RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 PTPRCP08575 1304 aa12.86□□□□□ -0.35
LINC00342-202ENST00000448494 MAP2K2P36507 400 aa12.86□□□□□ -0.35
LINC00342-202ENST00000448494 OS9Q13438 667 aaPredicted RBP12.86□□□□□ -0.35
LINC00342-202ENST00000448494 PACS2Q86VP3 889 aa12.86□□□□□ -0.35
LINC00342-202ENST00000448494 MPNDQ8N594 471 aa12.86□□□□□ -0.35
LINC00342-202ENST00000448494 SAMD9Q5K651 1589 aa12.86□□□□□ -0.35
LINC00342-202ENST00000448494 FAM135AQ9P2D6 1515 aa12.85□□□□□ -0.35
LINC00342-202ENST00000448494 SCAF11Q99590 1463 aaKnown RBP12.85□□□□□ -0.35
LINC00342-202ENST00000448494 JMYQ8N9B5 988 aa12.85□□□□□ -0.35
LINC00342-202ENST00000448494 ANKRD20A12PQ8NF67 263 aa12.85□□□□□ -0.35
LINC00342-202ENST00000448494 CEP170Q5SW79 1584 aa12.85□□□□□ -0.35
LINC00342-202ENST00000448494 KDM4AO75164 1064 aa12.85□□□□□ -0.35
LINC00342-202ENST00000448494 NAA30Q147X3 362 aaPredicted RBP12.85□□□□□ -0.35
LINC00342-202ENST00000448494 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00342-202ENST00000448494 ERO1AQ96HE7 468 aa12.85□□□□□ -0.35
LINC00342-202ENST00000448494 KLHL33A6NCF5 533 aa12.84□□□□□ -0.35
LINC00342-202ENST00000448494 TNNT1P13805 278 aa12.84□□□□□ -0.35
LINC00342-202ENST00000448494 WDR43Q15061 677 aaKnown RBP eCLIP12.84□□□□□ -0.35
LINC00342-202ENST00000448494 RRP7BPQ9NSQ0 103 aa12.84□□□□□ -0.35
LINC00342-202ENST00000448494 NSFL1CQ9UNZ2 370 aaKnown RBP12.84□□□□□ -0.35
LINC00342-202ENST00000448494 GRIN2AQ12879 1464 aa12.83□□□□□ -0.36
LINC00342-202ENST00000448494 OTUD6BQ8N6M0 293 aa12.83□□□□□ -0.36
LINC00342-202ENST00000448494 PPM1EQ8WY54 764 aa12.83□□□□□ -0.36
LINC00342-202ENST00000448494 TAOK2Q9UL54 1235 aa12.83□□□□□ -0.36
LINC00342-202ENST00000448494 FHOD1Q9Y613 1164 aa12.83□□□□□ -0.36
LINC00342-202ENST00000448494 TBC1D22AQ8WUA7 517 aa12.83□□□□□ -0.36
LINC00342-202ENST00000448494 PSD3Q9NYI0 1048 aa12.83□□□□□ -0.36
LINC00342-202ENST00000448494 TCOF1Q13428 1488 aaKnown RBP12.82□□□□□ -0.36
LINC00342-202ENST00000448494 LIG1P18858 919 aa12.82□□□□□ -0.36
LINC00342-202ENST00000448494 MMS22LQ6ZRQ5 1243 aa12.82□□□□□ -0.36
LINC00342-202ENST00000448494 ITFG2Q969R8 447 aa12.82□□□□□ -0.36
LINC00342-202ENST00000448494 TACO1Q9BSH4 297 aaKnown RBP12.82□□□□□ -0.36
LINC00342-202ENST00000448494 AK9Q5TCS8 1911 aa12.82□□□□□ -0.36
LINC00342-202ENST00000448494 NUP160Q12769 1436 aa12.82□□□□□ -0.36
LINC00342-202ENST00000448494 CPP00450 1065 aa12.81□□□□□ -0.36
LINC00342-202ENST00000448494 IVLP07476 585 aa12.81□□□□□ -0.36
LINC00342-202ENST00000448494 H2AFXP16104 143 aaPredicted RBP12.81□□□□□ -0.36
LINC00342-202ENST00000448494 ADAMTS12P58397 1594 aa12.81□□□□□ -0.36
LINC00342-202ENST00000448494 PLA2G4AP47712 749 aa12.8□□□□□ -0.36
LINC00342-202ENST00000448494 AK7Q96M32 723 aa12.8□□□□□ -0.36
LINC00342-202ENST00000448494 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.8□□□□□ -0.36
LINC00342-202ENST00000448494 HDAC1Q13547 482 aaPredicted RBP12.8□□□□□ -0.36
LINC00342-202ENST00000448494 MAP9Q49MG5 647 aa12.8□□□□□ -0.36
LINC00342-202ENST00000448494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.8□□□□□ -0.36
LINC00342-202ENST00000448494 GTF3C6Q969F1 213 aa12.8□□□□□ -0.36
LINC00342-202ENST00000448494 PNMA6AP0CW24 399 aaPredicted RBP12.79□□□□□ -0.36
LINC00342-202ENST00000448494 BIRC2Q13490 618 aa12.79□□□□□ -0.36
LINC00342-202ENST00000448494 E2F4Q16254 413 aa12.79□□□□□ -0.36
LINC00342-202ENST00000448494 SMARCE1Q969G3 411 aa12.79□□□□□ -0.36
LINC00342-202ENST00000448494 CALR3Q96L12 384 aaKnown RBP12.79□□□□□ -0.36
LINC00342-202ENST00000448494 C16orf45Q96MC5 204 aaPredicted RBP12.79□□□□□ -0.36
LINC00342-202ENST00000448494 CARD11Q9BXL7 1154 aa12.79□□□□□ -0.36
LINC00342-202ENST00000448494 ZNF215Q9UL58 517 aaPredicted RBP12.79□□□□□ -0.36
LINC00342-202ENST00000448494 ABCC2Q92887 1545 aa12.79□□□□□ -0.36
LINC00342-202ENST00000448494 ATP8B1O43520 1251 aa12.79□□□□□ -0.36
LINC00342-202ENST00000448494 PPP2R5AQ15172 486 aa12.79□□□□□ -0.36
LINC00342-202ENST00000448494 FAM210AQ96ND0 272 aa12.79□□□□□ -0.36
LINC00342-202ENST00000448494 ZDHHC9Q9Y397 364 aa12.79□□□□□ -0.36
LINC00342-202ENST00000448494 ST20-MTHFSA0A0A6YYL1 179 aa12.78□□□□□ -0.36
LINC00342-202ENST00000448494 PKP1Q13835 747 aa12.78□□□□□ -0.36
LINC00342-202ENST00000448494 ELF2Q15723 593 aa12.78□□□□□ -0.36
LINC00342-202ENST00000448494 FAM212AQ96EL1 285 aa12.78□□□□□ -0.36
LINC00342-202ENST00000448494 UBXN6Q9BZV1 441 aa12.78□□□□□ -0.36
LINC00342-202ENST00000448494 CEP135Q66GS9 1140 aa12.78□□□□□ -0.36
LINC00342-202ENST00000448494 NBPF3Q9H094 633 aa12.78□□□□□ -0.36
LINC00342-202ENST00000448494 BMP2KLQ5H9B9 411 aa12.77□□□□□ -0.36
LINC00342-202ENST00000448494 RTF1Q92541 710 aaKnown RBP12.77□□□□□ -0.36
LINC00342-202ENST00000448494 EXOC4Q96A65 974 aa12.77□□□□□ -0.36
LINC00342-202ENST00000448494 PSMD1Q99460 953 aa12.77□□□□□ -0.36
LINC00342-202ENST00000448494 KIF2AO00139 706 aaPredicted RBP12.77□□□□□ -0.37
LINC00342-202ENST00000448494 BORCS6Q96GS4 357 aa12.77□□□□□ -0.37
LINC00342-202ENST00000448494 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
LINC00342-202ENST00000448494 MRVI1Q9Y6F6 885 aa12.77□□□□□ -0.37
LINC00342-202ENST00000448494 SUPT6HQ7KZ85 1726 aaKnown RBP12.76□□□□□ -0.37
LINC00342-202ENST00000448494 H0YHG0 523 aa12.76□□□□□ -0.37
LINC00342-202ENST00000448494 ACTN2P35609 894 aa12.76□□□□□ -0.37
LINC00342-202ENST00000448494 ST5P78524 1137 aa12.76□□□□□ -0.37
LINC00342-202ENST00000448494 SARNPP82979 210 aaKnown RBP12.76□□□□□ -0.37
LINC00342-202ENST00000448494 EFCAB5A4FU69 1503 aa12.76□□□□□ -0.37
LINC00342-202ENST00000448494 SLU7O95391 586 aaKnown RBP12.76□□□□□ -0.37
LINC00342-202ENST00000448494 CCDC183Q5T5S1 534 aa12.76□□□□□ -0.37
LINC00342-202ENST00000448494 IFT57Q9NWB7 429 aa12.76□□□□□ -0.37
LINC00342-202ENST00000448494 FHOD3Q2V2M9 1422 aa12.75□□□□□ -0.37
LINC00342-202ENST00000448494 EIF3CLB5ME19 914 aaKnown RBP12.75□□□□□ -0.37
LINC00342-202ENST00000448494 ZRANB2O95218 330 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC00342-202ENST00000448494 EIF3CQ99613 913 aaKnown RBP12.75□□□□□ -0.37
LINC00342-202ENST00000448494 CCDC171Q6TFL3 1326 aa12.75□□□□□ -0.37
LINC00342-202ENST00000448494 PLB1Q6P1J6 1458 aa12.75□□□□□ -0.37
LINC00342-202ENST00000448494 ARHGEF12Q9NZN5 1544 aa12.75□□□□□ -0.37
LINC00342-202ENST00000448494 MPHOSPH10O00566 681 aaKnown RBP12.74□□□□□ -0.37
LINC00342-202ENST00000448494 RPS6KA5O75582 802 aa12.74□□□□□ -0.37
LINC00342-202ENST00000448494 CORO7P57737 925 aa12.74□□□□□ -0.37
LINC00342-202ENST00000448494 ATP1B4Q9UN42 357 aaPredicted RBP12.74□□□□□ -0.37
LINC00342-202ENST00000448494 ANKRD33BA6NCL7 494 aa12.74□□□□□ -0.37
LINC00342-202ENST00000448494 POLR3GO15318 223 aaPredicted RBP12.74□□□□□ -0.37
LINC00342-202ENST00000448494 C21orf2O43822 256 aa12.74□□□□□ -0.37
LINC00342-202ENST00000448494 CLCN6P51797 869 aa12.74□□□□□ -0.37
LINC00342-202ENST00000448494 TPD52L1Q16890 204 aaPredicted RBP12.74□□□□□ -0.37
LINC00342-202ENST00000448494 ZSCAN16Q9H4T2 348 aaPredicted RBP12.74□□□□□ -0.37
LINC00342-202ENST00000448494 ERBB3P21860 1342 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms