RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 EIF4A2Q14240 407 aaKnown RBP19.92■□□□□ 0.78
VPS16-205ENST00000453689 NUP188Q5SRE5 1749 aa19.92■□□□□ 0.78
VPS16-205ENST00000453689 CNGB1Q14028 1251 aaPredicted RBP19.91■□□□□ 0.78
VPS16-205ENST00000453689 DDX10Q13206 875 aaKnown RBP19.9■□□□□ 0.78
VPS16-205ENST00000453689 RAPGEF4Q8WZA2 1011 aa19.9■□□□□ 0.78
VPS16-205ENST00000453689 EYA1Q99502 592 aa19.9■□□□□ 0.78
VPS16-205ENST00000453689 APBA3O96018 575 aa19.89■□□□□ 0.77
VPS16-205ENST00000453689 ITGB4P16144 1822 aa19.89■□□□□ 0.77
VPS16-205ENST00000453689 TATP17735 454 aaPredicted RBP19.89■□□□□ 0.77
VPS16-205ENST00000453689 EN1Q05925 392 aaPredicted RBP19.89■□□□□ 0.77
VPS16-205ENST00000453689 ZCRB1Q8TBF4 217 aaKnown RBP19.88■□□□□ 0.77
VPS16-205ENST00000453689 DDX54Q8TDD1 881 aaKnown RBP19.88■□□□□ 0.77
VPS16-205ENST00000453689 MTHFSP49914 203 aa19.87■□□□□ 0.77
VPS16-205ENST00000453689 PTF1AQ7RTS3 328 aa19.87■□□□□ 0.77
VPS16-205ENST00000453689 VIRMAQ69YN4 1812 aaKnown RBP19.86■□□□□ 0.77
VPS16-205ENST00000453689 IGSF1Q8N6C5 1336 aa19.86■□□□□ 0.77
VPS16-205ENST00000453689 TOGARAM1Q9Y4F4 1720 aa19.86■□□□□ 0.77
VPS16-205ENST00000453689 BCL11BQ9C0K0 894 aaPredicted RBP19.86■□□□□ 0.77
VPS16-205ENST00000453689 EZH2Q15910 746 aaKnown RBP19.85■□□□□ 0.77
VPS16-205ENST00000453689 CAMKK2Q96RR4 588 aa19.85■□□□□ 0.77
VPS16-205ENST00000453689 ACSBG1Q96GR2 724 aa19.84■□□□□ 0.77
VPS16-205ENST00000453689 PARD3Q8TEW0 1356 aa19.83■□□□□ 0.77
VPS16-205ENST00000453689 KCNQ2O43526 872 aa19.83■□□□□ 0.77
VPS16-205ENST00000453689 PCDH11XQ9BZA7 1347 aa19.82■□□□□ 0.76
VPS16-205ENST00000453689 PCDH11YQ9BZA8 1340 aa19.82■□□□□ 0.76
VPS16-205ENST00000453689 COL3A1P02461 1466 aaPredicted RBP19.82■□□□□ 0.76
VPS16-205ENST00000453689 IL13P35225 146 aa19.82■□□□□ 0.76
VPS16-205ENST00000453689 LY75O60449 1722 aa19.81■□□□□ 0.76
VPS16-205ENST00000453689 PLSCR1O15162 318 aa19.8■□□□□ 0.76
VPS16-205ENST00000453689 PLEKHG2Q9H7P9 1386 aa19.79■□□□□ 0.76
VPS16-205ENST00000453689 CYP27B1O15528 508 aa19.78■□□□□ 0.76
VPS16-205ENST00000453689 SPG7Q9UQ90 795 aa19.78■□□□□ 0.76
VPS16-205ENST00000453689 AEBP1Q8IUX7 1158 aa19.77■□□□□ 0.76
VPS16-205ENST00000453689 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.77■□□□□ 0.76
VPS16-205ENST00000453689 KDRP35968 1356 aa19.77■□□□□ 0.76
VPS16-205ENST00000453689 DIAPH1O60610 1272 aaKnown RBP19.76■□□□□ 0.75
VPS16-205ENST00000453689 SULT6B1Q6IMI4 303 aa19.76■□□□□ 0.75
VPS16-205ENST00000453689 SCN11AQ9UI33 1791 aa19.75■□□□□ 0.75
VPS16-205ENST00000453689 PPP2R1AP30153 589 aa19.75■□□□□ 0.75
VPS16-205ENST00000453689 PRIM1P49642 420 aaKnown RBP19.75■□□□□ 0.75
VPS16-205ENST00000453689 SYTL4Q96C24 671 aaPredicted RBP19.74■□□□□ 0.75
VPS16-205ENST00000453689 TAF1LQ8IZX4 1826 aa19.73■□□□□ 0.75
VPS16-205ENST00000453689 PAPPAQ13219 1627 aa19.73■□□□□ 0.75
VPS16-205ENST00000453689 PHKG2P15735 406 aa19.72■□□□□ 0.75
VPS16-205ENST00000453689 PROM2Q8N271 834 aa19.72■□□□□ 0.75
VPS16-205ENST00000453689 NKX1-1Q15270 411 aaPredicted RBP19.71■□□□□ 0.75
VPS16-205ENST00000453689 IFNL2Q8IZJ0 200 aa19.71■□□□□ 0.75
VPS16-205ENST00000453689 TUBGCP6Q96RT7 1819 aa19.7■□□□□ 0.74
VPS16-205ENST00000453689 PSDA5PKW4 1024 aaPredicted RBP19.7■□□□□ 0.74
VPS16-205ENST00000453689 HMOX1P09601 288 aa19.7■□□□□ 0.74
VPS16-205ENST00000453689 TXNRD1Q16881 649 aa19.7■□□□□ 0.74
VPS16-205ENST00000453689 PLEKHO1Q53GL0 409 aaPredicted RBP19.7■□□□□ 0.74
VPS16-205ENST00000453689 CFAP53Q96M91 514 aa19.7■□□□□ 0.74
VPS16-205ENST00000453689 AMOTQ4VCS5 1084 aa19.69■□□□□ 0.74
VPS16-205ENST00000453689 R3HDM1Q15032 1099 aaKnown RBP19.68■□□□□ 0.74
VPS16-205ENST00000453689 ZNF530Q6P9A1 599 aaPredicted RBP19.68■□□□□ 0.74
VPS16-205ENST00000453689 C5P01031 1676 aa19.68■□□□□ 0.74
VPS16-205ENST00000453689 QSER1Q2KHR3 1735 aa19.68■□□□□ 0.74
VPS16-205ENST00000453689 U2SURPO15042 1029 aaKnown RBP19.67■□□□□ 0.74
VPS16-205ENST00000453689 NBPF14Q5TI25 921 aa19.67■□□□□ 0.74
VPS16-205ENST00000453689 CASZ1Q86V15 1759 aa19.67■□□□□ 0.74
VPS16-205ENST00000453689 RALBP1Q15311 655 aa19.66■□□□□ 0.74
VPS16-205ENST00000453689 KDM6AO15550 1401 aaPredicted RBP19.66■□□□□ 0.74
VPS16-205ENST00000453689 ADAMTS7Q9UKP4 1686 aa19.65■□□□□ 0.74
VPS16-205ENST00000453689 MPRIPQ6WCQ1 1025 aa19.65■□□□□ 0.74
VPS16-205ENST00000453689 ANO8Q9HCE9 1232 aaPredicted RBP19.65■□□□□ 0.74
VPS16-205ENST00000453689 LRP5O75197 1615 aa19.65■□□□□ 0.74
VPS16-205ENST00000453689 DLG5Q8TDM6 1919 aa19.64■□□□□ 0.73
VPS16-205ENST00000453689 HSP90AB1P08238 724 aaKnown RBP19.63■□□□□ 0.73
VPS16-205ENST00000453689 C1orf141Q5JVX7 400 aa19.63■□□□□ 0.73
VPS16-205ENST00000453689 PIGBQ92521 554 aa19.63■□□□□ 0.73
VPS16-205ENST00000453689 PRKRIP1Q9H875 184 aaPredicted RBP19.63■□□□□ 0.73
VPS16-205ENST00000453689 LRRC4BQ9NT99 713 aa19.63■□□□□ 0.73
VPS16-205ENST00000453689 ANP32CO43423 234 aa19.62■□□□□ 0.73
VPS16-205ENST00000453689 SLC27A3Q5K4L6 730 aa19.62■□□□□ 0.73
VPS16-205ENST00000453689 DCAF5Q96JK2 942 aa19.62■□□□□ 0.73
VPS16-205ENST00000453689 NUDCQ9Y266 331 aa19.62■□□□□ 0.73
VPS16-205ENST00000453689 TMOD3Q9NYL9 352 aa19.61■□□□□ 0.73
VPS16-205ENST00000453689 SIPA1L3O60292 1781 aaPredicted RBP19.61■□□□□ 0.73
VPS16-205ENST00000453689 PALLDQ8WX93 1383 aa19.6■□□□□ 0.73
VPS16-205ENST00000453689 ZNF831Q5JPB2 1677 aa19.6■□□□□ 0.73
VPS16-205ENST00000453689 KCNQ4P56696 695 aa19.6■□□□□ 0.73
VPS16-205ENST00000453689 MTHFSDQ2M296 383 aaKnown RBP19.6■□□□□ 0.73
VPS16-205ENST00000453689 AKAP4Q5JQC9 854 aa19.6■□□□□ 0.73
VPS16-205ENST00000453689 DIEXFQ68CQ4 756 aaKnown RBP19.6■□□□□ 0.73
VPS16-205ENST00000453689 ERVV-2B6SEH9 535 aa19.59■□□□□ 0.73
VPS16-205ENST00000453689 RSPH6AQ9H0K4 717 aa19.59■□□□□ 0.73
VPS16-205ENST00000453689 MYBBP1AQ9BQG0 1328 aaKnown RBP19.58■□□□□ 0.73
VPS16-205ENST00000453689 U2AF1L5P0DN76 240 aaPredicted RBP19.58■□□□□ 0.72
VPS16-205ENST00000453689 U2AF1Q01081 240 aaKnown RBP eCLIP19.58■□□□□ 0.72
VPS16-205ENST00000453689 SLC15A2Q16348 729 aa19.58■□□□□ 0.72
VPS16-205ENST00000453689 SMARCC1Q92922 1105 aaPredicted RBP19.58■□□□□ 0.72
VPS16-205ENST00000453689 STK32BQ9NY57 414 aa19.58■□□□□ 0.72
VPS16-205ENST00000453689 CCNL1Q9UK58 526 aaPredicted RBP19.58■□□□□ 0.72
VPS16-205ENST00000453689 C4BP0C0L5 1744 aa19.58■□□□□ 0.72
VPS16-205ENST00000453689 COL5A3P25940 1745 aaPredicted RBP19.57■□□□□ 0.72
VPS16-205ENST00000453689 UBR3Q6ZT12 1888 aa19.57■□□□□ 0.72
VPS16-205ENST00000453689 MRC1P22897 1456 aa19.57■□□□□ 0.72
VPS16-205ENST00000453689 PRKAR2BP31323 418 aa19.57■□□□□ 0.72
VPS16-205ENST00000453689 ASAP1Q9ULH1 1129 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms