RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 PLPPR3Q6T4P5 718 aa22.95■■□□□ 1.26
MECP2-205ENST00000453960 GCC1Q96CN9 775 aa22.95■■□□□ 1.26
MECP2-205ENST00000453960 TBC1D32Q96NH3 1257 aa22.95■■□□□ 1.26
MECP2-205ENST00000453960 ELL2O00472 640 aaPredicted RBP22.94■■□□□ 1.26
MECP2-205ENST00000453960 NLRP6P59044 892 aa22.94■■□□□ 1.26
MECP2-205ENST00000453960 MTHFSDQ2M296 383 aaKnown RBP22.94■■□□□ 1.26
MECP2-205ENST00000453960 HOXC9P31274 260 aa22.94■■□□□ 1.26
MECP2-205ENST00000453960 NBR1Q14596 966 aa22.94■■□□□ 1.26
MECP2-205ENST00000453960 MCM10Q7L590 875 aa22.94■■□□□ 1.26
MECP2-205ENST00000453960 GAS2L2Q8NHY3 880 aa22.94■■□□□ 1.26
MECP2-205ENST00000453960 AMPHP49418 695 aa22.93■■□□□ 1.26
MECP2-205ENST00000453960 LMTK3Q96Q04 1460 aa22.92■■□□□ 1.26
MECP2-205ENST00000453960 PTPRCP08575 1304 aa22.92■■□□□ 1.26
MECP2-205ENST00000453960 SIRT2Q8IXJ6 389 aa22.91■■□□□ 1.26
MECP2-205ENST00000453960 PHF8Q9UPP1 1060 aa22.91■■□□□ 1.26
MECP2-205ENST00000453960 CHD1LQ86WJ1 897 aa22.91■■□□□ 1.26
MECP2-205ENST00000453960 N4BP2Q86UW6 1770 aaPredicted RBP22.9■■□□□ 1.26
MECP2-205ENST00000453960 NPHP4O75161 1426 aaPredicted RBP22.89■■□□□ 1.25
MECP2-205ENST00000453960 FAM208AQ9UK61 1670 aaKnown RBP22.89■■□□□ 1.25
MECP2-205ENST00000453960 UPF2Q9HAU5 1272 aaKnown RBP22.88■■□□□ 1.25
MECP2-205ENST00000453960 BABAM1Q9NWV8 329 aa22.88■■□□□ 1.25
MECP2-205ENST00000453960 ATP10DQ9P241 1426 aa22.88■■□□□ 1.25
MECP2-205ENST00000453960 SOS1Q07889 1333 aaPredicted RBP22.87■■□□□ 1.25
MECP2-205ENST00000453960 SOX12O15370 315 aa22.87■■□□□ 1.25
MECP2-205ENST00000453960 FOXO3O43524 673 aa22.87■■□□□ 1.25
MECP2-205ENST00000453960 KRT24Q2M2I5 525 aa22.87■■□□□ 1.25
MECP2-205ENST00000453960 DAXXQ9UER7 740 aaPredicted RBP22.87■■□□□ 1.25
MECP2-205ENST00000453960 SLC4A3P48751 1232 aa22.86■■□□□ 1.25
MECP2-205ENST00000453960 RTL5Q5HYW3 569 aaPredicted RBP22.86■■□□□ 1.25
MECP2-205ENST00000453960 ABTB2Q8N961 1025 aa22.86■■□□□ 1.25
MECP2-205ENST00000453960 MED1Q15648 1581 aaPredicted RBP22.86■■□□□ 1.25
MECP2-205ENST00000453960 SLIT3O75094 1523 aa22.85■■□□□ 1.25
MECP2-205ENST00000453960 BMP2KLQ5H9B9 411 aa22.85■■□□□ 1.25
MECP2-205ENST00000453960 RTF1Q92541 710 aaKnown RBP22.85■■□□□ 1.25
MECP2-205ENST00000453960 MSH6P52701 1360 aa22.84■■□□□ 1.25
MECP2-205ENST00000453960 TRPM3Q9HCF6 1732 aaPredicted RBP22.84■■□□□ 1.25
MECP2-205ENST00000453960 NCAPD2Q15021 1401 aa22.84■■□□□ 1.25
MECP2-205ENST00000453960 IP6K1Q92551 441 aa22.83■■□□□ 1.25
MECP2-205ENST00000453960 BECN1Q14457 450 aa22.82■■□□□ 1.24
MECP2-205ENST00000453960 LNPKQ9C0E8 428 aa22.82■■□□□ 1.24
MECP2-205ENST00000453960 MAP3K5Q99683 1374 aa22.82■■□□□ 1.24
MECP2-205ENST00000453960 MST1RQ04912 1400 aa22.82■■□□□ 1.24
MECP2-205ENST00000453960 DCTPP1Q9H773 170 aa22.82■■□□□ 1.24
MECP2-205ENST00000453960 CAMTA1Q9Y6Y1 1673 aa22.81■■□□□ 1.24
MECP2-205ENST00000453960 GNAT3A8MTJ3 354 aa22.81■■□□□ 1.24
MECP2-205ENST00000453960 ANKRD44Q8N8A2 993 aa22.81■■□□□ 1.24
MECP2-205ENST00000453960 C1orf115Q9H7X2 142 aa22.81■■□□□ 1.24
MECP2-205ENST00000453960 TSPYL4Q9UJ04 414 aa22.81■■□□□ 1.24
MECP2-205ENST00000453960 LMO7Q8WWI1 1683 aa22.81■■□□□ 1.24
MECP2-205ENST00000453960 KIF1AQ12756 1690 aa22.8■■□□□ 1.24
MECP2-205ENST00000453960 DEKP35659 375 aaKnown RBP22.8■■□□□ 1.24
MECP2-205ENST00000453960 RPAP2Q8IXW5 612 aaPredicted RBP22.8■■□□□ 1.24
MECP2-205ENST00000453960 HSPA2P54652 639 aa22.79■■□□□ 1.24
MECP2-205ENST00000453960 KDM3BQ7LBC6 1761 aa22.79■■□□□ 1.24
MECP2-205ENST00000453960 RGPD2P0DJD1 1756 aa22.78■■□□□ 1.24
MECP2-205ENST00000453960 CEMIPQ8WUJ3 1361 aa22.78■■□□□ 1.24
MECP2-205ENST00000453960 KCNH5Q8NCM2 988 aa22.78■■□□□ 1.24
MECP2-205ENST00000453960 NFKBIBQ15653 356 aa22.77■■□□□ 1.24
MECP2-205ENST00000453960 ANKRD45Q5TZF3 282 aa22.77■■□□□ 1.24
MECP2-205ENST00000453960 NUTM2GQ5VZR2 741 aa22.77■■□□□ 1.23
MECP2-205ENST00000453960 IL17REQ8NFR9 667 aa22.77■■□□□ 1.23
MECP2-205ENST00000453960 C22orf23Q9BZE7 217 aa22.77■■□□□ 1.23
MECP2-205ENST00000453960 SLC4A2P04920 1241 aa22.76■■□□□ 1.23
MECP2-205ENST00000453960 RBM25P49756 843 aaKnown RBP22.76■■□□□ 1.23
MECP2-205ENST00000453960 CEP85Q6P2H3 762 aa22.75■■□□□ 1.23
MECP2-205ENST00000453960 MIS18AQ9NYP9 233 aa22.75■■□□□ 1.23
MECP2-205ENST00000453960 PXDNLA1KZ92 1463 aa22.75■■□□□ 1.23
MECP2-205ENST00000453960 ANTXR1Q9H6X2 564 aa22.74■■□□□ 1.23
MECP2-205ENST00000453960 FBXO41Q8TF61 875 aa22.74■■□□□ 1.23
MECP2-205ENST00000453960 TBC1D2Q9BYX2 928 aa22.74■■□□□ 1.23
MECP2-205ENST00000453960 CCT4P50991 539 aaKnown RBP22.73■■□□□ 1.23
MECP2-205ENST00000453960 TAF7Q15545 349 aaPredicted RBP22.73■■□□□ 1.23
MECP2-205ENST00000453960 ALS2Q96Q42 1657 aa22.72■■□□□ 1.23
MECP2-205ENST00000453960 G2E3Q7L622 706 aa22.72■■□□□ 1.23
MECP2-205ENST00000453960 PSME1Q06323 249 aa22.71■■□□□ 1.23
MECP2-205ENST00000453960 ESCO1Q5FWF5 840 aa22.71■■□□□ 1.23
MECP2-205ENST00000453960 OVOS2A0A0G2JMS6 1433 aa22.71■■□□□ 1.23
MECP2-205ENST00000453960 ADAMTS7Q9UKP4 1686 aa22.71■■□□□ 1.23
MECP2-205ENST00000453960 CCDC30Q5VVM6 783 aa22.7■■□□□ 1.22
MECP2-205ENST00000453960 ARHGEF25Q86VW2 580 aa22.7■■□□□ 1.22
MECP2-205ENST00000453960 MEIS3Q99687 375 aa22.7■■□□□ 1.22
MECP2-205ENST00000453960 MFAP1P55081 439 aaKnown RBP22.69■■□□□ 1.22
MECP2-205ENST00000453960 NBPF6Q5VWK0 638 aa22.69■■□□□ 1.22
MECP2-205ENST00000453960 PLEKHM2Q8IWE5 1019 aa22.69■■□□□ 1.22
MECP2-205ENST00000453960 NBPF4Q96M43 638 aa22.69■■□□□ 1.22
MECP2-205ENST00000453960 STK31Q9BXU1 1019 aa22.68■■□□□ 1.22
MECP2-205ENST00000453960 C1orf167Q5SNV9 1468 aa22.67■■□□□ 1.22
MECP2-205ENST00000453960 SIPA1L3O60292 1781 aaPredicted RBP22.67■■□□□ 1.22
MECP2-205ENST00000453960 RBM33Q96EV2 1170 aaKnown RBP22.67■■□□□ 1.22
MECP2-205ENST00000453960 TUBGCP6Q96RT7 1819 aa22.66■■□□□ 1.22
MECP2-205ENST00000453960 NCOA3Q9Y6Q9 1424 aa22.66■■□□□ 1.22
MECP2-205ENST00000453960 EIF5BO60841 1220 aaKnown RBP22.65■■□□□ 1.22
MECP2-205ENST00000453960 HOXB7P09629 217 aa22.65■■□□□ 1.22
MECP2-205ENST00000453960 FLIIQ13045 1269 aa22.65■■□□□ 1.22
MECP2-205ENST00000453960 SNX21Q969T3 373 aa22.65■■□□□ 1.22
MECP2-205ENST00000453960 LTV1Q96GA3 475 aaPredicted RBP22.65■■□□□ 1.22
MECP2-205ENST00000453960 ORAI2Q96SN7 254 aa22.65■■□□□ 1.22
MECP2-205ENST00000453960 GCP02774 474 aa22.64■■□□□ 1.21
MECP2-205ENST00000453960 GSPT1P15170 499 aaKnown RBP22.64■■□□□ 1.21
MECP2-205ENST00000453960 TBC1D9Q6ZT07 1266 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms