RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 ZCRB1Q8TBF4 217 aaKnown RBP29.59■■■□□ 2.33
APOE-204ENST00000446996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.57■■■□□ 2.32
APOE-204ENST00000446996 KDRP35968 1356 aa29.56■■■□□ 2.32
APOE-204ENST00000446996 FAM182BQ5T319 152 aa29.55■■■□□ 2.32
APOE-204ENST00000446996 PRKRIP1Q9H875 184 aaPredicted RBP29.54■■■□□ 2.32
APOE-204ENST00000446996 PKD1L3Q7Z443 1732 aa29.54■■■□□ 2.32
APOE-204ENST00000446996 SHANK3Q9BYB0 1731 aa29.53■■■□□ 2.32
APOE-204ENST00000446996 MYBBP1AQ9BQG0 1328 aaKnown RBP29.52■■■□□ 2.32
APOE-204ENST00000446996 NUDCQ9Y266 331 aa29.52■■■□□ 2.32
APOE-204ENST00000446996 SBF2Q86WG5 1849 aa29.52■■■□□ 2.32
APOE-204ENST00000446996 SULT6B1Q6IMI4 303 aa29.51■■■□□ 2.31
APOE-204ENST00000446996 SPG7Q9UQ90 795 aa29.51■■■□□ 2.31
APOE-204ENST00000446996 PCDH11XQ9BZA7 1347 aa29.49■■■□□ 2.31
APOE-204ENST00000446996 PCDH11YQ9BZA8 1340 aa29.49■■■□□ 2.31
APOE-204ENST00000446996 SF3B2Q13435 895 aaKnown RBP29.48■■■□□ 2.31
APOE-204ENST00000446996 DDX54Q8TDD1 881 aaKnown RBP29.48■■■□□ 2.31
APOE-204ENST00000446996 AMOTQ4VCS5 1084 aa29.47■■■□□ 2.31
APOE-204ENST00000446996 AEBP1Q8IUX7 1158 aa29.47■■■□□ 2.31
APOE-204ENST00000446996 PLEKHO1Q53GL0 409 aaPredicted RBP29.46■■■□□ 2.31
APOE-204ENST00000446996 U2SURPO15042 1029 aaKnown RBP29.44■■■□□ 2.3
APOE-204ENST00000446996 TRIM37O94972 964 aa29.43■■■□□ 2.3
APOE-204ENST00000446996 TNS1Q9HBL0 1735 aaKnown RBP29.42■■■□□ 2.3
APOE-204ENST00000446996 CYP27B1O15528 508 aa29.42■■■□□ 2.3
APOE-204ENST00000446996 NKX1-1Q15270 411 aaPredicted RBP29.42■■■□□ 2.3
APOE-204ENST00000446996 BCL11BQ9C0K0 894 aaPredicted RBP29.42■■■□□ 2.3
APOE-204ENST00000446996 KAT6BQ8WYB5 2073 aa29.41■■■□□ 2.3
APOE-204ENST00000446996 HMOX1P09601 288 aa29.41■■■□□ 2.3
APOE-204ENST00000446996 IFNL2Q8IZJ0 200 aa29.41■■■□□ 2.3
APOE-204ENST00000446996 BAG6P46379 1132 aa29.4■■■□□ 2.3
APOE-204ENST00000446996 NHSQ6T4R5 1651 aa29.39■■■□□ 2.3
APOE-204ENST00000446996 FCHSD2O94868 740 aa29.38■■■□□ 2.29
APOE-204ENST00000446996 ANP32CO43423 234 aa29.37■■■□□ 2.29
APOE-204ENST00000446996 PHKG2P15735 406 aa29.37■■■□□ 2.29
APOE-204ENST00000446996 U2AF1L5P0DN76 240 aaPredicted RBP29.36■■■□□ 2.29
APOE-204ENST00000446996 U2AF1Q01081 240 aaKnown RBP eCLIP29.36■■■□□ 2.29
APOE-204ENST00000446996 HSP90AB1P08238 724 aaKnown RBP29.35■■■□□ 2.29
APOE-204ENST00000446996 APBA3O96018 575 aa29.34■■■□□ 2.29
APOE-204ENST00000446996 RSPH6AQ9H0K4 717 aa29.34■■■□□ 2.29
APOE-204ENST00000446996 PLSCR1O15162 318 aa29.33■■■□□ 2.29
APOE-204ENST00000446996 ZNF530Q6P9A1 599 aaPredicted RBP29.33■■■□□ 2.29
APOE-204ENST00000446996 DOT1LQ8TEK3 1739 aa29.32■■■□□ 2.28
APOE-204ENST00000446996 ACSBG1Q96GR2 724 aa29.32■■■□□ 2.28
APOE-204ENST00000446996 KCNQ2O43526 872 aa29.31■■■□□ 2.28
APOE-204ENST00000446996 PNNQ9H307 717 aaKnown RBP29.31■■■□□ 2.28
APOE-204ENST00000446996 RGPD3A6NKT7 1758 aaPredicted RBP29.31■■■□□ 2.28
APOE-204ENST00000446996 RGPD4Q7Z3J3 1758 aa29.31■■■□□ 2.28
APOE-204ENST00000446996 C1orf141Q5JVX7 400 aa29.3■■■□□ 2.28
APOE-204ENST00000446996 DEFB132Q7Z7B7 95 aa29.3■■■□□ 2.28
APOE-204ENST00000446996 SRCAPQ6ZRS2 3230 aa29.3■■■□□ 2.28
APOE-204ENST00000446996 PRKAR2BP31323 418 aa29.29■■■□□ 2.28
APOE-204ENST00000446996 AKAP4Q5JQC9 854 aa29.29■■■□□ 2.28
APOE-204ENST00000446996 DCAF5Q96JK2 942 aa29.29■■■□□ 2.28
APOE-204ENST00000446996 PRIM1P49642 420 aaKnown RBP29.28■■■□□ 2.28
APOE-204ENST00000446996 GAS2L2Q8NHY3 880 aa29.28■■■□□ 2.28
APOE-204ENST00000446996 CAMKK2Q96RR4 588 aa29.28■■■□□ 2.28
APOE-204ENST00000446996 BTAF1O14981 1849 aa29.27■■■□□ 2.28
APOE-204ENST00000446996 MTHFSDQ2M296 383 aaKnown RBP29.27■■■□□ 2.28
APOE-204ENST00000446996 PTF1AQ7RTS3 328 aa29.27■■■□□ 2.28
APOE-204ENST00000446996 ITGB4P16144 1822 aa29.27■■■□□ 2.28
APOE-204ENST00000446996 EN1Q05925 392 aaPredicted RBP29.26■■■□□ 2.27
APOE-204ENST00000446996 TOGARAM1Q9Y4F4 1720 aa29.25■■■□□ 2.27
APOE-204ENST00000446996 ERVV-2B6SEH9 535 aa29.25■■■□□ 2.27
APOE-204ENST00000446996 SYTL4Q96C24 671 aaPredicted RBP29.23■■■□□ 2.27
APOE-204ENST00000446996 NEFMP07197 916 aa29.22■■■□□ 2.27
APOE-204ENST00000446996 PHACTR3Q96KR7 559 aa29.22■■■□□ 2.27
APOE-204ENST00000446996 SCN11AQ9UI33 1791 aa29.21■■■□□ 2.27
APOE-204ENST00000446996 EZH2Q15910 746 aaKnown RBP29.21■■■□□ 2.27
APOE-204ENST00000446996 PLEKHF1Q96S99 279 aa29.21■■■□□ 2.27
APOE-204ENST00000446996 WDR43Q15061 677 aaKnown RBP eCLIP29.2■■■□□ 2.26
APOE-204ENST00000446996 KDM6AO15550 1401 aaPredicted RBP29.2■■■□□ 2.26
APOE-204ENST00000446996 RREB1Q92766 1687 aa29.19■■■□□ 2.26
APOE-204ENST00000446996 ADAMTS7Q9UKP4 1686 aa29.18■■■□□ 2.26
APOE-204ENST00000446996 VIRMAQ69YN4 1812 aaKnown RBP29.18■■■□□ 2.26
APOE-204ENST00000446996 MPRIPQ6WCQ1 1025 aa29.18■■■□□ 2.26
APOE-204ENST00000446996 TMOD3Q9NYL9 352 aa29.18■■■□□ 2.26
APOE-204ENST00000446996 GNAT3A8MTJ3 354 aa29.17■■■□□ 2.26
APOE-204ENST00000446996 MAP3K5Q99683 1374 aa29.16■■■□□ 2.26
APOE-204ENST00000446996 PIGBQ92521 554 aa29.16■■■□□ 2.26
APOE-204ENST00000446996 RNMTO43148 476 aaKnown RBP29.15■■■□□ 2.26
APOE-204ENST00000446996 HTATSF1O43719 755 aaKnown RBP29.15■■■□□ 2.26
APOE-204ENST00000446996 SMARCC1Q92922 1105 aaPredicted RBP29.15■■■□□ 2.26
APOE-204ENST00000446996 TXNRD1Q16881 649 aa29.14■■■□□ 2.26
APOE-204ENST00000446996 PROM2Q8N271 834 aa29.14■■■□□ 2.26
APOE-204ENST00000446996 LY75O60449 1722 aa29.14■■■□□ 2.25
APOE-204ENST00000446996 HMGB2P26583 209 aaKnown RBP29.13■■■□□ 2.25
APOE-204ENST00000446996 CABP4P57796 275 aa29.13■■■□□ 2.25
APOE-204ENST00000446996 ADAMTS8Q9UP79 889 aa29.13■■■□□ 2.25
APOE-204ENST00000446996 MAPK8IP3Q9UPT6 1336 aa29.13■■■□□ 2.25
APOE-204ENST00000446996 LGR6Q9HBX8 967 aa29.12■■■□□ 2.25
APOE-204ENST00000446996 SLC27A3Q5K4L6 730 aa29.11■■■□□ 2.25
APOE-204ENST00000446996 NUP188Q5SRE5 1749 aa29.11■■■□□ 2.25
APOE-204ENST00000446996 MRC1P22897 1456 aa29.1■■■□□ 2.25
APOE-204ENST00000446996 CCDC184Q52MB2 194 aa29.1■■■□□ 2.25
APOE-204ENST00000446996 SLC52A2Q9HAB3 445 aa29.1■■■□□ 2.25
APOE-204ENST00000446996 MRS2Q9HD23 443 aa29.1■■■□□ 2.25
APOE-204ENST00000446996 NFE2L2Q16236 605 aa29.09■■■□□ 2.25
APOE-204ENST00000446996 RUNDC1Q96C34 613 aa29.09■■■□□ 2.25
APOE-204ENST00000446996 NFATC2IPQ8NCF5 419 aa29.08■■■□□ 2.25
APOE-204ENST00000446996 IL17REQ8NFR9 667 aa29.08■■■□□ 2.25
APOE-204ENST00000446996 CEMIPQ8WUJ3 1361 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms