RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 LTKP29376 864 aa23.47■■□□□ 1.35
PMPCB-204ENST00000444457 TWISTNBQ3B726 338 aaPredicted RBP23.47■■□□□ 1.35
PMPCB-204ENST00000444457 PRDM4Q9UKN5 801 aa23.47■■□□□ 1.35
PMPCB-204ENST00000444457 ELL2O00472 640 aaPredicted RBP23.46■■□□□ 1.35
PMPCB-204ENST00000444457 NUCB1Q02818 461 aa23.46■■□□□ 1.35
PMPCB-204ENST00000444457 ACEP12821 1306 aa23.46■■□□□ 1.35
PMPCB-204ENST00000444457 FAM83GA6ND36 823 aa23.45■■□□□ 1.35
PMPCB-204ENST00000444457 ZBTB7BO15156 539 aaPredicted RBP23.45■■□□□ 1.35
PMPCB-204ENST00000444457 NASPP49321 788 aaPredicted RBP23.45■■□□□ 1.34
PMPCB-204ENST00000444457 CHMP4BQ9H444 224 aaKnown RBP23.45■■□□□ 1.34
PMPCB-204ENST00000444457 ABCC4O15439 1325 aa23.45■■□□□ 1.34
PMPCB-204ENST00000444457 PLEKHG3A1L390 1219 aa23.44■■□□□ 1.34
PMPCB-204ENST00000444457 EIF4A2Q14240 407 aaKnown RBP23.44■■□□□ 1.34
PMPCB-204ENST00000444457 USP6P35125 1406 aa23.44■■□□□ 1.34
PMPCB-204ENST00000444457 MAP7D2Q96T17 732 aa23.44■■□□□ 1.34
PMPCB-204ENST00000444457 C8orf58Q8NAV2 365 aa23.43■■□□□ 1.34
PMPCB-204ENST00000444457 PEAK1Q9H792 1746 aa23.43■■□□□ 1.34
PMPCB-204ENST00000444457 PTPRUQ92729 1446 aa23.43■■□□□ 1.34
PMPCB-204ENST00000444457 DCTN1Q14203 1278 aa23.42■■□□□ 1.34
PMPCB-204ENST00000444457 MSNP26038 577 aaKnown RBP23.42■■□□□ 1.34
PMPCB-204ENST00000444457 AEBP1Q8IUX7 1158 aa23.42■■□□□ 1.34
PMPCB-204ENST00000444457 NUTM2FA1L443 756 aa23.41■■□□□ 1.34
PMPCB-204ENST00000444457 HSP90AB1P08238 724 aaKnown RBP23.41■■□□□ 1.34
PMPCB-204ENST00000444457 LNPKQ9C0E8 428 aa23.41■■□□□ 1.34
PMPCB-204ENST00000444457 RGPD1P0DJD0 1748 aa23.41■■□□□ 1.34
PMPCB-204ENST00000444457 SULT6B1Q6IMI4 303 aa23.41■■□□□ 1.34
PMPCB-204ENST00000444457 CHD1LQ86WJ1 897 aa23.41■■□□□ 1.34
PMPCB-204ENST00000444457 PLPPR3Q6T4P5 718 aa23.4■■□□□ 1.34
PMPCB-204ENST00000444457 ANP32BQ92688 251 aaKnown RBP23.4■■□□□ 1.34
PMPCB-204ENST00000444457 HS1BP3Q53T59 392 aa23.39■■□□□ 1.33
PMPCB-204ENST00000444457 CLEC17AQ6ZS10 378 aa23.39■■□□□ 1.33
PMPCB-204ENST00000444457 C1orf115Q9H7X2 142 aa23.39■■□□□ 1.33
PMPCB-204ENST00000444457 USP31Q70CQ4 1352 aa23.39■■□□□ 1.33
PMPCB-204ENST00000444457 GCC1Q96CN9 775 aa23.38■■□□□ 1.33
PMPCB-204ENST00000444457 SLC26A8Q96RN1 970 aa23.38■■□□□ 1.33
PMPCB-204ENST00000444457 API5Q9BZZ5 524 aaKnown RBP23.38■■□□□ 1.33
PMPCB-204ENST00000444457 SSH2Q76I76 1423 aa23.37■■□□□ 1.33
PMPCB-204ENST00000444457 KLHL40Q2TBA0 621 aa23.37■■□□□ 1.33
PMPCB-204ENST00000444457 SLIT1O75093 1534 aa23.37■■□□□ 1.33
PMPCB-204ENST00000444457 CEBPAP49715 358 aaPredicted RBP23.36■■□□□ 1.33
PMPCB-204ENST00000444457 RBM10P98175 930 aaKnown RBP23.36■■□□□ 1.33
PMPCB-204ENST00000444457 PODXL2Q9NZ53 605 aa23.36■■□□□ 1.33
PMPCB-204ENST00000444457 FMN2Q9NZ56 1722 aa23.36■■□□□ 1.33
PMPCB-204ENST00000444457 EID1Q9Y6B2 187 aa23.36■■□□□ 1.33
PMPCB-204ENST00000444457 HSP90AB2PQ58FF8 381 aa23.35■■□□□ 1.33
PMPCB-204ENST00000444457 KIF2CQ99661 725 aa23.35■■□□□ 1.33
PMPCB-204ENST00000444457 ARHGAP23Q9P227 1491 aa23.35■■□□□ 1.33
PMPCB-204ENST00000444457 KIF24Q5T7B8 1368 aa23.34■■□□□ 1.33
PMPCB-204ENST00000444457 GOLGA6L22H0YM25 854 aa23.34■■□□□ 1.33
PMPCB-204ENST00000444457 ZNF500O60304 480 aaPredicted RBP23.34■■□□□ 1.33
PMPCB-204ENST00000444457 ANKRD45Q5TZF3 282 aa23.34■■□□□ 1.33
PMPCB-204ENST00000444457 SIRT2Q8IXJ6 389 aa23.34■■□□□ 1.33
PMPCB-204ENST00000444457 RGPD8O14715 1765 aaPredicted RBP23.33■■□□□ 1.32
PMPCB-204ENST00000444457 NOL7Q9UMY1 257 aaKnown RBP23.33■■□□□ 1.32
PMPCB-204ENST00000444457 AMOTL2Q9Y2J4 779 aa23.33■■□□□ 1.32
PMPCB-204ENST00000444457 ZNF445P59923 1031 aa23.32■■□□□ 1.32
PMPCB-204ENST00000444457 BMP2KLQ5H9B9 411 aa23.32■■□□□ 1.32
PMPCB-204ENST00000444457 TTC21AQ8NDW8 1320 aa23.32■■□□□ 1.32
PMPCB-204ENST00000444457 K7ELQ4 463 aaPredicted RBP23.32■■□□□ 1.32
PMPCB-204ENST00000444457 CHL1O00533 1208 aa23.32■■□□□ 1.32
PMPCB-204ENST00000444457 MCM10Q7L590 875 aa23.31■■□□□ 1.32
PMPCB-204ENST00000444457 R3HCC1Q9Y3T6 440 aaKnown RBP23.31■■□□□ 1.32
PMPCB-204ENST00000444457 DIP2AQ14689 1571 aa23.31■■□□□ 1.32
PMPCB-204ENST00000444457 FAM13BQ9NYF5 915 aa23.3■■□□□ 1.32
PMPCB-204ENST00000444457 CD2BP2O95400 341 aaKnown RBP23.3■■□□□ 1.32
PMPCB-204ENST00000444457 SSFA2P28290 1259 aa23.3■■□□□ 1.32
PMPCB-204ENST00000444457 HAP1P54257 671 aaPredicted RBP23.3■■□□□ 1.32
PMPCB-204ENST00000444457 DDX49Q9Y6V7 483 aaKnown RBP23.3■■□□□ 1.32
PMPCB-204ENST00000444457 ARHGEF10O15013 1369 aa23.3■■□□□ 1.32
PMPCB-204ENST00000444457 KIAA0232Q92628 1395 aa23.3■■□□□ 1.32
PMPCB-204ENST00000444457 SOX12O15370 315 aa23.29■■□□□ 1.32
PMPCB-204ENST00000444457 MTERF4Q7Z6M4 381 aaKnown RBP23.29■■□□□ 1.32
PMPCB-204ENST00000444457 TBX22Q9Y458 520 aa23.29■■□□□ 1.32
PMPCB-204ENST00000444457 KRT24Q2M2I5 525 aa23.29■■□□□ 1.32
PMPCB-204ENST00000444457 PDLIM2Q96JY6 352 aa23.29■■□□□ 1.32
PMPCB-204ENST00000444457 FER1L4A9Z1Z3 1794 aa23.28■■□□□ 1.32
PMPCB-204ENST00000444457 MAP3K19Q56UN5 1328 aa23.28■■□□□ 1.32
PMPCB-204ENST00000444457 RGS12O14924 1447 aa23.28■■□□□ 1.32
PMPCB-204ENST00000444457 RIMS1Q86UR5 1692 aaKnown RBP23.28■■□□□ 1.32
PMPCB-204ENST00000444457 SMAP1Q8IYB5 467 aaPredicted RBP23.28■■□□□ 1.32
PMPCB-204ENST00000444457 BAG4O95429 457 aaKnown RBP23.27■■□□□ 1.32
PMPCB-204ENST00000444457 INTS3Q68E01 1043 aaKnown RBP23.27■■□□□ 1.32
PMPCB-204ENST00000444457 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.27■■□□□ 1.32
PMPCB-204ENST00000444457 CRB1P82279 1406 aa23.27■■□□□ 1.32
PMPCB-204ENST00000444457 SBNO1A3KN83 1393 aa23.26■■□□□ 1.31
PMPCB-204ENST00000444457 FLT4P35916 1363 aa23.26■■□□□ 1.31
PMPCB-204ENST00000444457 UQCRHLA0A096LP55 91 aa23.26■■□□□ 1.31
PMPCB-204ENST00000444457 UQCRHP07919 91 aa23.26■■□□□ 1.31
PMPCB-204ENST00000444457 PIK3C2AO00443 1686 aa23.26■■□□□ 1.31
PMPCB-204ENST00000444457 FOXD4L1Q9NU39 408 aa23.26■■□□□ 1.31
PMPCB-204ENST00000444457 XRN1Q8IZH2 1706 aaKnown RBP23.25■■□□□ 1.31
PMPCB-204ENST00000444457 DYNC1I1O14576 645 aa23.25■■□□□ 1.31
PMPCB-204ENST00000444457 GAS2L2Q8NHY3 880 aa23.24■■□□□ 1.31
PMPCB-204ENST00000444457 NGDNQ8NEJ9 315 aaKnown RBP23.23■■□□□ 1.31
PMPCB-204ENST00000444457 KDRP35968 1356 aa23.23■■□□□ 1.31
PMPCB-204ENST00000444457 ATP10DQ9P241 1426 aa23.22■■□□□ 1.31
PMPCB-204ENST00000444457 CSPP1Q1MSJ5 1256 aa23.22■■□□□ 1.31
PMPCB-204ENST00000444457 PTPRCP08575 1304 aa23.22■■□□□ 1.31
PMPCB-204ENST00000444457 MCM5P33992 734 aa23.21■■□□□ 1.31
PMPCB-204ENST00000444457 XPCQ01831 940 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms