RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 CYP27B1O15528 508 aa17.98■□□□□ 0.47
SNHG4-201ENST00000448190 SPG7Q9UQ90 795 aa17.98■□□□□ 0.47
SNHG4-201ENST00000448190 ANKRD26Q9UPS8 1709 aa17.98■□□□□ 0.47
SNHG4-201ENST00000448190 OVOS2A0A0G2JMS6 1433 aa17.98■□□□□ 0.47
SNHG4-201ENST00000448190 TNS2Q63HR2 1409 aa17.98■□□□□ 0.47
SNHG4-201ENST00000448190 BAG6P46379 1132 aa17.97■□□□□ 0.47
SNHG4-201ENST00000448190 SYTL4Q96C24 671 aaPredicted RBP17.97■□□□□ 0.47
SNHG4-201ENST00000448190 BCL11BQ9C0K0 894 aaPredicted RBP17.97■□□□□ 0.47
SNHG4-201ENST00000448190 PRIM1P49642 420 aaKnown RBP17.96■□□□□ 0.47
SNHG4-201ENST00000448190 RALBP1Q15311 655 aa17.96■□□□□ 0.47
SNHG4-201ENST00000448190 EZH2Q15910 746 aaKnown RBP17.96■□□□□ 0.47
SNHG4-201ENST00000448190 PARD3Q8TEW0 1356 aa17.95■□□□□ 0.46
SNHG4-201ENST00000448190 PLEKHO1Q53GL0 409 aaPredicted RBP17.95■□□□□ 0.46
SNHG4-201ENST00000448190 RGPD2P0DJD1 1756 aa17.94■□□□□ 0.46
SNHG4-201ENST00000448190 LRRC37A3O60309 1634 aa17.94■□□□□ 0.46
SNHG4-201ENST00000448190 PARP4Q9UKK3 1724 aaKnown RBP17.93■□□□□ 0.46
SNHG4-201ENST00000448190 U2AF1L5P0DN76 240 aaPredicted RBP17.93■□□□□ 0.46
SNHG4-201ENST00000448190 U2AF1Q01081 240 aaKnown RBP eCLIP17.93■□□□□ 0.46
SNHG4-201ENST00000448190 NUDCQ9Y266 331 aa17.93■□□□□ 0.46
SNHG4-201ENST00000448190 PCDH11XQ9BZA7 1347 aa17.93■□□□□ 0.46
SNHG4-201ENST00000448190 PCDH11YQ9BZA8 1340 aa17.93■□□□□ 0.46
SNHG4-201ENST00000448190 FAM208AQ9UK61 1670 aaKnown RBP17.93■□□□□ 0.46
SNHG4-201ENST00000448190 NCAPD2Q15021 1401 aa17.92■□□□□ 0.46
SNHG4-201ENST00000448190 ZNF530Q6P9A1 599 aaPredicted RBP17.92■□□□□ 0.46
SNHG4-201ENST00000448190 CAMKK2Q96RR4 588 aa17.92■□□□□ 0.46
SNHG4-201ENST00000448190 PRKRIP1Q9H875 184 aaPredicted RBP17.92■□□□□ 0.46
SNHG4-201ENST00000448190 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.92■□□□□ 0.46
SNHG4-201ENST00000448190 PHKG2P15735 406 aa17.91■□□□□ 0.46
SNHG4-201ENST00000448190 IFNL2Q8IZJ0 200 aa17.91■□□□□ 0.46
SNHG4-201ENST00000448190 AMOTQ4VCS5 1084 aa17.9■□□□□ 0.46
SNHG4-201ENST00000448190 MPRIPQ6WCQ1 1025 aa17.89■□□□□ 0.45
SNHG4-201ENST00000448190 BCL9O00512 1426 aa17.89■□□□□ 0.45
SNHG4-201ENST00000448190 COL3A1P02461 1466 aaPredicted RBP17.88■□□□□ 0.45
SNHG4-201ENST00000448190 NKX1-1Q15270 411 aaPredicted RBP17.88■□□□□ 0.45
SNHG4-201ENST00000448190 MTHFSDQ2M296 383 aaKnown RBP17.88■□□□□ 0.45
SNHG4-201ENST00000448190 PROM2Q8N271 834 aa17.88■□□□□ 0.45
SNHG4-201ENST00000448190 MYBBP1AQ9BQG0 1328 aaKnown RBP17.88■□□□□ 0.45
SNHG4-201ENST00000448190 KDRP35968 1356 aa17.88■□□□□ 0.45
SNHG4-201ENST00000448190 PRKAR2BP31323 418 aa17.87■□□□□ 0.45
SNHG4-201ENST00000448190 C1orf141Q5JVX7 400 aa17.87■□□□□ 0.45
SNHG4-201ENST00000448190 PHACTR3Q96KR7 559 aa17.87■□□□□ 0.45
SNHG4-201ENST00000448190 PLSCR1O15162 318 aa17.86■□□□□ 0.45
SNHG4-201ENST00000448190 RSPH6AQ9H0K4 717 aa17.86■□□□□ 0.45
SNHG4-201ENST00000448190 KCNQ4P56696 695 aa17.85■□□□□ 0.45
SNHG4-201ENST00000448190 TXNRD1Q16881 649 aa17.84■□□□□ 0.45
SNHG4-201ENST00000448190 PIGBQ92521 554 aa17.84■□□□□ 0.45
SNHG4-201ENST00000448190 LGR6Q9HBX8 967 aa17.84■□□□□ 0.45
SNHG4-201ENST00000448190 WNK3Q9BYP7 1800 aa17.84■□□□□ 0.45
SNHG4-201ENST00000448190 FCHSD2O94868 740 aa17.83■□□□□ 0.44
SNHG4-201ENST00000448190 PSDA5PKW4 1024 aaPredicted RBP17.82■□□□□ 0.44
SNHG4-201ENST00000448190 ANP32CO43423 234 aa17.82■□□□□ 0.44
SNHG4-201ENST00000448190 CCDC184Q52MB2 194 aa17.82■□□□□ 0.44
SNHG4-201ENST00000448190 AKAP4Q5JQC9 854 aa17.82■□□□□ 0.44
SNHG4-201ENST00000448190 DCAF5Q96JK2 942 aa17.82■□□□□ 0.44
SNHG4-201ENST00000448190 HSP90AB1P08238 724 aaKnown RBP17.81■□□□□ 0.44
SNHG4-201ENST00000448190 CABP4P57796 275 aa17.81■□□□□ 0.44
SNHG4-201ENST00000448190 TMOD3Q9NYL9 352 aa17.81■□□□□ 0.44
SNHG4-201ENST00000448190 R3HDM1Q15032 1099 aaKnown RBP17.8■□□□□ 0.44
SNHG4-201ENST00000448190 NFATC2IPQ8NCF5 419 aa17.8■□□□□ 0.44
SNHG4-201ENST00000448190 ASAP1Q9ULH1 1129 aa17.8■□□□□ 0.44
SNHG4-201ENST00000448190 ERVV-2B6SEH9 535 aa17.79■□□□□ 0.44
SNHG4-201ENST00000448190 LRRC4BQ9NT99 713 aa17.79■□□□□ 0.44
SNHG4-201ENST00000448190 RNMTO43148 476 aaKnown RBP17.78■□□□□ 0.44
SNHG4-201ENST00000448190 GAS2L2Q8NHY3 880 aa17.78■□□□□ 0.44
SNHG4-201ENST00000448190 RGPD1P0DJD0 1748 aa17.78■□□□□ 0.44
SNHG4-201ENST00000448190 WDR43Q15061 677 aaKnown RBP eCLIP17.77■□□□□ 0.44
SNHG4-201ENST00000448190 NBPF14Q5TI25 921 aa17.77■□□□□ 0.44
SNHG4-201ENST00000448190 CCDC146Q8IYE0 955 aa17.77■□□□□ 0.44
SNHG4-201ENST00000448190 ATG3Q9NT62 314 aa17.77■□□□□ 0.44
SNHG4-201ENST00000448190 ADAMTS8Q9UP79 889 aa17.77■□□□□ 0.44
SNHG4-201ENST00000448190 KDM6AO15550 1401 aaPredicted RBP17.76■□□□□ 0.43
SNHG4-201ENST00000448190 GNAT3A8MTJ3 354 aa17.76■□□□□ 0.43
SNHG4-201ENST00000448190 IL17REQ8NFR9 667 aa17.76■□□□□ 0.43
SNHG4-201ENST00000448190 PLEKHF1Q96S99 279 aa17.76■□□□□ 0.43
SNHG4-201ENST00000448190 ANO8Q9HCE9 1232 aaPredicted RBP17.75■□□□□ 0.43
SNHG4-201ENST00000448190 CCNL1Q9UK58 526 aaPredicted RBP17.75■□□□□ 0.43
SNHG4-201ENST00000448190 PLEKHG2Q9H7P9 1386 aa17.75■□□□□ 0.43
SNHG4-201ENST00000448190 SHANK3Q9BYB0 1731 aa17.75■□□□□ 0.43
SNHG4-201ENST00000448190 NEFMP07197 916 aa17.74■□□□□ 0.43
SNHG4-201ENST00000448190 DCTN1Q14203 1278 aa17.74■□□□□ 0.43
SNHG4-201ENST00000448190 SMARCC1Q92922 1105 aaPredicted RBP17.74■□□□□ 0.43
SNHG4-201ENST00000448190 RBM42Q9BTD8 480 aaKnown RBP17.74■□□□□ 0.43
SNHG4-201ENST00000448190 TNS1Q9HBL0 1735 aaKnown RBP17.74■□□□□ 0.43
SNHG4-201ENST00000448190 MCM10Q7L590 875 aa17.73■□□□□ 0.43
SNHG4-201ENST00000448190 SLC52A2Q9HAB3 445 aa17.73■□□□□ 0.43
SNHG4-201ENST00000448190 SRCAPQ6ZRS2 3230 aa17.73■□□□□ 0.43
SNHG4-201ENST00000448190 PALLDQ8WX93 1383 aa17.72■□□□□ 0.43
SNHG4-201ENST00000448190 PTCD1O75127 700 aaKnown RBP17.72■□□□□ 0.43
SNHG4-201ENST00000448190 SLC39A6Q13433 755 aa17.72■□□□□ 0.43
SNHG4-201ENST00000448190 PNNQ9H307 717 aaKnown RBP17.72■□□□□ 0.43
SNHG4-201ENST00000448190 STK32BQ9NY57 414 aa17.72■□□□□ 0.43
SNHG4-201ENST00000448190 PKD1L3Q7Z443 1732 aa17.72■□□□□ 0.43
SNHG4-201ENST00000448190 MAPK8IP3Q9UPT6 1336 aa17.72■□□□□ 0.43
SNHG4-201ENST00000448190 MAP3K5Q99683 1374 aa17.71■□□□□ 0.43
SNHG4-201ENST00000448190 SENP3-EIF4A1A0A087X0R7 540 aa17.71■□□□□ 0.43
SNHG4-201ENST00000448190 NEUROD2Q15784 382 aa17.71■□□□□ 0.43
SNHG4-201ENST00000448190 SLC27A3Q5K4L6 730 aa17.71■□□□□ 0.43
SNHG4-201ENST00000448190 RTF1Q92541 710 aaKnown RBP17.71■□□□□ 0.43
SNHG4-201ENST00000448190 MRS2Q9HD23 443 aa17.71■□□□□ 0.43
SNHG4-201ENST00000448190 RRP7AQ9Y3A4 280 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms