RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 ME1P48163 572 aa9.54□□□□□ -0.88
RIF1-205ENST00000444746 ANKRD30BQ9BXX2 1392 aa9.54□□□□□ -0.88
RIF1-205ENST00000444746 NOS1P29475 1434 aa9.54□□□□□ -0.88
RIF1-205ENST00000444746 FCHSD2O94868 740 aa9.54□□□□□ -0.88
RIF1-205ENST00000444746 DHX8Q14562 1220 aaKnown RBP9.54□□□□□ -0.88
RIF1-205ENST00000444746 ZNF608Q9ULD9 1512 aaPredicted RBP9.53□□□□□ -0.88
RIF1-205ENST00000444746 SLC39A6Q13433 755 aa9.53□□□□□ -0.88
RIF1-205ENST00000444746 AEBP1Q8IUX7 1158 aa9.53□□□□□ -0.88
RIF1-205ENST00000444746 CAMSAP2Q08AD1 1489 aa9.53□□□□□ -0.88
RIF1-205ENST00000444746 RABEP1Q15276 862 aa9.53□□□□□ -0.88
RIF1-205ENST00000444746 ZFYVE27Q5T4F4 411 aa9.53□□□□□ -0.88
RIF1-205ENST00000444746 OLFM4Q6UX06 510 aa9.53□□□□□ -0.88
RIF1-205ENST00000444746 ZSCAN29Q8IWY8 852 aaPredicted RBP9.53□□□□□ -0.88
RIF1-205ENST00000444746 USP5P45974 858 aa9.53□□□□□ -0.88
RIF1-205ENST00000444746 CCDC61Q9Y6R9 512 aa9.53□□□□□ -0.88
RIF1-205ENST00000444746 CCDC69A6NI79 296 aa9.53□□□□□ -0.88
RIF1-205ENST00000444746 TRIM27P14373 513 aa9.53□□□□□ -0.88
RIF1-205ENST00000444746 MRE11P49959 708 aa9.53□□□□□ -0.88
RIF1-205ENST00000444746 MINDY4BA8MYZ0 360 aa9.52□□□□□ -0.88
RIF1-205ENST00000444746 CCDC47Q96A33 483 aaKnown RBP9.52□□□□□ -0.88
RIF1-205ENST00000444746 RSPH6AQ9H0K4 717 aa9.52□□□□□ -0.88
RIF1-205ENST00000444746 TDO2P48775 406 aa9.52□□□□□ -0.88
RIF1-205ENST00000444746 LRRC59Q96AG4 307 aaKnown RBP9.52□□□□□ -0.88
RIF1-205ENST00000444746 ACSBG1Q96GR2 724 aa9.52□□□□□ -0.88
RIF1-205ENST00000444746 PTPRKQ15262 1439 aa9.52□□□□□ -0.88
RIF1-205ENST00000444746 SYCE3A1L190 88 aa9.52□□□□□ -0.89
RIF1-205ENST00000444746 SSBP05455 408 aaKnown RBP eCLIP9.52□□□□□ -0.89
RIF1-205ENST00000444746 CCT2P78371 535 aaKnown RBP9.52□□□□□ -0.89
RIF1-205ENST00000444746 TCEANC2Q96MN5 208 aa9.52□□□□□ -0.89
RIF1-205ENST00000444746 MNS1Q8NEH6 495 aa9.52□□□□□ -0.89
RIF1-205ENST00000444746 MBIPQ9NS73 344 aa9.52□□□□□ -0.89
RIF1-205ENST00000444746 RBM27Q9P2N5 1060 aaKnown RBP9.52□□□□□ -0.89
RIF1-205ENST00000444746 PLEKHH2Q8IVE3 1493 aa9.52□□□□□ -0.89
RIF1-205ENST00000444746 TOP2BQ02880 1626 aa9.52□□□□□ -0.89
RIF1-205ENST00000444746 METTL24Q5JXM2 366 aa9.52□□□□□ -0.89
RIF1-205ENST00000444746 SLC52A1Q9NWF4 448 aa9.52□□□□□ -0.89
RIF1-205ENST00000444746 HSP90AB2PQ58FF8 381 aa9.52□□□□□ -0.89
RIF1-205ENST00000444746 LRP2BPQ9P2M1 347 aa9.52□□□□□ -0.89
RIF1-205ENST00000444746 HAND2P61296 217 aa9.52□□□□□ -0.89
RIF1-205ENST00000444746 ISM2Q6H9L7 571 aa9.52□□□□□ -0.89
RIF1-205ENST00000444746 IQSEC3Q9UPP2 1182 aaPredicted RBP9.52□□□□□ -0.89
RIF1-205ENST00000444746 TNMDQ9H2S6 317 aa9.51□□□□□ -0.89
RIF1-205ENST00000444746 CHMP4BP1P59074 171 aa9.51□□□□□ -0.89
RIF1-205ENST00000444746 HSP90AB3PQ58FF7 597 aa9.51□□□□□ -0.89
RIF1-205ENST00000444746 CD109Q6YHK3 1445 aa9.51□□□□□ -0.89
RIF1-205ENST00000444746 MX1P20591 662 aa9.51□□□□□ -0.89
RIF1-205ENST00000444746 TMEM132AQ24JP5 1023 aa9.51□□□□□ -0.89
RIF1-205ENST00000444746 BLOC1S2Q6QNY1 142 aa9.51□□□□□ -0.89
RIF1-205ENST00000444746 PHF8Q9UPP1 1060 aa9.51□□□□□ -0.89
RIF1-205ENST00000444746 KINO60870 393 aaKnown RBP9.51□□□□□ -0.89
RIF1-205ENST00000444746 LRRC2Q9BYS8 371 aa9.51□□□□□ -0.89
RIF1-205ENST00000444746 MAP3K2Q9Y2U5 619 aa9.51□□□□□ -0.89
RIF1-205ENST00000444746 KRT18P05783 430 aaKnown RBP9.5□□□□□ -0.89
RIF1-205ENST00000444746 GRPEL1Q9HAV7 217 aa9.5□□□□□ -0.89
RIF1-205ENST00000444746 WASLO00401 505 aaPredicted RBP9.5□□□□□ -0.89
RIF1-205ENST00000444746 MPHOSPH10O00566 681 aaKnown RBP9.5□□□□□ -0.89
RIF1-205ENST00000444746 CEP126Q9P2H0 1117 aa9.5□□□□□ -0.89
RIF1-205ENST00000444746 SERPINC1P01008 464 aa9.5□□□□□ -0.89
RIF1-205ENST00000444746 ERC1Q8IUD2 1116 aa9.5□□□□□ -0.89
RIF1-205ENST00000444746 ANKRD20A12PQ8NF67 263 aa9.5□□□□□ -0.89
RIF1-205ENST00000444746 BRMS1Q9HCU9 246 aa9.5□□□□□ -0.89
RIF1-205ENST00000444746 ECM2O94769 699 aaPredicted RBP9.5□□□□□ -0.89
RIF1-205ENST00000444746 TFIP11Q9UBB9 837 aaKnown RBP9.5□□□□□ -0.89
RIF1-205ENST00000444746 MAGI1Q96QZ7 1491 aaPredicted RBP9.5□□□□□ -0.89
RIF1-205ENST00000444746 IPO7O95373 1038 aaKnown RBP9.5□□□□□ -0.89
RIF1-205ENST00000444746 FILIP1Q7Z7B0 1213 aa9.5□□□□□ -0.89
RIF1-205ENST00000444746 PANK2Q9BZ23 570 aa9.5□□□□□ -0.89
RIF1-205ENST00000444746 CCDC39Q9UFE4 941 aa9.5□□□□□ -0.89
RIF1-205ENST00000444746 SART3Q15020 963 aaKnown RBP9.49□□□□□ -0.89
RIF1-205ENST00000444746 CAGE1Q8TC20 777 aa9.49□□□□□ -0.89
RIF1-205ENST00000444746 SPATA32Q96LK8 384 aa9.49□□□□□ -0.89
RIF1-205ENST00000444746 STAC3Q96MF2 364 aa9.49□□□□□ -0.89
RIF1-205ENST00000444746 ACEP12821 1306 aa9.49□□□□□ -0.89
RIF1-205ENST00000444746 EPS15P42566 896 aa9.49□□□□□ -0.89
RIF1-205ENST00000444746 CDK5RAP3Q96JB5 506 aa9.49□□□□□ -0.89
RIF1-205ENST00000444746 MCM4P33991 863 aa9.49□□□□□ -0.89
RIF1-205ENST00000444746 TANGO6Q9C0B7 1094 aa9.49□□□□□ -0.89
RIF1-205ENST00000444746 KRT28Q7Z3Y7 464 aa9.49□□□□□ -0.89
RIF1-205ENST00000444746 HOOK1Q9UJC3 728 aaKnown RBP9.49□□□□□ -0.89
RIF1-205ENST00000444746 TSPYL6Q8N831 410 aa9.49□□□□□ -0.89
RIF1-205ENST00000444746 TMOD3Q9NYL9 352 aa9.49□□□□□ -0.89
RIF1-205ENST00000444746 TBC1D2Q9BYX2 928 aa9.48□□□□□ -0.89
RIF1-205ENST00000444746 C8orf58Q8NAV2 365 aa9.48□□□□□ -0.89
RIF1-205ENST00000444746 HECW1Q76N89 1606 aa9.48□□□□□ -0.89
RIF1-205ENST00000444746 CKAP2LQ8IYA6 745 aa9.48□□□□□ -0.89
RIF1-205ENST00000444746 NECAB1Q8N987 351 aa9.48□□□□□ -0.89
RIF1-205ENST00000444746 PA2G4Q9UQ80 394 aaKnown RBP9.48□□□□□ -0.89
RIF1-205ENST00000444746 IFIT1P09914 478 aaKnown RBP9.48□□□□□ -0.89
RIF1-205ENST00000444746 CNKSR2Q8WXI2 1034 aa9.48□□□□□ -0.89
RIF1-205ENST00000444746 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.48□□□□□ -0.898e-7■■■□□ 17.6
RIF1-205ENST00000444746 TRMT112Q9UI30 125 aaKnown RBP9.48□□□□□ -0.89
RIF1-205ENST00000444746 OFD1O75665 1012 aa9.47□□□□□ -0.89
RIF1-205ENST00000444746 CT47A1Q5JQC4 288 aaPredicted RBP9.47□□□□□ -0.89
RIF1-205ENST00000444746 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
RIF1-205ENST00000444746 MEIS3Q99687 375 aa9.47□□□□□ -0.89
RIF1-205ENST00000444746 A0A087WZG4 1122 aa9.47□□□□□ -0.89
RIF1-205ENST00000444746 XBP1P17861 261 aa9.47□□□□□ -0.89
RIF1-205ENST00000444746 AIDAQ96BJ3 306 aa9.47□□□□□ -0.89
RIF1-205ENST00000444746 PI4KAP2A4QPH2 592 aa9.47□□□□□ -0.89
RIF1-205ENST00000444746 PI4KAP1Q8N8J0 262 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms