RNA–Protein interactions for RNA: ENST00000453141.5

HDLBP-226, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-226ENST00000453141 CCER2I3L3R5 266 aa10.43□□□□□ -0.74
HDLBP-226ENST00000453141 RRS1Q15050 365 aaKnown RBP10.43□□□□□ -0.74
HDLBP-226ENST00000453141 DDX54Q8TDD1 881 aaKnown RBP10.43□□□□□ -0.74
HDLBP-226ENST00000453141 PDGFDQ9GZP0 370 aaPredicted RBP10.43□□□□□ -0.74
HDLBP-226ENST00000453141 MEGF6O75095 1541 aa10.43□□□□□ -0.74
HDLBP-226ENST00000453141 KIF7Q2M1P5 1343 aa10.42□□□□□ -0.74
HDLBP-226ENST00000453141 NSD3Q9BZ95 1437 aa10.41□□□□□ -0.74
HDLBP-226ENST00000453141 ZBTB7AO95365 584 aa10.41□□□□□ -0.74
HDLBP-226ENST00000453141 RGPD2P0DJD1 1756 aa10.41□□□□□ -0.74
HDLBP-226ENST00000453141 DOT1LQ8TEK3 1739 aa10.41□□□□□ -0.74
HDLBP-226ENST00000453141 SHANK3Q9BYB0 1731 aa10.41□□□□□ -0.74
HDLBP-226ENST00000453141 INSRP06213 1382 aa10.4□□□□□ -0.74
HDLBP-226ENST00000453141 FLT4P35916 1363 aa10.4□□□□□ -0.74
HDLBP-226ENST00000453141 KIF24Q5T7B8 1368 aa10.4□□□□□ -0.74
HDLBP-226ENST00000453141 NBPF6Q5VWK0 638 aa10.4□□□□□ -0.74
HDLBP-226ENST00000453141 ZCRB1Q8TBF4 217 aaKnown RBP10.4□□□□□ -0.74
HDLBP-226ENST00000453141 SYTL4Q96C24 671 aaPredicted RBP10.4□□□□□ -0.74
HDLBP-226ENST00000453141 NBPF4Q96M43 638 aa10.4□□□□□ -0.74
HDLBP-226ENST00000453141 CARD14Q9BXL6 1004 aa10.4□□□□□ -0.74
HDLBP-226ENST00000453141 CGNL1Q0VF96 1302 aa10.39□□□□□ -0.75
HDLBP-226ENST00000453141 PTGER2P43116 358 aa10.39□□□□□ -0.75
HDLBP-226ENST00000453141 HSP90AB2PQ58FF8 381 aa10.39□□□□□ -0.75
HDLBP-226ENST00000453141 USHBP1Q8N6Y0 703 aa10.39□□□□□ -0.75
HDLBP-226ENST00000453141 RAPGEF4Q8WZA2 1011 aa10.39□□□□□ -0.75
HDLBP-226ENST00000453141 MTFR1LQ9H019 292 aa10.39□□□□□ -0.75
HDLBP-226ENST00000453141 LRRC4BQ9NT99 713 aa10.39□□□□□ -0.75
HDLBP-226ENST00000453141 NSD2O96028 1365 aa10.39□□□□□ -0.75
HDLBP-226ENST00000453141 PRIM1P49642 420 aaKnown RBP10.38□□□□□ -0.75
HDLBP-226ENST00000453141 SLC27A3Q5K4L6 730 aa10.38□□□□□ -0.75
HDLBP-226ENST00000453141 ATF5Q9Y2D1 282 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-226ENST00000453141 DCAF8L1A6NGE4 600 aa10.37□□□□□ -0.75
HDLBP-226ENST00000453141 TATP17735 454 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-226ENST00000453141 ZNF827Q17R98 1081 aa10.37□□□□□ -0.75
HDLBP-226ENST00000453141 ANKRD26Q9UPS8 1709 aa10.37□□□□□ -0.75
HDLBP-226ENST00000453141 EMILIN1Q9Y6C2 1016 aa10.37□□□□□ -0.75
HDLBP-226ENST00000453141 PCDH11XQ9BZA7 1347 aa10.36□□□□□ -0.75
HDLBP-226ENST00000453141 PCDH11YQ9BZA8 1340 aa10.36□□□□□ -0.75
HDLBP-226ENST00000453141 AKT1S1Q96B36 256 aa10.36□□□□□ -0.75
HDLBP-226ENST00000453141 SGIP1Q9BQI5 828 aa10.36□□□□□ -0.75
HDLBP-226ENST00000453141 LY75O60449 1722 aa10.36□□□□□ -0.75
HDLBP-226ENST00000453141 QSER1Q2KHR3 1735 aa10.36□□□□□ -0.75
HDLBP-226ENST00000453141 PPM1GO15355 546 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-226ENST00000453141 NCAPD2Q15021 1401 aa10.34□□□□□ -0.75
HDLBP-226ENST00000453141 PKD1L3Q7Z443 1732 aa10.34□□□□□ -0.75
HDLBP-226ENST00000453141 YY1P25490 414 aa10.34□□□□□ -0.75
HDLBP-226ENST00000453141 KCNQ4P56696 695 aa10.34□□□□□ -0.75
HDLBP-226ENST00000453141 PIAS4Q8N2W9 510 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-226ENST00000453141 POLR3GLQ9BT43 218 aa10.34□□□□□ -0.75
HDLBP-226ENST00000453141 FHDC1Q9C0D6 1143 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-226ENST00000453141 GTF3C3Q9Y5Q9 886 aa10.34□□□□□ -0.75
HDLBP-226ENST00000453141 PNPLA7Q6ZV29 1317 aa10.33□□□□□ -0.76
HDLBP-226ENST00000453141 SLC16A10Q8TF71 515 aa10.33□□□□□ -0.76
HDLBP-226ENST00000453141 ARXQ96QS3 562 aa10.33□□□□□ -0.76
HDLBP-226ENST00000453141 SYT17Q9BSW7 474 aa10.33□□□□□ -0.76
HDLBP-226ENST00000453141 TFCP2L1Q9NZI6 479 aa10.33□□□□□ -0.76
HDLBP-226ENST00000453141 CCNL1Q9UK58 526 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-226ENST00000453141 KAT6BQ8WYB5 2073 aa10.32□□□□□ -0.76
HDLBP-226ENST00000453141 UTRNP46939 3433 aa10.32□□□□□ -0.76
HDLBP-226ENST00000453141 MAP3K5Q99683 1374 aa10.32□□□□□ -0.76
HDLBP-226ENST00000453141 CYP27B1O15528 508 aa10.32□□□□□ -0.76
HDLBP-226ENST00000453141 TUBGCP6Q96RT7 1819 aa10.32□□□□□ -0.76
HDLBP-226ENST00000453141 TOGARAM1Q9Y4F4 1720 aa10.32□□□□□ -0.76
HDLBP-226ENST00000453141 POLKQ9UBT6 870 aa10.31□□□□□ -0.76
HDLBP-226ENST00000453141 SPG7Q9UQ90 795 aa10.31□□□□□ -0.76
HDLBP-226ENST00000453141 C5P01031 1676 aa10.31□□□□□ -0.76
HDLBP-226ENST00000453141 COL24A1Q17RW2 1714 aa10.3□□□□□ -0.76
HDLBP-226ENST00000453141 PALLDQ8WX93 1383 aa10.3□□□□□ -0.76
HDLBP-226ENST00000453141 POLD1P28340 1107 aa10.3□□□□□ -0.76
HDLBP-226ENST00000453141 TNNT2P45379 298 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-226ENST00000453141 MPRIPQ6WCQ1 1025 aa10.3□□□□□ -0.76
HDLBP-226ENST00000453141 EYA1Q99502 592 aa10.3□□□□□ -0.76
HDLBP-226ENST00000453141 PRKRIP1Q9H875 184 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-226ENST00000453141 MAP2P11137 1827 aaKnown RBP10.3□□□□□ -0.76
HDLBP-226ENST00000453141 PLEKHG2Q9H7P9 1386 aa10.29□□□□□ -0.76
HDLBP-226ENST00000453141 HMGB2P26583 209 aaKnown RBP10.29□□□□□ -0.76
HDLBP-226ENST00000453141 NKX1-1Q15270 411 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-226ENST00000453141 PANK3Q9H999 370 aa10.29□□□□□ -0.76
HDLBP-226ENST00000453141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.29□□□□□ -0.764e-20■■□□□ 13.8
HDLBP-226ENST00000453141 EIF4A2Q14240 407 aaKnown RBP10.28□□□□□ -0.76
HDLBP-226ENST00000453141 SMARCC1Q92922 1105 aaPredicted RBP10.28□□□□□ -0.76
HDLBP-226ENST00000453141 ITGB4P16144 1822 aa10.28□□□□□ -0.76
HDLBP-226ENST00000453141 COL23A1Q86Y22 540 aaPredicted RBP10.27□□□□□ -0.77
HDLBP-226ENST00000453141 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
HDLBP-226ENST00000453141 PIGBQ92521 554 aa10.27□□□□□ -0.77
HDLBP-226ENST00000453141 TAF1LQ8IZX4 1826 aa10.27□□□□□ -0.77
HDLBP-226ENST00000453141 IGSF1Q8N6C5 1336 aa10.27□□□□□ -0.77
HDLBP-226ENST00000453141 C4BP0C0L5 1744 aa10.27□□□□□ -0.77
HDLBP-226ENST00000453141 GOLGB1Q14789 3259 aaKnown RBP10.26□□□□□ -0.77
HDLBP-226ENST00000453141 PHKG2P15735 406 aa10.26□□□□□ -0.77
HDLBP-226ENST00000453141 IFNL2Q8IZJ0 200 aa10.26□□□□□ -0.77
HDLBP-226ENST00000453141 FLAD1Q8NFF5 587 aa10.26□□□□□ -0.77
HDLBP-226ENST00000453141 TMOD3Q9NYL9 352 aa10.26□□□□□ -0.77
HDLBP-226ENST00000453141 MORC1Q86VD1 984 aa10.25□□□□□ -0.77
HDLBP-226ENST00000453141 AK7Q96M32 723 aa10.25□□□□□ -0.77
HDLBP-226ENST00000453141 GPR162Q16538 588 aa10.24□□□□□ -0.77
HDLBP-226ENST00000453141 MSL1Q68DK7 614 aa10.24□□□□□ -0.77
HDLBP-226ENST00000453141 MRS2Q9HD23 443 aa10.24□□□□□ -0.77
HDLBP-226ENST00000453141 KNSTRNQ9Y448 316 aa10.24□□□□□ -0.77
HDLBP-226ENST00000453141 LOC102724428A0A0B4J2F2 783 aa10.23□□□□□ -0.77
HDLBP-226ENST00000453141 SIK1P57059 783 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms