RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ZCRB1Q8TBF4 217 aaKnown RBP23.38■■□□□ 1.33
PRPF40A-204ENST00000450303 TXNRD1Q16881 649 aa23.37■■□□□ 1.33
PRPF40A-204ENST00000450303 BTAF1O14981 1849 aa23.36■■□□□ 1.33
PRPF40A-204ENST00000450303 ZNF316A6NFI3 1004 aaPredicted RBP23.36■■□□□ 1.33
PRPF40A-204ENST00000450303 ANO8Q9HCE9 1232 aaPredicted RBP23.36■■□□□ 1.33
PRPF40A-204ENST00000450303 KIF24Q5T7B8 1368 aa23.36■■□□□ 1.33
PRPF40A-204ENST00000450303 SHANK3Q9BYB0 1731 aa23.36■■□□□ 1.33
PRPF40A-204ENST00000450303 RAPGEF4Q8WZA2 1011 aa23.35■■□□□ 1.33
PRPF40A-204ENST00000450303 ANKRD26Q9UPS8 1709 aa23.35■■□□□ 1.33
PRPF40A-204ENST00000450303 TATP17735 454 aaPredicted RBP23.34■■□□□ 1.33
PRPF40A-204ENST00000450303 POLKQ9UBT6 870 aa23.34■■□□□ 1.33
PRPF40A-204ENST00000450303 SYTL4Q96C24 671 aaPredicted RBP23.32■■□□□ 1.32
PRPF40A-204ENST00000450303 WASHC2AQ641Q2 1341 aa23.32■■□□□ 1.32
PRPF40A-204ENST00000450303 PRIM1P49642 420 aaKnown RBP23.31■■□□□ 1.32
PRPF40A-204ENST00000450303 DOT1LQ8TEK3 1739 aa23.3■■□□□ 1.32
PRPF40A-204ENST00000450303 KIF7Q2M1P5 1343 aa23.3■■□□□ 1.32
PRPF40A-204ENST00000450303 PDGFDQ9GZP0 370 aaPredicted RBP23.28■■□□□ 1.32
PRPF40A-204ENST00000450303 STK32BQ9NY57 414 aa23.28■■□□□ 1.32
PRPF40A-204ENST00000450303 MORC1Q86VD1 984 aa23.27■■□□□ 1.32
PRPF40A-204ENST00000450303 EYA1Q99502 592 aa23.27■■□□□ 1.32
PRPF40A-204ENST00000450303 KNSTRNQ9Y448 316 aa23.27■■□□□ 1.32
PRPF40A-204ENST00000450303 EIF4A2Q14240 407 aaKnown RBP23.25■■□□□ 1.31
PRPF40A-204ENST00000450303 SLC15A2Q16348 729 aa23.25■■□□□ 1.31
PRPF40A-204ENST00000450303 LRRC4BQ9NT99 713 aa23.24■■□□□ 1.31
PRPF40A-204ENST00000450303 KCNQ4P56696 695 aa23.23■■□□□ 1.31
PRPF40A-204ENST00000450303 SPON1Q9HCB6 807 aa23.23■■□□□ 1.31
PRPF40A-204ENST00000450303 PCDH11XQ9BZA7 1347 aa23.23■■□□□ 1.31
PRPF40A-204ENST00000450303 PCDH11YQ9BZA8 1340 aa23.23■■□□□ 1.31
PRPF40A-204ENST00000450303 NSD2O96028 1365 aa23.23■■□□□ 1.31
PRPF40A-204ENST00000450303 CASZ1Q86V15 1759 aa23.22■■□□□ 1.31
PRPF40A-204ENST00000450303 CYP27B1O15528 508 aa23.22■■□□□ 1.31
PRPF40A-204ENST00000450303 NCAPD2Q15021 1401 aa23.21■■□□□ 1.31
PRPF40A-204ENST00000450303 ZBTB7AO95365 584 aa23.2■■□□□ 1.3
PRPF40A-204ENST00000450303 PKD1L3Q7Z443 1732 aa23.19■■□□□ 1.3
PRPF40A-204ENST00000450303 ZNF827Q17R98 1081 aa23.19■■□□□ 1.3
PRPF40A-204ENST00000450303 PAPPAQ13219 1627 aa23.19■■□□□ 1.3
PRPF40A-204ENST00000450303 AMER1Q5JTC6 1135 aaPredicted RBP23.18■■□□□ 1.3
PRPF40A-204ENST00000450303 PPP1R1BQ9UD71 204 aaPredicted RBP23.18■■□□□ 1.3
PRPF40A-204ENST00000450303 SPG7Q9UQ90 795 aa23.18■■□□□ 1.3
PRPF40A-204ENST00000450303 ATF5Q9Y2D1 282 aaPredicted RBP23.18■■□□□ 1.3
PRPF40A-204ENST00000450303 SLC27A3Q5K4L6 730 aa23.16■■□□□ 1.3
PRPF40A-204ENST00000450303 MPRIPQ6WCQ1 1025 aa23.16■■□□□ 1.3
PRPF40A-204ENST00000450303 LY75O60449 1722 aa23.16■■□□□ 1.3
PRPF40A-204ENST00000450303 CNGB1Q14028 1251 aaPredicted RBP23.15■■□□□ 1.3
PRPF40A-204ENST00000450303 TOGARAM1Q9Y4F4 1720 aa23.15■■□□□ 1.3
PRPF40A-204ENST00000450303 ITGB4P16144 1822 aa23.15■■□□□ 1.3
PRPF40A-204ENST00000450303 PER1O15534 1290 aaPredicted RBP23.14■■□□□ 1.29
PRPF40A-204ENST00000450303 IGSF1Q8N6C5 1336 aa23.13■■□□□ 1.29
PRPF40A-204ENST00000450303 CC2D1BQ5T0F9 858 aaKnown RBP23.13■■□□□ 1.29
PRPF40A-204ENST00000450303 AKT1S1Q96B36 256 aa23.13■■□□□ 1.29
PRPF40A-204ENST00000450303 CCNL1Q9UK58 526 aaPredicted RBP23.13■■□□□ 1.29
PRPF40A-204ENST00000450303 NKX1-1Q15270 411 aaPredicted RBP23.11■■□□□ 1.29
PRPF40A-204ENST00000450303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.11■■□□□ 1.29
PRPF40A-204ENST00000450303 PHKG2P15735 406 aa23.1■■□□□ 1.29
PRPF40A-204ENST00000450303 IFNL2Q8IZJ0 200 aa23.1■■□□□ 1.29
PRPF40A-204ENST00000450303 PTGER2P43116 358 aa23.09■■□□□ 1.29
PRPF40A-204ENST00000450303 AEBP1Q8IUX7 1158 aa23.09■■□□□ 1.29
PRPF40A-204ENST00000450303 PIGBQ92521 554 aa23.09■■□□□ 1.29
PRPF40A-204ENST00000450303 TUBGCP6Q96RT7 1819 aa23.08■■□□□ 1.29
PRPF40A-204ENST00000450303 MTHFSP49914 203 aa23.08■■□□□ 1.29
PRPF40A-204ENST00000450303 MTFR1LQ9H019 292 aa23.08■■□□□ 1.29
PRPF40A-204ENST00000450303 TFCP2L1Q9NZI6 479 aa23.08■■□□□ 1.29
PRPF40A-204ENST00000450303 PALLDQ8WX93 1383 aa23.07■■□□□ 1.28
PRPF40A-204ENST00000450303 IL13P35225 146 aa23.06■■□□□ 1.28
PRPF40A-204ENST00000450303 DDX10Q13206 875 aaKnown RBP23.06■■□□□ 1.28
PRPF40A-204ENST00000450303 SULT6B1Q6IMI4 303 aa23.06■■□□□ 1.28
PRPF40A-204ENST00000450303 PNPLA7Q6ZV29 1317 aa23.06■■□□□ 1.28
PRPF40A-204ENST00000450303 PLEKHO1Q53GL0 409 aaPredicted RBP23.05■■□□□ 1.28
PRPF40A-204ENST00000450303 TMOD3Q9NYL9 352 aa23.04■■□□□ 1.28
PRPF40A-204ENST00000450303 QSER1Q2KHR3 1735 aa23.04■■□□□ 1.28
PRPF40A-204ENST00000450303 ZNF530Q6P9A1 599 aaPredicted RBP23.03■■□□□ 1.28
PRPF40A-204ENST00000450303 SMARCC1Q92922 1105 aaPredicted RBP23.03■■□□□ 1.28
PRPF40A-204ENST00000450303 SGIP1Q9BQI5 828 aa23.02■■□□□ 1.28
PRPF40A-204ENST00000450303 TAF1LQ8IZX4 1826 aa23.02■■□□□ 1.28
PRPF40A-204ENST00000450303 C5P01031 1676 aa23.02■■□□□ 1.28
PRPF40A-204ENST00000450303 MSH5O43196 834 aa23.01■■□□□ 1.27
PRPF40A-204ENST00000450303 ASAP1Q9ULH1 1129 aa23.01■■□□□ 1.27
PRPF40A-204ENST00000450303 AMOTQ4VCS5 1084 aa23■■□□□ 1.27
PRPF40A-204ENST00000450303 HMOX1P09601 288 aa22.98■■□□□ 1.27
PRPF40A-204ENST00000450303 COL23A1Q86Y22 540 aaPredicted RBP22.98■■□□□ 1.27
PRPF40A-204ENST00000450303 SLC16A10Q8TF71 515 aa22.98■■□□□ 1.27
PRPF40A-204ENST00000450303 ARXQ96QS3 562 aa22.98■■□□□ 1.27
PRPF40A-204ENST00000450303 FHDC1Q9C0D6 1143 aaPredicted RBP22.98■■□□□ 1.27
PRPF40A-204ENST00000450303 ATG3Q9NT62 314 aa22.98■■□□□ 1.27
PRPF40A-204ENST00000450303 PLEKHG2Q9H7P9 1386 aa22.98■■□□□ 1.27
PRPF40A-204ENST00000450303 DCAF5Q96JK2 942 aa22.97■■□□□ 1.27
PRPF40A-204ENST00000450303 NPC1L1Q9UHC9 1359 aa22.97■■□□□ 1.27
PRPF40A-204ENST00000450303 LOC102724428A0A0B4J2F2 783 aa22.96■■□□□ 1.27
PRPF40A-204ENST00000450303 DIAPH1O60610 1272 aaKnown RBP22.96■■□□□ 1.27
PRPF40A-204ENST00000450303 HSP90AB1P08238 724 aaKnown RBP22.96■■□□□ 1.27
PRPF40A-204ENST00000450303 SIK1P57059 783 aa22.96■■□□□ 1.27
PRPF40A-204ENST00000450303 C1orf141Q5JVX7 400 aa22.96■■□□□ 1.27
PRPF40A-204ENST00000450303 KDRP35968 1356 aa22.96■■□□□ 1.27
PRPF40A-204ENST00000450303 ERVV-2B6SEH9 535 aa22.95■■□□□ 1.26
PRPF40A-204ENST00000450303 KDM6AO15550 1401 aaPredicted RBP22.95■■□□□ 1.26
PRPF40A-204ENST00000450303 SMIM5Q71RC9 77 aa22.95■■□□□ 1.26
PRPF40A-204ENST00000450303 C4BP0C0L5 1744 aa22.94■■□□□ 1.26
PRPF40A-204ENST00000450303 CABP4P57796 275 aa22.94■■□□□ 1.26
PRPF40A-204ENST00000450303 SYT17Q9BSW7 474 aa22.94■■□□□ 1.26
PRPF40A-204ENST00000450303 ATP6V1AP38606 617 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms