RNA–Protein interactions for RNA: ENST00000447745.5

CTDSPL-207, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-207ENST00000447745 TNS1Q9HBL0 1735 aaKnown RBP13.77□□□□□ -0.21
CTDSPL-207ENST00000447745 NPC1L1Q9UHC9 1359 aa13.76□□□□□ -0.21
CTDSPL-207ENST00000447745 KCNQ2O43526 872 aa13.76□□□□□ -0.21
CTDSPL-207ENST00000447745 ACSBG1Q96GR2 724 aa13.76□□□□□ -0.21
CTDSPL-207ENST00000447745 SBF2Q86WG5 1849 aa13.76□□□□□ -0.21
CTDSPL-207ENST00000447745 MTHFSP49914 203 aa13.75□□□□□ -0.21
CTDSPL-207ENST00000447745 PLSCR1O15162 318 aa13.74□□□□□ -0.21
CTDSPL-207ENST00000447745 NCAPD2Q15021 1401 aa13.73□□□□□ -0.21
CTDSPL-207ENST00000447745 PARD3Q8TEW0 1356 aa13.72□□□□□ -0.21
CTDSPL-207ENST00000447745 KAT6BQ8WYB5 2073 aa13.72□□□□□ -0.21
CTDSPL-207ENST00000447745 IGSF1Q8N6C5 1336 aa13.71□□□□□ -0.21
CTDSPL-207ENST00000447745 CYP27B1O15528 508 aa13.71□□□□□ -0.21
CTDSPL-207ENST00000447745 IL13P35225 146 aa13.71□□□□□ -0.21
CTDSPL-207ENST00000447745 SPG7Q9UQ90 795 aa13.71□□□□□ -0.21
CTDSPL-207ENST00000447745 PRIM1P49642 420 aaKnown RBP13.7□□□□□ -0.22
CTDSPL-207ENST00000447745 PROM2Q8N271 834 aa13.7□□□□□ -0.22
CTDSPL-207ENST00000447745 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.7□□□□□ -0.22
CTDSPL-207ENST00000447745 PCDH11XQ9BZA7 1347 aa13.69□□□□□ -0.22
CTDSPL-207ENST00000447745 PCDH11YQ9BZA8 1340 aa13.69□□□□□ -0.22
CTDSPL-207ENST00000447745 PSDA5PKW4 1024 aaPredicted RBP13.69□□□□□ -0.22
CTDSPL-207ENST00000447745 SULT6B1Q6IMI4 303 aa13.69□□□□□ -0.22
CTDSPL-207ENST00000447745 AEBP1Q8IUX7 1158 aa13.69□□□□□ -0.22
CTDSPL-207ENST00000447745 SYTL4Q96C24 671 aaPredicted RBP13.69□□□□□ -0.22
CTDSPL-207ENST00000447745 SHANK3Q9BYB0 1731 aa13.69□□□□□ -0.22
CTDSPL-207ENST00000447745 DIAPH1O60610 1272 aaKnown RBP13.68□□□□□ -0.22
CTDSPL-207ENST00000447745 DDX10Q13206 875 aaKnown RBP13.68□□□□□ -0.22
CTDSPL-207ENST00000447745 NBPF14Q5TI25 921 aa13.68□□□□□ -0.22
CTDSPL-207ENST00000447745 NHSQ6T4R5 1651 aa13.67□□□□□ -0.22
CTDSPL-207ENST00000447745 R3HDM1Q15032 1099 aaKnown RBP13.67□□□□□ -0.22
CTDSPL-207ENST00000447745 NKX1-1Q15270 411 aaPredicted RBP13.67□□□□□ -0.22
CTDSPL-207ENST00000447745 TXNRD1Q16881 649 aa13.67□□□□□ -0.22
CTDSPL-207ENST00000447745 PLEKHO1Q53GL0 409 aaPredicted RBP13.67□□□□□ -0.22
CTDSPL-207ENST00000447745 PPP2R1AP30153 589 aa13.66□□□□□ -0.22
CTDSPL-207ENST00000447745 IFNL2Q8IZJ0 200 aa13.66□□□□□ -0.22
CTDSPL-207ENST00000447745 MSH5O43196 834 aa13.65□□□□□ -0.22
CTDSPL-207ENST00000447745 PHKG2P15735 406 aa13.65□□□□□ -0.22
CTDSPL-207ENST00000447745 PKD1L3Q7Z443 1732 aa13.64□□□□□ -0.23
CTDSPL-207ENST00000447745 RREB1Q92766 1687 aa13.64□□□□□ -0.23
CTDSPL-207ENST00000447745 KDRP35968 1356 aa13.64□□□□□ -0.23
CTDSPL-207ENST00000447745 HMOX1P09601 288 aa13.64□□□□□ -0.23
CTDSPL-207ENST00000447745 AMOTQ4VCS5 1084 aa13.64□□□□□ -0.23
CTDSPL-207ENST00000447745 MPRIPQ6WCQ1 1025 aa13.64□□□□□ -0.23
CTDSPL-207ENST00000447745 BTAF1O14981 1849 aa13.64□□□□□ -0.23
CTDSPL-207ENST00000447745 RGPD3A6NKT7 1758 aaPredicted RBP13.63□□□□□ -0.23
CTDSPL-207ENST00000447745 RGPD4Q7Z3J3 1758 aa13.63□□□□□ -0.23
CTDSPL-207ENST00000447745 PLEKHG2Q9H7P9 1386 aa13.63□□□□□ -0.23
CTDSPL-207ENST00000447745 U2SURPO15042 1029 aaKnown RBP13.63□□□□□ -0.23
CTDSPL-207ENST00000447745 ZNF530Q6P9A1 599 aaPredicted RBP13.63□□□□□ -0.23
CTDSPL-207ENST00000447745 CFAP53Q96M91 514 aa13.63□□□□□ -0.23
CTDSPL-207ENST00000447745 NUP188Q5SRE5 1749 aa13.63□□□□□ -0.23
CTDSPL-207ENST00000447745 DOT1LQ8TEK3 1739 aa13.63□□□□□ -0.23
CTDSPL-207ENST00000447745 PIGBQ92521 554 aa13.61□□□□□ -0.23
CTDSPL-207ENST00000447745 ANO8Q9HCE9 1232 aaPredicted RBP13.61□□□□□ -0.23
CTDSPL-207ENST00000447745 LRRC4BQ9NT99 713 aa13.61□□□□□ -0.23
CTDSPL-207ENST00000447745 SRCAPQ6ZRS2 3230 aa13.61□□□□□ -0.23
CTDSPL-207ENST00000447745 COL3A1P02461 1466 aaPredicted RBP13.61□□□□□ -0.23
CTDSPL-207ENST00000447745 HSP90AB1P08238 724 aaKnown RBP13.6□□□□□ -0.23
CTDSPL-207ENST00000447745 SLC27A3Q5K4L6 730 aa13.6□□□□□ -0.23
CTDSPL-207ENST00000447745 STK32BQ9NY57 414 aa13.6□□□□□ -0.23
CTDSPL-207ENST00000447745 KCNQ4P56696 695 aa13.59□□□□□ -0.23
CTDSPL-207ENST00000447745 SLC15A2Q16348 729 aa13.59□□□□□ -0.23
CTDSPL-207ENST00000447745 C1orf141Q5JVX7 400 aa13.59□□□□□ -0.23
CTDSPL-207ENST00000447745 DCAF5Q96JK2 942 aa13.59□□□□□ -0.23
CTDSPL-207ENST00000447745 TMOD3Q9NYL9 352 aa13.59□□□□□ -0.23
CTDSPL-207ENST00000447745 NUDCQ9Y266 331 aa13.59□□□□□ -0.23
CTDSPL-207ENST00000447745 ERVV-2B6SEH9 535 aa13.58□□□□□ -0.24
CTDSPL-207ENST00000447745 RALBP1Q15311 655 aa13.58□□□□□ -0.24
CTDSPL-207ENST00000447745 SMARCC1Q92922 1105 aaPredicted RBP13.58□□□□□ -0.24
CTDSPL-207ENST00000447745 TOGARAM1Q9Y4F4 1720 aa13.58□□□□□ -0.24
CTDSPL-207ENST00000447745 MTHFSDQ2M296 383 aaKnown RBP13.57□□□□□ -0.24
CTDSPL-207ENST00000447745 AKAP4Q5JQC9 854 aa13.57□□□□□ -0.24
CTDSPL-207ENST00000447745 CCNL1Q9UK58 526 aaPredicted RBP13.57□□□□□ -0.24
CTDSPL-207ENST00000447745 ITGB4P16144 1822 aa13.57□□□□□ -0.24
CTDSPL-207ENST00000447745 U2AF1L5P0DN76 240 aaPredicted RBP13.56□□□□□ -0.24
CTDSPL-207ENST00000447745 U2AF1Q01081 240 aaKnown RBP eCLIP13.56□□□□□ -0.24
CTDSPL-207ENST00000447745 ASAP1Q9ULH1 1129 aa13.56□□□□□ -0.24
CTDSPL-207ENST00000447745 PALLDQ8WX93 1383 aa13.56□□□□□ -0.24
CTDSPL-207ENST00000447745 CABP4P57796 275 aa13.55□□□□□ -0.24
CTDSPL-207ENST00000447745 ZNF827Q17R98 1081 aa13.55□□□□□ -0.24
CTDSPL-207ENST00000447745 PDGFDQ9GZP0 370 aaPredicted RBP13.55□□□□□ -0.24
CTDSPL-207ENST00000447745 ATG3Q9NT62 314 aa13.55□□□□□ -0.24
CTDSPL-207ENST00000447745 KDM6AO15550 1401 aaPredicted RBP13.55□□□□□ -0.24
CTDSPL-207ENST00000447745 LY75O60449 1722 aa13.54□□□□□ -0.24
CTDSPL-207ENST00000447745 ZNF316A6NFI3 1004 aaPredicted RBP13.54□□□□□ -0.24
CTDSPL-207ENST00000447745 NFATC2IPQ8NCF5 419 aa13.54□□□□□ -0.24
CTDSPL-207ENST00000447745 AKT1S1Q96B36 256 aa13.54□□□□□ -0.24
CTDSPL-207ENST00000447745 PHACTR3Q96KR7 559 aa13.54□□□□□ -0.24
CTDSPL-207ENST00000447745 RSPH6AQ9H0K4 717 aa13.54□□□□□ -0.24
CTDSPL-207ENST00000447745 LGR6Q9HBX8 967 aa13.54□□□□□ -0.24
CTDSPL-207ENST00000447745 FCHSD2O94868 740 aa13.53□□□□□ -0.24
CTDSPL-207ENST00000447745 PRKAR2BP31323 418 aa13.53□□□□□ -0.24
CTDSPL-207ENST00000447745 LOC102724428A0A0B4J2F2 783 aa13.52□□□□□ -0.25
CTDSPL-207ENST00000447745 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.25
CTDSPL-207ENST00000447745 SIK1P57059 783 aa13.52□□□□□ -0.25
CTDSPL-207ENST00000447745 GAS2L2Q8NHY3 880 aa13.52□□□□□ -0.25
CTDSPL-207ENST00000447745 TFCP2L1Q9NZI6 479 aa13.52□□□□□ -0.25
CTDSPL-207ENST00000447745 PAPPAQ13219 1627 aa13.52□□□□□ -0.25
CTDSPL-207ENST00000447745 HMGB2P26583 209 aaKnown RBP13.51□□□□□ -0.25
CTDSPL-207ENST00000447745 SPON1Q9HCB6 807 aa13.51□□□□□ -0.25
CTDSPL-207ENST00000447745 MYBBP1AQ9BQG0 1328 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms