RNA–Protein interactions for RNA: ENST00000451491.2

TSSC4-207, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-207ENST00000451491 TNS2Q63HR2 1409 aa26.9■■□□□ 1.9
TSSC4-207ENST00000451491 PKD1L3Q7Z443 1732 aa26.9■■□□□ 1.9
TSSC4-207ENST00000451491 U2AF1L5P0DN76 240 aaPredicted RBP26.9■■□□□ 1.9
TSSC4-207ENST00000451491 U2AF1Q01081 240 aaKnown RBP eCLIP26.9■■□□□ 1.9
TSSC4-207ENST00000451491 EXOC5O00471 708 aa26.89■■□□□ 1.89
TSSC4-207ENST00000451491 SHANK3Q9BYB0 1731 aa26.88■■□□□ 1.89
TSSC4-207ENST00000451491 MRS2Q9HD23 443 aa26.87■■□□□ 1.89
TSSC4-207ENST00000451491 RSPH6AQ9H0K4 717 aa26.86■■□□□ 1.89
TSSC4-207ENST00000451491 FCHSD2O94868 740 aa26.85■■□□□ 1.89
TSSC4-207ENST00000451491 KRT27Q7Z3Y8 459 aa26.85■■□□□ 1.89
TSSC4-207ENST00000451491 ZCRB1Q8TBF4 217 aaKnown RBP26.85■■□□□ 1.89
TSSC4-207ENST00000451491 PDE3BQ13370 1112 aa26.84■■□□□ 1.89
TSSC4-207ENST00000451491 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.84■■□□□ 1.89
TSSC4-207ENST00000451491 WDR43Q15061 677 aaKnown RBP eCLIP26.82■■□□□ 1.88
TSSC4-207ENST00000451491 MIER1Q8N108 512 aa26.82■■□□□ 1.88
TSSC4-207ENST00000451491 SPG7Q9UQ90 795 aa26.82■■□□□ 1.88
TSSC4-207ENST00000451491 PRKAR2BP31323 418 aa26.81■■□□□ 1.88
TSSC4-207ENST00000451491 CCER2I3L3R5 266 aa26.8■■□□□ 1.88
TSSC4-207ENST00000451491 AMOTQ4VCS5 1084 aa26.8■■□□□ 1.88
TSSC4-207ENST00000451491 PLEKHO1Q53GL0 409 aaPredicted RBP26.8■■□□□ 1.88
TSSC4-207ENST00000451491 MARCH10Q8NA82 808 aaPredicted RBP26.8■■□□□ 1.88
TSSC4-207ENST00000451491 PCDH11XQ9BZA7 1347 aa26.79■■□□□ 1.88
TSSC4-207ENST00000451491 PCDH11YQ9BZA8 1340 aa26.79■■□□□ 1.88
TSSC4-207ENST00000451491 SOCS7O14512 581 aa26.79■■□□□ 1.88
TSSC4-207ENST00000451491 PNISRQ8TF01 805 aaKnown RBP26.79■■□□□ 1.88
TSSC4-207ENST00000451491 ADAMTS8Q9UP79 889 aa26.79■■□□□ 1.88
TSSC4-207ENST00000451491 DDX54Q8TDD1 881 aaKnown RBP26.78■■□□□ 1.88
TSSC4-207ENST00000451491 PLEKHF1Q96S99 279 aa26.77■■□□□ 1.88
TSSC4-207ENST00000451491 CYP27B1O15528 508 aa26.76■■□□□ 1.87
TSSC4-207ENST00000451491 FAM182BQ5T319 152 aa26.76■■□□□ 1.87
TSSC4-207ENST00000451491 PNNQ9H307 717 aaKnown RBP26.76■■□□□ 1.87
TSSC4-207ENST00000451491 PHACTR3Q96KR7 559 aa26.75■■□□□ 1.87
TSSC4-207ENST00000451491 BCL9O00512 1426 aa26.74■■□□□ 1.87
TSSC4-207ENST00000451491 MTHFSDQ2M296 383 aaKnown RBP26.73■■□□□ 1.87
TSSC4-207ENST00000451491 ZNF530Q6P9A1 599 aaPredicted RBP26.73■■□□□ 1.87
TSSC4-207ENST00000451491 IFNL2Q8IZJ0 200 aa26.73■■□□□ 1.87
TSSC4-207ENST00000451491 PHKG2P15735 406 aa26.72■■□□□ 1.87
TSSC4-207ENST00000451491 FAM196AQ6ZSG2 479 aa26.72■■□□□ 1.87
TSSC4-207ENST00000451491 GAS2L2Q8NHY3 880 aa26.71■■□□□ 1.87
TSSC4-207ENST00000451491 SBF2Q86WG5 1849 aa26.7■■□□□ 1.87
TSSC4-207ENST00000451491 NEFMP07197 916 aa26.7■■□□□ 1.86
TSSC4-207ENST00000451491 NKX1-1Q15270 411 aaPredicted RBP26.7■■□□□ 1.86
TSSC4-207ENST00000451491 EP400Q96L91 3159 aa26.7■■□□□ 1.86
TSSC4-207ENST00000451491 MAPK8IP3Q9UPT6 1336 aa26.68■■□□□ 1.86
TSSC4-207ENST00000451491 C1orf141Q5JVX7 400 aa26.68■■□□□ 1.86
TSSC4-207ENST00000451491 RUNDC1Q96C34 613 aa26.68■■□□□ 1.86
TSSC4-207ENST00000451491 AKAP4Q5JQC9 854 aa26.67■■□□□ 1.86
TSSC4-207ENST00000451491 CCDC146Q8IYE0 955 aa26.67■■□□□ 1.86
TSSC4-207ENST00000451491 DOT1LQ8TEK3 1739 aa26.66■■□□□ 1.86
TSSC4-207ENST00000451491 FAM9BQ8IZU0 186 aa26.65■■□□□ 1.86
TSSC4-207ENST00000451491 TOGARAM1Q9Y4F4 1720 aa26.65■■□□□ 1.86
TSSC4-207ENST00000451491 DLG5Q8TDM6 1919 aa26.65■■□□□ 1.86
TSSC4-207ENST00000451491 VIRMAQ69YN4 1812 aaKnown RBP26.65■■□□□ 1.86
TSSC4-207ENST00000451491 HSP90AB1P08238 724 aaKnown RBP26.65■■□□□ 1.86
TSSC4-207ENST00000451491 SCN11AQ9UI33 1791 aa26.63■■□□□ 1.85
TSSC4-207ENST00000451491 MAP3K5Q99683 1374 aa26.63■■□□□ 1.85
TSSC4-207ENST00000451491 KAT6BQ8WYB5 2073 aa26.63■■□□□ 1.85
TSSC4-207ENST00000451491 NHSQ6T4R5 1651 aa26.63■■□□□ 1.85
TSSC4-207ENST00000451491 ADAMTS7Q9UKP4 1686 aa26.63■■□□□ 1.85
TSSC4-207ENST00000451491 DCAF5Q96JK2 942 aa26.63■■□□□ 1.85
TSSC4-207ENST00000451491 KDM6AO15550 1401 aaPredicted RBP26.63■■□□□ 1.85
TSSC4-207ENST00000451491 NFE2L2Q16236 605 aa26.62■■□□□ 1.85
TSSC4-207ENST00000451491 GNAT3A8MTJ3 354 aa26.61■■□□□ 1.85
TSSC4-207ENST00000451491 ITGB4P16144 1822 aa26.6■■□□□ 1.85
TSSC4-207ENST00000451491 MPRIPQ6WCQ1 1025 aa26.6■■□□□ 1.85
TSSC4-207ENST00000451491 ACSBG1Q96GR2 724 aa26.6■■□□□ 1.85
TSSC4-207ENST00000451491 TMPOP42166 694 aaKnown RBP26.59■■□□□ 1.85
TSSC4-207ENST00000451491 TRIM37O94972 964 aa26.58■■□□□ 1.85
TSSC4-207ENST00000451491 TNS1Q9HBL0 1735 aaKnown RBP26.58■■□□□ 1.85
TSSC4-207ENST00000451491 KCNQ2O43526 872 aa26.57■■□□□ 1.84
TSSC4-207ENST00000451491 RNMTO43148 476 aaKnown RBP26.56■■□□□ 1.84
TSSC4-207ENST00000451491 HTATSF1O43719 755 aaKnown RBP26.56■■□□□ 1.84
TSSC4-207ENST00000451491 PRIM1P49642 420 aaKnown RBP26.56■■□□□ 1.84
TSSC4-207ENST00000451491 BCL11BQ9C0K0 894 aaPredicted RBP26.56■■□□□ 1.84
TSSC4-207ENST00000451491 LGR6Q9HBX8 967 aa26.56■■□□□ 1.84
TSSC4-207ENST00000451491 ERVV-2B6SEH9 535 aa26.56■■□□□ 1.84
TSSC4-207ENST00000451491 APAF1O14727 1248 aa26.56■■□□□ 1.84
TSSC4-207ENST00000451491 PTF1AQ7RTS3 328 aa26.56■■□□□ 1.84
TSSC4-207ENST00000451491 RIPK4P57078 832 aa26.55■■□□□ 1.84
TSSC4-207ENST00000451491 IL17REQ8NFR9 667 aa26.55■■□□□ 1.84
TSSC4-207ENST00000451491 BTAF1O14981 1849 aa26.54■■□□□ 1.84
TSSC4-207ENST00000451491 CEMIPQ8WUJ3 1361 aa26.54■■□□□ 1.84
TSSC4-207ENST00000451491 CCDC125Q86Z20 511 aa26.54■■□□□ 1.84
TSSC4-207ENST00000451491 RTF1Q92541 710 aaKnown RBP26.54■■□□□ 1.84
TSSC4-207ENST00000451491 UPF1Q92900 1129 aaKnown RBP eCLIP26.54■■□□□ 1.84
TSSC4-207ENST00000451491 SYTL4Q96C24 671 aaPredicted RBP26.54■■□□□ 1.84
TSSC4-207ENST00000451491 RRP7AQ9Y3A4 280 aaKnown RBP26.54■■□□□ 1.84
TSSC4-207ENST00000451491 MRC1P22897 1456 aa26.54■■□□□ 1.84
TSSC4-207ENST00000451491 NEUROD2Q15784 382 aa26.52■■□□□ 1.84
TSSC4-207ENST00000451491 DCTN1Q14203 1278 aa26.5■■□□□ 1.83
TSSC4-207ENST00000451491 MCM10Q7L590 875 aa26.5■■□□□ 1.83
TSSC4-207ENST00000451491 TMOD3Q9NYL9 352 aa26.5■■□□□ 1.83
TSSC4-207ENST00000451491 SIPA1L3O60292 1781 aaPredicted RBP26.5■■□□□ 1.83
TSSC4-207ENST00000451491 CABP4P57796 275 aa26.49■■□□□ 1.83
TSSC4-207ENST00000451491 LMOD3Q0VAK6 560 aa26.49■■□□□ 1.83
TSSC4-207ENST00000451491 PIGBQ92521 554 aa26.49■■□□□ 1.83
TSSC4-207ENST00000451491 SLC52A2Q9HAB3 445 aa26.49■■□□□ 1.83
TSSC4-207ENST00000451491 NFATC2IPQ8NCF5 419 aa26.48■■□□□ 1.83
TSSC4-207ENST00000451491 TRIM35Q9UPQ4 493 aa26.48■■□□□ 1.83
TSSC4-207ENST00000451491 SF3B2Q13435 895 aaKnown RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms