RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 ZBBXA8MT70 800 aa5.76□□□□□ -1.49
PMS1-216ENST00000447734 PER1O15534 1290 aaPredicted RBP5.76□□□□□ -1.49
PMS1-216ENST00000447734 CD2BP2O95400 341 aaKnown RBP5.76□□□□□ -1.49
PMS1-216ENST00000447734 INSM1Q01101 510 aaPredicted RBP5.76□□□□□ -1.49
PMS1-216ENST00000447734 FAM69CQ0P6D2 419 aa5.76□□□□□ -1.49
PMS1-216ENST00000447734 PTK7Q13308 1070 aa5.76□□□□□ -1.49
PMS1-216ENST00000447734 BCL11AQ9H165 835 aa5.76□□□□□ -1.49
PMS1-216ENST00000447734 SLC27A5Q9Y2P5 690 aa5.76□□□□□ -1.49
PMS1-216ENST00000447734 ATP5J2-PTCD1G3V325 749 aa5.75□□□□□ -1.49
PMS1-216ENST00000447734 J3QL48 77 aa5.75□□□□□ -1.49
PMS1-216ENST00000447734 SMARCA5O60264 1052 aaPredicted RBP5.75□□□□□ -1.49
PMS1-216ENST00000447734 SWI5Q1ZZU3 235 aa5.75□□□□□ -1.49
PMS1-216ENST00000447734 RNF19BQ6ZMZ0 732 aa5.75□□□□□ -1.49
PMS1-216ENST00000447734 ANKMY2Q8IV38 441 aa5.75□□□□□ -1.49
PMS1-216ENST00000447734 UBXN4Q92575 508 aa5.75□□□□□ -1.49
PMS1-216ENST00000447734 TRIM47Q96LD4 638 aa5.75□□□□□ -1.49
PMS1-216ENST00000447734 PPP1R1BQ9UD71 204 aaPredicted RBP5.75□□□□□ -1.49
PMS1-216ENST00000447734 WNT7AO00755 349 aa5.74□□□□□ -1.49
PMS1-216ENST00000447734 ABL1P00519 1130 aa5.74□□□□□ -1.49
PMS1-216ENST00000447734 NCOA4Q13772 614 aa5.74□□□□□ -1.49
PMS1-216ENST00000447734 SF3A1Q15459 793 aaKnown RBP5.74□□□□□ -1.49
PMS1-216ENST00000447734 NAALADL2Q58DX5 795 aa5.74□□□□□ -1.49
PMS1-216ENST00000447734 BRICD5Q6PL45 260 aa5.74□□□□□ -1.49
PMS1-216ENST00000447734 FAM174AQ8TBP5 190 aa5.74□□□□□ -1.49
PMS1-216ENST00000447734 SYMPKQ92797 1274 aaKnown RBP5.74□□□□□ -1.49
PMS1-216ENST00000447734 SPATA32Q96LK8 384 aa5.74□□□□□ -1.49
PMS1-216ENST00000447734 TTC24A2A3L6 582 aaPredicted RBP5.73□□□□□ -1.49
PMS1-216ENST00000447734 RECKO95980 971 aa5.73□□□□□ -1.49
PMS1-216ENST00000447734 SCNN1AP37088 669 aa5.73□□□□□ -1.49
PMS1-216ENST00000447734 SLFNL1Q499Z3 407 aa5.73□□□□□ -1.49
PMS1-216ENST00000447734 C1orf216Q8TAB5 229 aa5.73□□□□□ -1.49
PMS1-216ENST00000447734 EGFL7Q9UHF1 273 aa5.73□□□□□ -1.49
PMS1-216ENST00000447734 H3BRB1 525 aa5.72□□□□□ -1.49
PMS1-216ENST00000447734 MAPK1P28482 360 aa5.72□□□□□ -1.49
PMS1-216ENST00000447734 ATP6V1AP38606 617 aa5.72□□□□□ -1.49
PMS1-216ENST00000447734 DPYDQ12882 1025 aa5.72□□□□□ -1.49
PMS1-216ENST00000447734 FBXO33Q7Z6M2 555 aa5.72□□□□□ -1.49
PMS1-216ENST00000447734 RETREG3Q86VR2 466 aa5.72□□□□□ -1.49
PMS1-216ENST00000447734 RNF135Q8IUD6 432 aa5.72□□□□□ -1.49
PMS1-216ENST00000447734 GLYCTKQ8IVS8 523 aa5.72□□□□□ -1.49
PMS1-216ENST00000447734 SNIP1Q8TAD8 396 aaKnown RBP5.72□□□□□ -1.49
PMS1-216ENST00000447734 HPS1Q92902 700 aa5.72□□□□□ -1.49
PMS1-216ENST00000447734 MRGPRX2Q96LB1 330 aa5.72□□□□□ -1.49
PMS1-216ENST00000447734 CHMP4AQ9BY43 222 aa5.72□□□□□ -1.49
PMS1-216ENST00000447734 TUT1Q9H6E5 874 aaKnown RBP5.72□□□□□ -1.49
PMS1-216ENST00000447734 SALL2Q9Y467 1007 aaPredicted RBP5.72□□□□□ -1.49
PMS1-216ENST00000447734 LZTS3O60299 673 aaPredicted RBP5.71□□□□□ -1.5
PMS1-216ENST00000447734 EIF5BO60841 1220 aaKnown RBP5.71□□□□□ -1.5
PMS1-216ENST00000447734 FMNL1O95466 1100 aaPredicted RBP5.71□□□□□ -1.5
PMS1-216ENST00000447734 TAGLNQ01995 201 aaKnown RBP5.71□□□□□ -1.5
PMS1-216ENST00000447734 TRIM32Q13049 653 aa5.71□□□□□ -1.5
PMS1-216ENST00000447734 ZNF211Q13398 564 aaPredicted RBP5.71□□□□□ -1.5
PMS1-216ENST00000447734 TSNAXIP1Q2TAA8 658 aa5.71□□□□□ -1.5
PMS1-216ENST00000447734 EML3Q32P44 896 aa5.71□□□□□ -1.5
PMS1-216ENST00000447734 MSS51Q4VC12 460 aa5.71□□□□□ -1.5
PMS1-216ENST00000447734 DESI1Q6ICB0 168 aa5.71□□□□□ -1.5
PMS1-216ENST00000447734 OGFOD1Q8N543 542 aa5.71□□□□□ -1.5
PMS1-216ENST00000447734 ZNF592Q92610 1267 aa5.71□□□□□ -1.5
PMS1-216ENST00000447734 FKBPLQ9UIM3 349 aa5.71□□□□□ -1.5
PMS1-216ENST00000447734 PRMT3O60678 531 aa5.7□□□□□ -1.5
PMS1-216ENST00000447734 ERCC5P28715 1186 aaPredicted RBP5.7□□□□□ -1.5
PMS1-216ENST00000447734 ZSCAN29Q8IWY8 852 aaPredicted RBP5.7□□□□□ -1.5
PMS1-216ENST00000447734 PLPP7Q8NBV4 271 aa5.7□□□□□ -1.5
PMS1-216ENST00000447734 ZNF594Q96JF6 807 aaPredicted RBP5.7□□□□□ -1.5
PMS1-216ENST00000447734 ASB16Q96NS5 453 aa5.7□□□□□ -1.5
PMS1-216ENST00000447734 ZC3H4Q9UPT8 1303 aaKnown RBP5.7□□□□□ -1.5
PMS1-216ENST00000447734 ICMTO60725 284 aa5.69□□□□□ -1.5
PMS1-216ENST00000447734 NCLP19338 710 aaKnown RBP5.69□□□□□ -1.5
PMS1-216ENST00000447734 ATP1A2P50993 1020 aa5.69□□□□□ -1.5
PMS1-216ENST00000447734 MMP16P51512 607 aa5.69□□□□□ -1.5
PMS1-216ENST00000447734 SKOR1P84550 965 aa5.69□□□□□ -1.5
PMS1-216ENST00000447734 KCNH2Q12809 1159 aa5.69□□□□□ -1.5
PMS1-216ENST00000447734 LYPD8Q6UX82 237 aa5.69□□□□□ -1.5
PMS1-216ENST00000447734 TRIM50Q86XT4 487 aa5.69□□□□□ -1.5
PMS1-216ENST00000447734 ANO2Q9NQ90 1003 aa5.69□□□□□ -1.5
PMS1-216ENST00000447734 CEP126Q9P2H0 1117 aa5.69□□□□□ -1.5
PMS1-216ENST00000447734 DCTN4Q9UJW0 460 aa5.69□□□□□ -1.5
PMS1-216ENST00000447734 C21orf2O43822 256 aa5.68□□□□□ -1.5
PMS1-216ENST00000447734 EAPPQ56P03 285 aaPredicted RBP5.68□□□□□ -1.5
PMS1-216ENST00000447734 SENP2Q9HC62 589 aa5.68□□□□□ -1.5
PMS1-216ENST00000447734 DNAAF2Q9NVR5 837 aaKnown RBP5.68□□□□□ -1.5
PMS1-216ENST00000447734 ZBTB24O43167 697 aaPredicted RBP5.67□□□□□ -1.5
PMS1-216ENST00000447734 GMPRP36959 345 aa5.67□□□□□ -1.5
PMS1-216ENST00000447734 MCCD1P59942 119 aaPredicted RBP5.67□□□□□ -1.5
PMS1-216ENST00000447734 CLDN10P78369 228 aa5.67□□□□□ -1.5
PMS1-216ENST00000447734 COL19A1Q14993 1142 aa5.67□□□□□ -1.5
PMS1-216ENST00000447734 Q3C1V9 767 aa5.67□□□□□ -1.5
PMS1-216ENST00000447734 MAP7D1Q3KQU3 841 aa5.67□□□□□ -1.5
PMS1-216ENST00000447734 TAS1R3Q7RTX0 852 aa5.67□□□□□ -1.5
PMS1-216ENST00000447734 CXXC1Q9P0U4 656 aaPredicted RBP5.67□□□□□ -1.5
PMS1-216ENST00000447734 NOD1Q9Y239 953 aa5.67□□□□□ -1.5
PMS1-216ENST00000447734 RBM19Q9Y4C8 960 aaKnown RBP5.67□□□□□ -1.5
PMS1-216ENST00000447734 PCDHB9Q9Y5E1 797 aa5.67□□□□□ -1.5
PMS1-216ENST00000447734 LARGE2Q8N3Y3 721 aa5.66□□□□□ -1.5
PMS1-216ENST00000447734 PRIMPOLQ96LW4 560 aa5.66□□□□□ -1.5
PMS1-216ENST00000447734 SCAMP3O14828 347 aaKnown RBP5.65□□□□□ -1.5
PMS1-216ENST00000447734 DXOO77932 396 aaKnown RBP5.65□□□□□ -1.5
PMS1-216ENST00000447734 VEGFBP49765 207 aa5.65□□□□□ -1.5
PMS1-216ENST00000447734 SEC13P55735 322 aa5.65□□□□□ -1.5
PMS1-216ENST00000447734 OCLNQ16625 522 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms