NCL-205ENST00000453992 DDX54Q8TDD1 881 aaKnown RBP25.76■■□□□ 1.71
NCL-205ENST00000453992 RSPH6AQ9H0K4 717 aa25.76■■□□□ 1.71
NCL-205ENST00000453992 DOT1LQ8TEK3 1739 aa25.76■■□□□ 1.71
NCL-205ENST00000453992 TNS1Q9HBL0 1735 aaKnown RBP25.76■■□□□ 1.71
NCL-205ENST00000453992 CCDC125Q86Z20 511 aa25.75■■□□□ 1.71
NCL-205ENST00000453992 CYP27B1O15528 508 aa25.73■■□□□ 1.71
NCL-205ENST00000453992 KAT6BQ8WYB5 2073 aa25.72■■□□□ 1.71
NCL-205ENST00000453992 TOGARAM1Q9Y4F4 1720 aa25.71■■□□□ 1.71
NCL-205ENST00000453992 PRKAR2BP31323 418 aa25.71■■□□□ 1.71
NCL-205ENST00000453992 DIEXFQ68CQ4 756 aaKnown RBP25.71■■□□□ 1.71
NCL-205ENST00000453992 IFNL2Q8IZJ0 200 aa25.71■■□□□ 1.71
NCL-205ENST00000453992 VIRMAQ69YN4 1812 aaKnown RBP25.7■■□□□ 1.71
NCL-205ENST00000453992 PHKG2P15735 406 aa25.7■■□□□ 1.7
NCL-205ENST00000453992 WDR43Q15061 677 aaKnown RBP eCLIP25.7■■□□□ 1.72e-6■■□□□ 12.4
NCL-205ENST00000453992 DEFB132Q7Z7B7 95 aa25.7■■□□□ 1.7
NCL-205ENST00000453992 PNNQ9H307 717 aaKnown RBP25.7■■□□□ 1.7
NCL-205ENST00000453992 NKX1-1Q15270 411 aaPredicted RBP25.69■■□□□ 1.7
NCL-205ENST00000453992 ZNF530Q6P9A1 599 aaPredicted RBP25.69■■□□□ 1.7
NCL-205ENST00000453992 ITGB4P16144 1822 aa25.68■■□□□ 1.7
NCL-205ENST00000453992 SCN11AQ9UI33 1791 aa25.68■■□□□ 1.7
NCL-205ENST00000453992 HSP90AB1P08238 724 aaKnown RBP25.67■■□□□ 1.7
NCL-205ENST00000453992 C1orf141Q5JVX7 400 aa25.67■■□□□ 1.7
NCL-205ENST00000453992 GAS2L2Q8NHY3 880 aa25.67■■□□□ 1.7
NCL-205ENST00000453992 ADAMTS7Q9UKP4 1686 aa25.67■■□□□ 1.7
NCL-205ENST00000453992 RGPD3A6NKT7 1758 aaPredicted RBP25.67■■□□□ 1.7
NCL-205ENST00000453992 RGPD4Q7Z3J3 1758 aa25.67■■□□□ 1.7
NCL-205ENST00000453992 BTAF1O14981 1849 aa25.66■■□□□ 1.7
NCL-205ENST00000453992 MRS2Q9HD23 443 aa25.66■■□□□ 1.7
NCL-205ENST00000453992 TRIM37O94972 964 aa25.65■■□□□ 1.7
NCL-205ENST00000453992 NEFMP07197 916 aa25.65■■□□□ 1.7
NCL-205ENST00000453992 MTHFSDQ2M296 383 aaKnown RBP25.65■■□□□ 1.7
NCL-205ENST00000453992 CCDC184Q52MB2 194 aa25.65■■□□□ 1.7
NCL-205ENST00000453992 AKAP4Q5JQC9 854 aa25.65■■□□□ 1.7
NCL-205ENST00000453992 PLEKHF1Q96S99 279 aa25.64■■□□□ 1.7
NCL-205ENST00000453992 BCL11BQ9C0K0 894 aaPredicted RBP25.64■■□□□ 1.7
NCL-205ENST00000453992 SF3B2Q13435 895 aaKnown RBP25.63■■□□□ 1.69
NCL-205ENST00000453992 DCAF5Q96JK2 942 aa25.63■■□□□ 1.69
NCL-205ENST00000453992 PHACTR3Q96KR7 559 aa25.63■■□□□ 1.69
NCL-205ENST00000453992 DLG5Q8TDM6 1919 aa25.63■■□□□ 1.69
NCL-205ENST00000453992 KDM6AO15550 1401 aaPredicted RBP25.63■■□□□ 1.69
NCL-205ENST00000453992 MAPK8IP3Q9UPT6 1336 aa25.62■■□□□ 1.69
NCL-205ENST00000453992 MAP3K5Q99683 1374 aa25.61■■□□□ 1.69
NCL-205ENST00000453992 ACSBG1Q96GR2 724 aa25.61■■□□□ 1.69
NCL-205ENST00000453992 PNISRQ8TF01 805 aaKnown RBP25.6■■□□□ 1.69
NCL-205ENST00000453992 ADAMTS8Q9UP79 889 aa25.6■■□□□ 1.69
NCL-205ENST00000453992 MRC1P22897 1456 aa25.59■■□□□ 1.69
NCL-205ENST00000453992 CCER2I3L3R5 266 aa25.58■■□□□ 1.69
NCL-205ENST00000453992 KCNQ2O43526 872 aa25.58■■□□□ 1.69
NCL-205ENST00000453992 ERVV-2B6SEH9 535 aa25.57■■□□□ 1.68
NCL-205ENST00000453992 PRIM1P49642 420 aaKnown RBP25.57■■□□□ 1.68
NCL-205ENST00000453992 EN1Q05925 392 aaPredicted RBP25.57■■□□□ 1.68
NCL-205ENST00000453992 GNAT3A8MTJ3 354 aa25.56■■□□□ 1.68
NCL-205ENST00000453992 BAG6P46379 1132 aa25.56■■□□□ 1.68
NCL-205ENST00000453992 RUNDC1Q96C34 613 aa25.56■■□□□ 1.68
NCL-205ENST00000453992 MPRIPQ6WCQ1 1025 aa25.55■■□□□ 1.68
NCL-205ENST00000453992 PTF1AQ7RTS3 328 aa25.55■■□□□ 1.68
NCL-205ENST00000453992 SYTL4Q96C24 671 aaPredicted RBP25.55■■□□□ 1.68
NCL-205ENST00000453992 SIPA1L3O60292 1781 aaPredicted RBP25.54■■□□□ 1.68
NCL-205ENST00000453992 APBA3O96018 575 aa25.54■■□□□ 1.68
NCL-205ENST00000453992 NFE2L2Q16236 605 aa25.54■■□□□ 1.68
NCL-205ENST00000453992 RREB1Q92766 1687 aa25.54■■□□□ 1.68
NCL-205ENST00000453992 LY75O60449 1722 aa25.53■■□□□ 1.68
NCL-205ENST00000453992 PLSCR1O15162 318 aa25.52■■□□□ 1.68
NCL-205ENST00000453992 HTATSF1O43719 755 aaKnown RBP25.52■■□□□ 1.68
NCL-205ENST00000453992 TMOD3Q9NYL9 352 aa25.52■■□□□ 1.68
NCL-205ENST00000453992 RNMTO43148 476 aaKnown RBP25.51■■□□□ 1.67
NCL-205ENST00000453992 CCDC146Q8IYE0 955 aa25.51■■□□□ 1.67
NCL-205ENST00000453992 CEMIPQ8WUJ3 1361 aa25.51■■□□□ 1.67
NCL-205ENST00000453992 PAPPAQ13219 1627 aa25.5■■□□□ 1.67
NCL-205ENST00000453992 EZH2Q15910 746 aaKnown RBP25.5■■□□□ 1.67
NCL-205ENST00000453992 RTF1Q92541 710 aaKnown RBP25.5■■□□□ 1.67
NCL-205ENST00000453992 CABP4P57796 275 aa25.49■■□□□ 1.67
NCL-205ENST00000453992 PIGBQ92521 554 aa25.49■■□□□ 1.67
NCL-205ENST00000453992 CAMKK2Q96RR4 588 aa25.49■■□□□ 1.67
NCL-205ENST00000453992 MIER1Q8N108 512 aa25.48■■□□□ 1.67
NCL-205ENST00000453992 LGR6Q9HBX8 967 aa25.48■■□□□ 1.67
NCL-205ENST00000453992 NUP188Q5SRE5 1749 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms