RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 C8orf58Q8NAV2 365 aa22.69■■□□□ 1.22
LMNA-208ENST00000448611 TCERG1O14776 1098 aaKnown RBP22.69■■□□□ 1.22
LMNA-208ENST00000448611 TWISTNBQ3B726 338 aaPredicted RBP22.69■■□□□ 1.22
LMNA-208ENST00000448611 FTSJ3Q8IY81 847 aaKnown RBP22.69■■□□□ 1.22
LMNA-208ENST00000448611 TOM1O60784 492 aa22.68■■□□□ 1.22
LMNA-208ENST00000448611 IPO8O15397 1037 aaKnown RBP22.67■■□□□ 1.22
LMNA-208ENST00000448611 UBAP1LF5GYI3 381 aa22.67■■□□□ 1.22
LMNA-208ENST00000448611 HTATSF1O43719 755 aaKnown RBP22.67■■□□□ 1.22
LMNA-208ENST00000448611 NBPF6Q5VWK0 638 aa22.67■■□□□ 1.22
LMNA-208ENST00000448611 MRPL50Q8N5N7 158 aaKnown RBP22.67■■□□□ 1.22
LMNA-208ENST00000448611 RTF1Q92541 710 aaKnown RBP22.67■■□□□ 1.22
LMNA-208ENST00000448611 NBPF4Q96M43 638 aa22.67■■□□□ 1.22
LMNA-208ENST00000448611 MED1Q15648 1581 aaPredicted RBP22.66■■□□□ 1.22
LMNA-208ENST00000448611 ZBTB7CA1YPR0 619 aa22.66■■□□□ 1.22
LMNA-208ENST00000448611 ELL2O00472 640 aaPredicted RBP22.66■■□□□ 1.22
LMNA-208ENST00000448611 USHBP1Q8N6Y0 703 aa22.66■■□□□ 1.22
LMNA-208ENST00000448611 DDX17Q92841 729 aaKnown RBP22.66■■□□□ 1.22
LMNA-208ENST00000448611 NPHP3Q7Z494 1330 aa22.66■■□□□ 1.22
LMNA-208ENST00000448611 BRINP3Q76B58 766 aa22.65■■□□□ 1.22
LMNA-208ENST00000448611 IGHDP01880 384 aa22.65■■□□□ 1.22
LMNA-208ENST00000448611 KIAA0232Q92628 1395 aa22.64■■□□□ 1.22
LMNA-208ENST00000448611 LRRC37A3O60309 1634 aa22.64■■□□□ 1.22
LMNA-208ENST00000448611 PXDNQ92626 1479 aa22.64■■□□□ 1.21
LMNA-208ENST00000448611 PLEKHG5O94827 1062 aa22.63■■□□□ 1.21
LMNA-208ENST00000448611 PIP4K2BP78356 416 aa22.63■■□□□ 1.21
LMNA-208ENST00000448611 NCAPD2Q15021 1401 aa22.63■■□□□ 1.21
LMNA-208ENST00000448611 GNAT3A8MTJ3 354 aa22.63■■□□□ 1.21
LMNA-208ENST00000448611 SKAP1Q86WV1 359 aa22.63■■□□□ 1.21
LMNA-208ENST00000448611 MAP3K5Q99683 1374 aa22.62■■□□□ 1.21
LMNA-208ENST00000448611 ARHGAP45Q92619 1136 aa22.62■■□□□ 1.21
LMNA-208ENST00000448611 PCDHB15Q9Y5E8 787 aa22.62■■□□□ 1.21
LMNA-208ENST00000448611 RGPD2P0DJD1 1756 aa22.62■■□□□ 1.21
LMNA-208ENST00000448611 TNS3Q68CZ2 1445 aa22.61■■□□□ 1.21
LMNA-208ENST00000448611 TMEM57Q8N5G2 664 aa22.61■■□□□ 1.21
LMNA-208ENST00000448611 LRRC59Q96AG4 307 aaKnown RBP22.61■■□□□ 1.21
LMNA-208ENST00000448611 DDX19BQ9UMR2 479 aa22.61■■□□□ 1.21
LMNA-208ENST00000448611 AXIN2Q9Y2T1 843 aa22.6■■□□□ 1.21
LMNA-208ENST00000448611 KRT24Q2M2I5 525 aa22.59■■□□□ 1.21
LMNA-208ENST00000448611 ANKRD24Q8TF21 1146 aa22.59■■□□□ 1.21
LMNA-208ENST00000448611 CAMTA1Q9Y6Y1 1673 aa22.59■■□□□ 1.21
LMNA-208ENST00000448611 HAP1P54257 671 aaPredicted RBP22.59■■□□□ 1.21
LMNA-208ENST00000448611 ITPRIPQ8IWB1 547 aa22.59■■□□□ 1.21
LMNA-208ENST00000448611 ROBO1Q9Y6N7 1651 aa22.58■■□□□ 1.21
LMNA-208ENST00000448611 SPATA31A3Q5VYP0 1347 aa22.57■■□□□ 1.2
LMNA-208ENST00000448611 IL17REQ8NFR9 667 aa22.57■■□□□ 1.2
LMNA-208ENST00000448611 MIS18AQ9NYP9 233 aa22.57■■□□□ 1.2
LMNA-208ENST00000448611 TSPYL4Q9UJ04 414 aa22.57■■□□□ 1.2
LMNA-208ENST00000448611 ZC3H6P61129 1189 aaKnown RBP22.56■■□□□ 1.2
LMNA-208ENST00000448611 CRYBG1Q9Y4K1 1723 aa22.55■■□□□ 1.2
LMNA-208ENST00000448611 ABCC4O15439 1325 aa22.54■■□□□ 1.2
LMNA-208ENST00000448611 ERBB3P21860 1342 aa22.54■■□□□ 1.2
LMNA-208ENST00000448611 RGPD5Q99666 1765 aa22.54■■□□□ 1.2
LMNA-208ENST00000448611 CEMIPQ8WUJ3 1361 aa22.53■■□□□ 1.2
LMNA-208ENST00000448611 ZBTB40Q9NUA8 1239 aa22.53■■□□□ 1.2
LMNA-208ENST00000448611 LMO7Q8WWI1 1683 aa22.53■■□□□ 1.2
LMNA-208ENST00000448611 BABAM1Q9NWV8 329 aa22.53■■□□□ 1.2
LMNA-208ENST00000448611 COL18A1P39060 1754 aa22.52■■□□□ 1.2
LMNA-208ENST00000448611 RWDD1Q9H446 243 aaPredicted RBP22.52■■□□□ 1.2
LMNA-208ENST00000448611 CABLES1Q8TDN4 633 aa22.51■■□□□ 1.19
LMNA-208ENST00000448611 API5Q9BZZ5 524 aaKnown RBP22.51■■□□□ 1.19
LMNA-208ENST00000448611 PDE4AP27815 886 aa22.51■■□□□ 1.19
LMNA-208ENST00000448611 AMOTQ4VCS5 1084 aa22.51■■□□□ 1.19
LMNA-208ENST00000448611 PLEKHO1Q53GL0 409 aaPredicted RBP22.51■■□□□ 1.19
LMNA-208ENST00000448611 ABCC6O95255 1503 aa22.5■■□□□ 1.19
LMNA-208ENST00000448611 TAF7Q15545 349 aaPredicted RBP22.5■■□□□ 1.19
LMNA-208ENST00000448611 SOS2Q07890 1332 aaPredicted RBP22.49■■□□□ 1.19
LMNA-208ENST00000448611 AKAP4Q5JQC9 854 aa22.49■■□□□ 1.19
LMNA-208ENST00000448611 BACH2Q9BYV9 841 aa22.49■■□□□ 1.19
LMNA-208ENST00000448611 CPDO75976 1380 aa22.48■■□□□ 1.19
LMNA-208ENST00000448611 NHSL1Q5SYE7 1610 aa22.48■■□□□ 1.19
LMNA-208ENST00000448611 HDAC1Q13547 482 aaPredicted RBP22.48■■□□□ 1.19
LMNA-208ENST00000448611 ZNF530Q6P9A1 599 aaPredicted RBP22.48■■□□□ 1.19
LMNA-208ENST00000448611 ZBTB7BO15156 539 aaPredicted RBP22.47■■□□□ 1.19
LMNA-208ENST00000448611 RGS12O14924 1447 aa22.47■■□□□ 1.19
LMNA-208ENST00000448611 RGS3P49796 1198 aa22.46■■□□□ 1.19
LMNA-208ENST00000448611 LGR6Q9HBX8 967 aa22.46■■□□□ 1.19
LMNA-208ENST00000448611 CHMP4BQ9H444 224 aaKnown RBP22.45■■□□□ 1.18
LMNA-208ENST00000448611 PTPRCP08575 1304 aa22.45■■□□□ 1.18
LMNA-208ENST00000448611 SOS1Q07889 1333 aaPredicted RBP22.45■■□□□ 1.18
LMNA-208ENST00000448611 FAM208AQ9UK61 1670 aaKnown RBP22.45■■□□□ 1.18
LMNA-208ENST00000448611 AHDC1Q5TGY3 1603 aaPredicted RBP22.44■■□□□ 1.18
LMNA-208ENST00000448611 OVOS2A0A0G2JMS6 1433 aa22.43■■□□□ 1.18
LMNA-208ENST00000448611 SLC4A2P04920 1241 aa22.43■■□□□ 1.18
LMNA-208ENST00000448611 CHRNA2Q15822 529 aa22.43■■□□□ 1.18
LMNA-208ENST00000448611 INTS3Q68E01 1043 aaKnown RBP22.42■■□□□ 1.18
LMNA-208ENST00000448611 NLRP2Q9NX02 1062 aa22.42■■□□□ 1.18
LMNA-208ENST00000448611 PHLPP1O60346 1717 aa22.42■■□□□ 1.18
LMNA-208ENST00000448611 C1orf141Q5JVX7 400 aa22.41■■□□□ 1.18
LMNA-208ENST00000448611 PDZRN3Q9UPQ7 1066 aa22.41■■□□□ 1.18
LMNA-208ENST00000448611 KDM3BQ7LBC6 1761 aa22.4■■□□□ 1.18
LMNA-208ENST00000448611 RNMTO43148 476 aaKnown RBP22.4■■□□□ 1.18
LMNA-208ENST00000448611 MPRIPQ6WCQ1 1025 aa22.4■■□□□ 1.18
LMNA-208ENST00000448611 CCDC30Q5VVM6 783 aa22.39■■□□□ 1.17
LMNA-208ENST00000448611 RAPGEF4Q8WZA2 1011 aa22.39■■□□□ 1.17
LMNA-208ENST00000448611 ADAMTS7Q9UKP4 1686 aa22.39■■□□□ 1.17
LMNA-208ENST00000448611 G2E3Q7L622 706 aa22.38■■□□□ 1.17
LMNA-208ENST00000448611 SMC5Q8IY18 1101 aa22.38■■□□□ 1.17
LMNA-208ENST00000448611 PLEKHG2Q9H7P9 1386 aa22.38■■□□□ 1.17
LMNA-208ENST00000448611 CSB-PGBD3P0DP91 1061 aa22.37■■□□□ 1.17
LMNA-208ENST00000448611 TEFQ10587 303 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms