RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 ZCRB1Q8TBF4 217 aaKnown RBP27.74■■■□□ 2.03
EDEM1-203ENST00000443790 SLC27A3Q5K4L6 730 aa27.73■■■□□ 2.03
EDEM1-203ENST00000443790 NBPF6Q5VWK0 638 aa27.73■■■□□ 2.03
EDEM1-203ENST00000443790 NBPF4Q96M43 638 aa27.73■■■□□ 2.03
EDEM1-203ENST00000443790 NSD2O96028 1365 aa27.73■■■□□ 2.03
EDEM1-203ENST00000443790 SYTL4Q96C24 671 aaPredicted RBP27.72■■■□□ 2.03
EDEM1-203ENST00000443790 PRIM1P49642 420 aaKnown RBP27.71■■■□□ 2.03
EDEM1-203ENST00000443790 FHDC1Q9C0D6 1143 aaPredicted RBP27.71■■■□□ 2.03
EDEM1-203ENST00000443790 QSER1Q2KHR3 1735 aa27.7■■■□□ 2.03
EDEM1-203ENST00000443790 AKT1S1Q96B36 256 aa27.7■■■□□ 2.02
EDEM1-203ENST00000443790 INSRP06213 1382 aa27.7■■■□□ 2.02
EDEM1-203ENST00000443790 LY75O60449 1722 aa27.7■■■□□ 2.02
EDEM1-203ENST00000443790 CGNL1Q0VF96 1302 aa27.69■■■□□ 2.02
EDEM1-203ENST00000443790 USHBP1Q8N6Y0 703 aa27.69■■■□□ 2.02
EDEM1-203ENST00000443790 FLT4P35916 1363 aa27.69■■■□□ 2.02
EDEM1-203ENST00000443790 KIF24Q5T7B8 1368 aa27.69■■■□□ 2.02
EDEM1-203ENST00000443790 SYT17Q9BSW7 474 aa27.68■■■□□ 2.02
EDEM1-203ENST00000443790 HSP90AB2PQ58FF8 381 aa27.67■■■□□ 2.02
EDEM1-203ENST00000443790 RAPGEF4Q8WZA2 1011 aa27.67■■■□□ 2.02
EDEM1-203ENST00000443790 TIMELESSQ9UNS1 1208 aa27.67■■■□□ 2.02
EDEM1-203ENST00000443790 NSD3Q9BZ95 1437 aa27.67■■■□□ 2.02
EDEM1-203ENST00000443790 CARD14Q9BXL6 1004 aa27.66■■■□□ 2.02
EDEM1-203ENST00000443790 ARXQ96QS3 562 aa27.65■■■□□ 2.02
EDEM1-203ENST00000443790 KCNQ4P56696 695 aa27.64■■■□□ 2.02
EDEM1-203ENST00000443790 TUBGCP6Q96RT7 1819 aa27.64■■■□□ 2.01
EDEM1-203ENST00000443790 TATP17735 454 aaPredicted RBP27.63■■■□□ 2.01
EDEM1-203ENST00000443790 PNPLA7Q6ZV29 1317 aa27.63■■■□□ 2.01
EDEM1-203ENST00000443790 MAP3K5Q99683 1374 aa27.62■■■□□ 2.01
EDEM1-203ENST00000443790 SLC16A10Q8TF71 515 aa27.62■■■□□ 2.01
EDEM1-203ENST00000443790 PCDH11XQ9BZA7 1347 aa27.61■■■□□ 2.01
EDEM1-203ENST00000443790 PCDH11YQ9BZA8 1340 aa27.61■■■□□ 2.01
EDEM1-203ENST00000443790 CLSPNQ9HAW4 1339 aa27.61■■■□□ 2.01
EDEM1-203ENST00000443790 TFCP2L1Q9NZI6 479 aa27.6■■■□□ 2.01
EDEM1-203ENST00000443790 EMILIN1Q9Y6C2 1016 aa27.6■■■□□ 2.01
EDEM1-203ENST00000443790 COL24A1Q17RW2 1714 aa27.6■■■□□ 2.01
EDEM1-203ENST00000443790 ANKRD26Q9UPS8 1709 aa27.6■■■□□ 2.01
EDEM1-203ENST00000443790 CCNL1Q9UK58 526 aaPredicted RBP27.59■■■□□ 2.01
EDEM1-203ENST00000443790 UTRNP46939 3433 aa27.58■■■□□ 2.01
EDEM1-203ENST00000443790 NCAPD2Q15021 1401 aa27.56■■■□□ 2
EDEM1-203ENST00000443790 PKD1L3Q7Z443 1732 aa27.55■■■□□ 2
EDEM1-203ENST00000443790 POLD1P28340 1107 aa27.54■■■□□ 2
EDEM1-203ENST00000443790 TOGARAM1Q9Y4F4 1720 aa27.53■■■□□ 2
EDEM1-203ENST00000443790 CYP27B1O15528 508 aa27.52■■■□□ 2
EDEM1-203ENST00000443790 C5P01031 1676 aa27.52■■■□□ 2
EDEM1-203ENST00000443790 PPM1GO15355 546 aaPredicted RBP27.51■■□□□ 1.99
EDEM1-203ENST00000443790 CCER1Q8TC90 406 aaPredicted RBP27.51■■□□□ 1.99
EDEM1-203ENST00000443790 WASHC2AQ641Q2 1341 aa27.5■■□□□ 1.99
EDEM1-203ENST00000443790 PALLDQ8WX93 1383 aa27.49■■□□□ 1.99
EDEM1-203ENST00000443790 MPRIPQ6WCQ1 1025 aa27.48■■□□□ 1.99
EDEM1-203ENST00000443790 KLHL34Q8N239 644 aa27.48■■□□□ 1.99
EDEM1-203ENST00000443790 MAP2P11137 1827 aaKnown RBP27.48■■□□□ 1.99
EDEM1-203ENST00000443790 ITGB4P16144 1822 aa27.47■■□□□ 1.99
EDEM1-203ENST00000443790 CHD4Q14839 1912 aa27.46■■□□□ 1.99
EDEM1-203ENST00000443790 COL23A1Q86Y22 540 aaPredicted RBP27.46■■□□□ 1.99
EDEM1-203ENST00000443790 TAF1LQ8IZX4 1826 aa27.46■■□□□ 1.99
EDEM1-203ENST00000443790 POLR3GLQ9BT43 218 aa27.45■■□□□ 1.98
EDEM1-203ENST00000443790 POLKQ9UBT6 870 aa27.45■■□□□ 1.98
EDEM1-203ENST00000443790 MSH5O43196 834 aa27.44■■□□□ 1.98
EDEM1-203ENST00000443790 EYA1Q99502 592 aa27.44■■□□□ 1.98
EDEM1-203ENST00000443790 SPG7Q9UQ90 795 aa27.44■■□□□ 1.98
EDEM1-203ENST00000443790 NKX1-1Q15270 411 aaPredicted RBP27.43■■□□□ 1.98
EDEM1-203ENST00000443790 ZNF784Q8NCA9 323 aaPredicted RBP27.43■■□□□ 1.98
EDEM1-203ENST00000443790 HMGB2P26583 209 aaKnown RBP27.42■■□□□ 1.98
EDEM1-203ENST00000443790 GPR162Q16538 588 aa27.42■■□□□ 1.98
EDEM1-203ENST00000443790 SMARCC1Q92922 1105 aaPredicted RBP27.42■■□□□ 1.98
EDEM1-203ENST00000443790 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.41■■□□□ 1.98
EDEM1-203ENST00000443790 C4BP0C0L5 1744 aa27.41■■□□□ 1.98
EDEM1-203ENST00000443790 EIF4G2P78344 907 aaKnown RBP eCLIP27.4■■□□□ 1.98
EDEM1-203ENST00000443790 NLGN2Q8NFZ4 835 aa27.4■■□□□ 1.98
EDEM1-203ENST00000443790 GOLGB1Q14789 3259 aaKnown RBP27.4■■□□□ 1.98
EDEM1-203ENST00000443790 PIGBQ92521 554 aa27.39■■□□□ 1.98
EDEM1-203ENST00000443790 MSL1Q68DK7 614 aa27.38■■□□□ 1.97
EDEM1-203ENST00000443790 FLAD1Q8NFF5 587 aa27.38■■□□□ 1.97
EDEM1-203ENST00000443790 HSPA5P11021 654 aaKnown RBP27.37■■□□□ 1.97
EDEM1-203ENST00000443790 TNNT2P45379 298 aaPredicted RBP27.37■■□□□ 1.97
EDEM1-203ENST00000443790 EIF4A2Q14240 407 aaKnown RBP27.37■■□□□ 1.97
EDEM1-203ENST00000443790 PLEKHG2Q9H7P9 1386 aa27.35■■□□□ 1.97
EDEM1-203ENST00000443790 PELP1Q8IZL8 1130 aaKnown RBP27.35■■□□□ 1.97
EDEM1-203ENST00000443790 PHKG2P15735 406 aa27.34■■□□□ 1.97
EDEM1-203ENST00000443790 IFNL2Q8IZJ0 200 aa27.34■■□□□ 1.97
EDEM1-203ENST00000443790 AK7Q96M32 723 aa27.34■■□□□ 1.97
EDEM1-203ENST00000443790 PANK3Q9H999 370 aa27.33■■□□□ 1.97
EDEM1-203ENST00000443790 TMOD3Q9NYL9 352 aa27.33■■□□□ 1.97
EDEM1-203ENST00000443790 UBR3Q6ZT12 1888 aa27.33■■□□□ 1.97
EDEM1-203ENST00000443790 IGSF1Q8N6C5 1336 aa27.32■■□□□ 1.96
EDEM1-203ENST00000443790 LOC102724428A0A0B4J2F2 783 aa27.31■■□□□ 1.96
EDEM1-203ENST00000443790 SIK1P57059 783 aa27.31■■□□□ 1.96
EDEM1-203ENST00000443790 AMIGO3Q86WK7 504 aa27.31■■□□□ 1.96
EDEM1-203ENST00000443790 LINC00116Q8NCU8 138 aa27.28■■□□□ 1.96
EDEM1-203ENST00000443790 ASAP1Q9ULH1 1129 aa27.28■■□□□ 1.96
EDEM1-203ENST00000443790 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.27■■□□□ 1.96
EDEM1-203ENST00000443790 PHF14O94880 888 aa27.27■■□□□ 1.96
EDEM1-203ENST00000443790 YBX3P16989 372 aaKnown RBP eCLIP27.27■■□□□ 1.96
EDEM1-203ENST00000443790 SSFA2P28290 1259 aa27.26■■□□□ 1.95
EDEM1-203ENST00000443790 CD2APQ9Y5K6 639 aa27.26■■□□□ 1.95
EDEM1-203ENST00000443790 ITPK1Q13572 414 aa27.25■■□□□ 1.95
EDEM1-203ENST00000443790 SMIM5Q71RC9 77 aa27.25■■□□□ 1.95
EDEM1-203ENST00000443790 GRIN3BO60391 1043 aa27.24■■□□□ 1.95
EDEM1-203ENST00000443790 ATG3Q9NT62 314 aa27.24■■□□□ 1.95
EDEM1-203ENST00000443790 ATP6V1AP38606 617 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 277.1 ms