RNA–Protein interactions for RNA: ENST00000447246.1

LRPPRC-205, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best)

Gene LRPPRC, Length 1,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-205ENST00000447246 ERBB3P21860 1342 aa21.25■□□□□ 0.99
LRPPRC-205ENST00000447246 NSD2O96028 1365 aa21.24■□□□□ 0.99
LRPPRC-205ENST00000447246 CICQ96RK0 1608 aaPredicted RBP21.24■□□□□ 0.99
LRPPRC-205ENST00000447246 PRIM1P49642 420 aaKnown RBP21.23■□□□□ 0.99
LRPPRC-205ENST00000447246 TTC21BQ7Z4L5 1316 aa21.22■□□□□ 0.99
LRPPRC-205ENST00000447246 C5P01031 1676 aa21.2■□□□□ 0.98
LRPPRC-205ENST00000447246 ANKRD36BQ8N2N9 1353 aa21.19■□□□□ 0.98
LRPPRC-205ENST00000447246 LTN1O94822 1766 aa21.18■□□□□ 0.98
LRPPRC-205ENST00000447246 RBM46Q8TBY0 533 aaKnown RBP21.18■□□□□ 0.98
LRPPRC-205ENST00000447246 HSPA1AP0DMV8 641 aaKnown RBP21.17■□□□□ 0.98
LRPPRC-205ENST00000447246 HSPA1BP0DMV9 641 aaKnown RBP21.17■□□□□ 0.98
LRPPRC-205ENST00000447246 ANKRD24Q8TF21 1146 aa21.17■□□□□ 0.98
LRPPRC-205ENST00000447246 USP54Q70EL1 1684 aa21.17■□□□□ 0.98
LRPPRC-205ENST00000447246 CENPJQ9HC77 1338 aaPredicted RBP21.16■□□□□ 0.98
LRPPRC-205ENST00000447246 NBPF1Q3BBV0 1214 aa21.14■□□□□ 0.97
LRPPRC-205ENST00000447246 SMIM5Q71RC9 77 aa21.14■□□□□ 0.97
LRPPRC-205ENST00000447246 C16orf71Q8IYS4 520 aaPredicted RBP21.14■□□□□ 0.97
LRPPRC-205ENST00000447246 TOGARAM1Q9Y4F4 1720 aa21.13■□□□□ 0.97
LRPPRC-205ENST00000447246 AMIGO3Q86WK7 504 aa21.12■□□□□ 0.97
LRPPRC-205ENST00000447246 KIAA1210Q9ULL0 1709 aa21.12■□□□□ 0.97
LRPPRC-205ENST00000447246 USP47Q96K76 1375 aa21.11■□□□□ 0.97
LRPPRC-205ENST00000447246 TAF1LQ8IZX4 1826 aa21.11■□□□□ 0.97
LRPPRC-205ENST00000447246 TTC21AQ8NDW8 1320 aa21.11■□□□□ 0.97
LRPPRC-205ENST00000447246 FSTL1Q12841 308 aa21.1■□□□□ 0.97
LRPPRC-205ENST00000447246 STAC3Q96MF2 364 aa21.1■□□□□ 0.97
LRPPRC-205ENST00000447246 PHF14O94880 888 aa21.09■□□□□ 0.97
LRPPRC-205ENST00000447246 N4BP2Q86UW6 1770 aaPredicted RBP21.09■□□□□ 0.97
LRPPRC-205ENST00000447246 KIAA1551Q9HCM1 1747 aa21.09■□□□□ 0.97
LRPPRC-205ENST00000447246 KCPQ6ZWJ8 1503 aa21.08■□□□□ 0.96
LRPPRC-205ENST00000447246 PXDNLA1KZ92 1463 aa21.07■□□□□ 0.96
LRPPRC-205ENST00000447246 ARHGAP27Q6ZUM4 889 aa21.07■□□□□ 0.96
LRPPRC-205ENST00000447246 FLAD1Q8NFF5 587 aa21.07■□□□□ 0.96
LRPPRC-205ENST00000447246 LTV1Q96GA3 475 aaPredicted RBP21.07■□□□□ 0.96
LRPPRC-205ENST00000447246 BCS1LQ9Y276 419 aa21.07■□□□□ 0.96
LRPPRC-205ENST00000447246 C4BP0C0L5 1744 aa21.07■□□□□ 0.96
LRPPRC-205ENST00000447246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.06■□□□□ 0.967e-8■■■■□ 19.5
LRPPRC-205ENST00000447246 UBR3Q6ZT12 1888 aa21.05■□□□□ 0.96
LRPPRC-205ENST00000447246 KTN1Q86UP2 1357 aaKnown RBP21.05■□□□□ 0.96
LRPPRC-205ENST00000447246 PKD1L3Q7Z443 1732 aa21.04■□□□□ 0.96
LRPPRC-205ENST00000447246 ZNF692Q9BU19 519 aaPredicted RBP21.04■□□□□ 0.96
LRPPRC-205ENST00000447246 MON2Q7Z3U7 1717 aa21.04■□□□□ 0.96
LRPPRC-205ENST00000447246 NME9Q86XW9 330 aa21.03■□□□□ 0.96
LRPPRC-205ENST00000447246 AK7Q96M32 723 aa21.03■□□□□ 0.96
LRPPRC-205ENST00000447246 FAM208AQ9UK61 1670 aaKnown RBP21.02■□□□□ 0.96
LRPPRC-205ENST00000447246 C9orf131Q5VYM1 1079 aa21.02■□□□□ 0.96
LRPPRC-205ENST00000447246 MEGF6O75095 1541 aa21.02■□□□□ 0.96
LRPPRC-205ENST00000447246 PALLDQ8WX93 1383 aa21.01■□□□□ 0.95
LRPPRC-205ENST00000447246 RGPD2P0DJD1 1756 aa21.01■□□□□ 0.95
LRPPRC-205ENST00000447246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.01■□□□□ 0.95
LRPPRC-205ENST00000447246 RRAGCQ9HB90 399 aa21.01■□□□□ 0.95
LRPPRC-205ENST00000447246 KIF13BQ9NQT8 1826 aa21■□□□□ 0.95
LRPPRC-205ENST00000447246 A0A0G2JLW4 131 aa21■□□□□ 0.95
LRPPRC-205ENST00000447246 ZCRB1Q8TBF4 217 aaKnown RBP21■□□□□ 0.95
LRPPRC-205ENST00000447246 EVC2Q86UK5 1308 aa21■□□□□ 0.95
LRPPRC-205ENST00000447246 USP31Q70CQ4 1352 aa20.99■□□□□ 0.95
LRPPRC-205ENST00000447246 PLEKHG2Q9H7P9 1386 aa20.99■□□□□ 0.95
LRPPRC-205ENST00000447246 TNRC6CQ9HCJ0 1690 aaKnown RBP20.99■□□□□ 0.95
LRPPRC-205ENST00000447246 RAB3GAP2Q9H2M9 1393 aa20.97■□□□□ 0.95
LRPPRC-205ENST00000447246 FCHSD2O94868 740 aa20.97■□□□□ 0.95
LRPPRC-205ENST00000447246 SMC1BQ8NDV3 1235 aa20.97■□□□□ 0.95
LRPPRC-205ENST00000447246 PCDH10Q9P2E7 1040 aa20.96■□□□□ 0.95
LRPPRC-205ENST00000447246 KDM2BQ8NHM5 1336 aa20.96■□□□□ 0.95
LRPPRC-205ENST00000447246 C10orf71Q711Q0 1435 aa20.95■□□□□ 0.95
LRPPRC-205ENST00000447246 MMP10P09238 476 aa20.95■□□□□ 0.94
LRPPRC-205ENST00000447246 FAM161AQ3B820 660 aa20.95■□□□□ 0.94
LRPPRC-205ENST00000447246 BRCA1P38398 1863 aaKnown RBP20.94■□□□□ 0.94
LRPPRC-205ENST00000447246 DPEP1P16444 411 aa20.93■□□□□ 0.94
LRPPRC-205ENST00000447246 RNF181Q9P0P0 153 aa20.93■□□□□ 0.94
LRPPRC-205ENST00000447246 MPRIPQ6WCQ1 1025 aa20.92■□□□□ 0.94
LRPPRC-205ENST00000447246 IP6K1Q92551 441 aa20.92■□□□□ 0.94
LRPPRC-205ENST00000447246 NSD3Q9BZ95 1437 aa20.91■□□□□ 0.94
LRPPRC-205ENST00000447246 SBNO2Q9Y2G9 1366 aa20.91■□□□□ 0.94
LRPPRC-205ENST00000447246 ARFGEF1Q9Y6D6 1849 aa20.9■□□□□ 0.94
LRPPRC-205ENST00000447246 SSFA2P28290 1259 aa20.9■□□□□ 0.94
LRPPRC-205ENST00000447246 TGFB2P61812 414 aa20.9■□□□□ 0.94
LRPPRC-205ENST00000447246 USHBP1Q8N6Y0 703 aa20.89■□□□□ 0.93
LRPPRC-205ENST00000447246 LINC00116Q8NCU8 138 aa20.89■□□□□ 0.93
LRPPRC-205ENST00000447246 CD163L1Q9NR16 1453 aa20.88■□□□□ 0.93
LRPPRC-205ENST00000447246 ITGB4P16144 1822 aa20.88■□□□□ 0.93
LRPPRC-205ENST00000447246 GNPATO15228 680 aa20.87■□□□□ 0.93
LRPPRC-205ENST00000447246 FOXN1O15353 648 aa20.87■□□□□ 0.93
LRPPRC-205ENST00000447246 MAP2P11137 1827 aaKnown RBP20.85■□□□□ 0.93
LRPPRC-205ENST00000447246 MKRN1Q9UHC7 482 aaKnown RBP20.85■□□□□ 0.93
LRPPRC-205ENST00000447246 SBF1O95248 1867 aa20.84■□□□□ 0.93
LRPPRC-205ENST00000447246 C4AP0C0L4 1744 aa20.84■□□□□ 0.93
LRPPRC-205ENST00000447246 FBLN1P23142 703 aa20.83■□□□□ 0.93
LRPPRC-205ENST00000447246 HMGB2P26583 209 aaKnown RBP20.83■□□□□ 0.93
LRPPRC-205ENST00000447246 HOXC9P31274 260 aa20.83■□□□□ 0.93
LRPPRC-205ENST00000447246 ADRA2BP18089 450 aa20.82■□□□□ 0.92
LRPPRC-205ENST00000447246 KCNA3P22001 575 aa20.82■□□□□ 0.92
LRPPRC-205ENST00000447246 SMARCC1Q92922 1105 aaPredicted RBP20.82■□□□□ 0.92
LRPPRC-205ENST00000447246 MAP3K19Q56UN5 1328 aa20.81■□□□□ 0.92
LRPPRC-205ENST00000447246 NBPF6Q5VWK0 638 aa20.81■□□□□ 0.92
LRPPRC-205ENST00000447246 DCAF5Q96JK2 942 aa20.81■□□□□ 0.92
LRPPRC-205ENST00000447246 NBPF4Q96M43 638 aa20.81■□□□□ 0.92
LRPPRC-205ENST00000447246 CCDC87Q9NVE4 849 aa20.81■□□□□ 0.92
LRPPRC-205ENST00000447246 ITPK1Q13572 414 aa20.8■□□□□ 0.92
LRPPRC-205ENST00000447246 EDC4Q6P2E9 1401 aaKnown RBP20.79■□□□□ 0.92
LRPPRC-205ENST00000447246 LOC102724428A0A0B4J2F2 783 aa20.79■□□□□ 0.92
LRPPRC-205ENST00000447246 AMPHP49418 695 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms