RNA–Protein interactions for RNA: ENST00000450894.7

ITGB4-203, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-203ENST00000450894 C9orf84Q5VXU9 1444 aa16.5■□□□□ 0.23
ITGB4-203ENST00000450894 LRSAM1Q6UWE0 723 aa16.5■□□□□ 0.23
ITGB4-203ENST00000450894 NEUROD6Q96NK8 337 aa16.5■□□□□ 0.23
ITGB4-203ENST00000450894 DDX19AQ9NUU7 478 aaKnown RBP16.5■□□□□ 0.23
ITGB4-203ENST00000450894 PRKAR2BP31323 418 aa16.5■□□□□ 0.23
ITGB4-203ENST00000450894 MICALCLQ6ZW33 695 aa16.5■□□□□ 0.23
ITGB4-203ENST00000450894 CCDC171Q6TFL3 1326 aa16.5■□□□□ 0.23
ITGB4-203ENST00000450894 PRDM2Q13029 1718 aa16.5■□□□□ 0.23
ITGB4-203ENST00000450894 SSFA2P28290 1259 aa16.49■□□□□ 0.23
ITGB4-203ENST00000450894 TERF1P54274 439 aa16.49■□□□□ 0.23
ITGB4-203ENST00000450894 TAX1BP1Q86VP1 789 aa16.49■□□□□ 0.23
ITGB4-203ENST00000450894 GPATCH11Q8N954 259 aa16.49■□□□□ 0.23
ITGB4-203ENST00000450894 CCDC94Q9BW85 323 aaPredicted RBP16.49■□□□□ 0.23
ITGB4-203ENST00000450894 C1orf115Q9H7X2 142 aa16.49■□□□□ 0.23
ITGB4-203ENST00000450894 BAG4O95429 457 aaKnown RBP16.49■□□□□ 0.23
ITGB4-203ENST00000450894 HMOX1P09601 288 aa16.49■□□□□ 0.23
ITGB4-203ENST00000450894 RARSP54136 660 aaKnown RBP16.49■□□□□ 0.23
ITGB4-203ENST00000450894 BLOC1S2Q6QNY1 142 aa16.49■□□□□ 0.23
ITGB4-203ENST00000450894 KRT222Q8N1A0 295 aa16.49■□□□□ 0.23
ITGB4-203ENST00000450894 SNX21Q969T3 373 aa16.49■□□□□ 0.23
ITGB4-203ENST00000450894 STIM1Q13586 685 aa16.49■□□□□ 0.23
ITGB4-203ENST00000450894 BMP2KLQ5H9B9 411 aa16.49■□□□□ 0.23
ITGB4-203ENST00000450894 GGNBP2Q9H3C7 697 aa16.49■□□□□ 0.23
ITGB4-203ENST00000450894 ANKRD30BQ9BXX2 1392 aa16.49■□□□□ 0.23
ITGB4-203ENST00000450894 TSR2Q969E8 191 aaKnown RBP16.48■□□□□ 0.23
ITGB4-203ENST00000450894 CDKL5O76039 1030 aa16.48■□□□□ 0.23
ITGB4-203ENST00000450894 DHX37Q8IY37 1157 aaKnown RBP16.48■□□□□ 0.23
ITGB4-203ENST00000450894 LRRFIP2Q9Y608 721 aaKnown RBP16.48■□□□□ 0.23
ITGB4-203ENST00000450894 GTF2F1P35269 517 aaKnown RBP eCLIP16.48■□□□□ 0.23
ITGB4-203ENST00000450894 RBM25P49756 843 aaKnown RBP16.48■□□□□ 0.23
ITGB4-203ENST00000450894 SYCP1Q15431 976 aa16.48■□□□□ 0.23
ITGB4-203ENST00000450894 VPS37DQ86XT2 251 aa16.48■□□□□ 0.23
ITGB4-203ENST00000450894 EPB41L2O43491 1005 aaKnown RBP16.47■□□□□ 0.23
ITGB4-203ENST00000450894 ARHGAP29Q52LW3 1261 aa16.47■□□□□ 0.23
ITGB4-203ENST00000450894 CLIP2Q9UDT6 1046 aa16.47■□□□□ 0.23
ITGB4-203ENST00000450894 ZKSCAN5Q9Y2L8 839 aa16.47■□□□□ 0.23
ITGB4-203ENST00000450894 CASQ1P31415 396 aa16.47■□□□□ 0.23
ITGB4-203ENST00000450894 ZSCAN23Q3MJ62 389 aa16.47■□□□□ 0.23
ITGB4-203ENST00000450894 CDK5RAP3Q96JB5 506 aa16.47■□□□□ 0.23
ITGB4-203ENST00000450894 ATP2B1P20020 1258 aa16.46■□□□□ 0.23
ITGB4-203ENST00000450894 CTDP1Q9Y5B0 961 aaPredicted RBP16.46■□□□□ 0.23
ITGB4-203ENST00000450894 TRERF1Q96PN7 1200 aa16.46■□□□□ 0.23
ITGB4-203ENST00000450894 CCAR1Q8IX12 1150 aaKnown RBP16.46■□□□□ 0.23
ITGB4-203ENST00000450894 POLR3GO15318 223 aaPredicted RBP16.46■□□□□ 0.22
ITGB4-203ENST00000450894 KDM4AO75164 1064 aa16.46■□□□□ 0.22
ITGB4-203ENST00000450894 FCHSD2O94868 740 aa16.46■□□□□ 0.22
ITGB4-203ENST00000450894 SLC26A8Q96RN1 970 aa16.46■□□□□ 0.22
ITGB4-203ENST00000450894 TMEM57Q8N5G2 664 aa16.45■□□□□ 0.22
ITGB4-203ENST00000450894 STK3Q13188 491 aa16.45■□□□□ 0.22
ITGB4-203ENST00000450894 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.45■□□□□ 0.22
ITGB4-203ENST00000450894 CCDC141Q6ZP82 1450 aa16.45■□□□□ 0.22
ITGB4-203ENST00000450894 ADCY5O95622 1261 aa16.45■□□□□ 0.22
ITGB4-203ENST00000450894 EZRP15311 586 aaKnown RBP16.45■□□□□ 0.22
ITGB4-203ENST00000450894 CCDC83Q8IWF9 413 aa16.45■□□□□ 0.22
ITGB4-203ENST00000450894 ANKRD62A6NC57 917 aa16.44■□□□□ 0.22
ITGB4-203ENST00000450894 RAB11FIP3O75154 756 aa16.44■□□□□ 0.22
ITGB4-203ENST00000450894 DUSP27Q5VZP5 1158 aa16.44■□□□□ 0.22
ITGB4-203ENST00000450894 RIC3Q7Z5B4 369 aa16.44■□□□□ 0.22
ITGB4-203ENST00000450894 JAKMIP3Q5VZ66 844 aa16.44■□□□□ 0.22
ITGB4-203ENST00000450894 IVLP07476 585 aa16.44■□□□□ 0.22
ITGB4-203ENST00000450894 USP25Q9UHP3 1055 aa16.44■□□□□ 0.22
ITGB4-203ENST00000450894 KIF5CO60282 957 aa16.44■□□□□ 0.22
ITGB4-203ENST00000450894 C20orf194Q5TEA3 1177 aa16.44■□□□□ 0.22
ITGB4-203ENST00000450894 STK11IPQ8N1F8 1099 aa16.44■□□□□ 0.22
ITGB4-203ENST00000450894 CCDC150Q8NCX0 1101 aa16.44■□□□□ 0.22
ITGB4-203ENST00000450894 JAKMIP1Q96N16 626 aaKnown RBP16.44■□□□□ 0.22
ITGB4-203ENST00000450894 KIAA1328Q86T90 577 aa16.43■□□□□ 0.22
ITGB4-203ENST00000450894 TICAM2Q86XR7 235 aa16.43■□□□□ 0.22
ITGB4-203ENST00000450894 FEZ1Q99689 392 aa16.43■□□□□ 0.22
ITGB4-203ENST00000450894 URI1O94763 535 aaPredicted RBP16.43■□□□□ 0.22
ITGB4-203ENST00000450894 UBE2HP62256 183 aa16.43■□□□□ 0.22
ITGB4-203ENST00000450894 CTR9Q6PD62 1173 aa16.43■□□□□ 0.22
ITGB4-203ENST00000450894 RPRD2Q5VT52 1461 aaKnown RBP16.43■□□□□ 0.22
ITGB4-203ENST00000450894 CFAP100Q494V2 611 aa16.42■□□□□ 0.22
ITGB4-203ENST00000450894 TBC1D2BQ9UPU7 963 aa16.42■□□□□ 0.22
ITGB4-203ENST00000450894 TRIM22Q8IYM9 498 aa16.42■□□□□ 0.22
ITGB4-203ENST00000450894 TROQ12816 1431 aaPredicted RBP16.42■□□□□ 0.22
ITGB4-203ENST00000450894 PTPN23Q9H3S7 1636 aa16.42■□□□□ 0.22
ITGB4-203ENST00000450894 SPDYE4A6NLX3 237 aa16.42■□□□□ 0.22
ITGB4-203ENST00000450894 NOLC1Q14978 699 aaKnown RBP eCLIP16.42■□□□□ 0.22
ITGB4-203ENST00000450894 GTF2A1P52655 376 aaPredicted RBP16.42■□□□□ 0.22
ITGB4-203ENST00000450894 MAP2K1Q02750 393 aaPredicted RBP16.42■□□□□ 0.22
ITGB4-203ENST00000450894 HDAC1Q13547 482 aaPredicted RBP16.42■□□□□ 0.22
ITGB4-203ENST00000450894 WASF1Q92558 559 aa16.42■□□□□ 0.22
ITGB4-203ENST00000450894 TAF4BQ92750 862 aa16.42■□□□□ 0.22
ITGB4-203ENST00000450894 SLC4A2P04920 1241 aa16.41■□□□□ 0.22
ITGB4-203ENST00000450894 CEP135Q66GS9 1140 aa16.41■□□□□ 0.22
ITGB4-203ENST00000450894 CABP2Q9NPB3 220 aa16.41■□□□□ 0.22
ITGB4-203ENST00000450894 BBXQ8WY36 941 aaPredicted RBP16.41■□□□□ 0.22
ITGB4-203ENST00000450894 CTNNA3Q9UI47 895 aa16.41■□□□□ 0.22
ITGB4-203ENST00000450894 ARHGAP5Q13017 1502 aa16.41■□□□□ 0.22
ITGB4-203ENST00000450894 IPO4Q8TEX9 1081 aaKnown RBP16.41■□□□□ 0.22
ITGB4-203ENST00000450894 ATAD2Q6PL18 1390 aa16.41■□□□□ 0.22
ITGB4-203ENST00000450894 STX1AQ16623 288 aa16.41■□□□□ 0.22
ITGB4-203ENST00000450894 GBP2P32456 591 aaPredicted RBP16.4■□□□□ 0.22
ITGB4-203ENST00000450894 NOL7Q9UMY1 257 aaKnown RBP16.4■□□□□ 0.22
ITGB4-203ENST00000450894 NCAPD3P42695 1498 aa16.4■□□□□ 0.22
ITGB4-203ENST00000450894 CAMK4Q16566 473 aa16.4■□□□□ 0.22
ITGB4-203ENST00000450894 RAD54L2Q9Y4B4 1467 aa16.4■□□□□ 0.22
ITGB4-203ENST00000450894 TUBB4BP68371 445 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms