RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 NBPF14Q5TI25 921 aa28.06■■■□□ 2.08
UBE2D4-205ENST00000443780 KIF7Q2M1P5 1343 aa28.05■■■□□ 2.08
UBE2D4-205ENST00000443780 WASHC2AQ641Q2 1341 aa28.04■■■□□ 2.08
UBE2D4-205ENST00000443780 ZCRB1Q8TBF4 217 aaKnown RBP28.04■■■□□ 2.08
UBE2D4-205ENST00000443780 POLKQ9UBT6 870 aa28.04■■■□□ 2.08
UBE2D4-205ENST00000443780 PROM2Q8N271 834 aa28.03■■■□□ 2.08
UBE2D4-205ENST00000443780 NSD2O96028 1365 aa28.02■■■□□ 2.08
UBE2D4-205ENST00000443780 TNNT2P45379 298 aaPredicted RBP28.02■■■□□ 2.08
UBE2D4-205ENST00000443780 RAPGEF4Q8WZA2 1011 aa28.02■■■□□ 2.08
UBE2D4-205ENST00000443780 DOT1LQ8TEK3 1739 aa28■■■□□ 2.07
UBE2D4-205ENST00000443780 TATP17735 454 aaPredicted RBP27.99■■■□□ 2.07
UBE2D4-205ENST00000443780 KNSTRNQ9Y448 316 aa27.99■■■□□ 2.07
UBE2D4-205ENST00000443780 TXNRD1Q16881 649 aa27.98■■■□□ 2.07
UBE2D4-205ENST00000443780 NCAPD2Q15021 1401 aa27.96■■■□□ 2.07
UBE2D4-205ENST00000443780 PKD1L3Q7Z443 1732 aa27.95■■■□□ 2.06
UBE2D4-205ENST00000443780 MORC1Q86VD1 984 aa27.94■■■□□ 2.06
UBE2D4-205ENST00000443780 ANO8Q9HCE9 1232 aaPredicted RBP27.94■■■□□ 2.06
UBE2D4-205ENST00000443780 EYA1Q99502 592 aa27.92■■■□□ 2.06
UBE2D4-205ENST00000443780 PRIM1P49642 420 aaKnown RBP27.91■■■□□ 2.06
UBE2D4-205ENST00000443780 EIF4A2Q14240 407 aaKnown RBP27.9■■■□□ 2.06
UBE2D4-205ENST00000443780 AMER1Q5JTC6 1135 aaPredicted RBP27.9■■■□□ 2.06
UBE2D4-205ENST00000443780 SYTL4Q96C24 671 aaPredicted RBP27.9■■■□□ 2.06
UBE2D4-205ENST00000443780 PCDH11XQ9BZA7 1347 aa27.9■■■□□ 2.06
UBE2D4-205ENST00000443780 PCDH11YQ9BZA8 1340 aa27.9■■■□□ 2.06
UBE2D4-205ENST00000443780 CASZ1Q86V15 1759 aa27.88■■■□□ 2.05
UBE2D4-205ENST00000443780 LY75O60449 1722 aa27.87■■■□□ 2.05
UBE2D4-205ENST00000443780 PER1O15534 1290 aaPredicted RBP27.87■■■□□ 2.05
UBE2D4-205ENST00000443780 ITGB4P16144 1822 aa27.87■■■□□ 2.05
UBE2D4-205ENST00000443780 PAPPAQ13219 1627 aa27.86■■■□□ 2.05
UBE2D4-205ENST00000443780 CYP27B1O15528 508 aa27.86■■■□□ 2.05
UBE2D4-205ENST00000443780 STK32BQ9NY57 414 aa27.86■■■□□ 2.05
UBE2D4-205ENST00000443780 SLC15A2Q16348 729 aa27.84■■■□□ 2.05
UBE2D4-205ENST00000443780 SPG7Q9UQ90 795 aa27.83■■■□□ 2.05
UBE2D4-205ENST00000443780 TOGARAM1Q9Y4F4 1720 aa27.83■■■□□ 2.05
UBE2D4-205ENST00000443780 LRRC4BQ9NT99 713 aa27.82■■■□□ 2.04
UBE2D4-205ENST00000443780 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.82■■■□□ 2.04
UBE2D4-205ENST00000443780 IGSF1Q8N6C5 1336 aa27.82■■■□□ 2.04
UBE2D4-205ENST00000443780 SLC27A3Q5K4L6 730 aa27.8■■■□□ 2.04
UBE2D4-205ENST00000443780 PDGFDQ9GZP0 370 aaPredicted RBP27.79■■■□□ 2.04
UBE2D4-205ENST00000443780 SPON1Q9HCB6 807 aa27.79■■■□□ 2.04
UBE2D4-205ENST00000443780 PLEKHG2Q9H7P9 1386 aa27.77■■■□□ 2.04
UBE2D4-205ENST00000443780 NKX1-1Q15270 411 aaPredicted RBP27.77■■■□□ 2.04
UBE2D4-205ENST00000443780 CC2D1BQ5T0F9 858 aaKnown RBP27.76■■■□□ 2.03
UBE2D4-205ENST00000443780 QSER1Q2KHR3 1735 aa27.75■■■□□ 2.03
UBE2D4-205ENST00000443780 ZNF827Q17R98 1081 aa27.74■■■□□ 2.03
UBE2D4-205ENST00000443780 MPRIPQ6WCQ1 1025 aa27.74■■■□□ 2.03
UBE2D4-205ENST00000443780 NPC1L1Q9UHC9 1359 aa27.73■■■□□ 2.03
UBE2D4-205ENST00000443780 KCNQ4P56696 695 aa27.73■■■□□ 2.03
UBE2D4-205ENST00000443780 IFNL2Q8IZJ0 200 aa27.73■■■□□ 2.03
UBE2D4-205ENST00000443780 TUBGCP6Q96RT7 1819 aa27.73■■■□□ 2.03
UBE2D4-205ENST00000443780 PHKG2P15735 406 aa27.72■■■□□ 2.03
UBE2D4-205ENST00000443780 MTHFSP49914 203 aa27.72■■■□□ 2.03
UBE2D4-205ENST00000443780 AKT1S1Q96B36 256 aa27.72■■■□□ 2.03
UBE2D4-205ENST00000443780 TAF1LQ8IZX4 1826 aa27.71■■■□□ 2.03
UBE2D4-205ENST00000443780 ZBTB7AO95365 584 aa27.71■■■□□ 2.03
UBE2D4-205ENST00000443780 IL13P35225 146 aa27.71■■■□□ 2.03
UBE2D4-205ENST00000443780 CCNL1Q9UK58 526 aaPredicted RBP27.71■■■□□ 2.03
UBE2D4-205ENST00000443780 AEBP1Q8IUX7 1158 aa27.7■■■□□ 2.02
UBE2D4-205ENST00000443780 PLEKHO1Q53GL0 409 aaPredicted RBP27.68■■■□□ 2.02
UBE2D4-205ENST00000443780 C5P01031 1676 aa27.68■■■□□ 2.02
UBE2D4-205ENST00000443780 SULT6B1Q6IMI4 303 aa27.67■■■□□ 2.02
UBE2D4-205ENST00000443780 PIGBQ92521 554 aa27.67■■■□□ 2.02
UBE2D4-205ENST00000443780 PPP1R1BQ9UD71 204 aaPredicted RBP27.67■■■□□ 2.02
UBE2D4-205ENST00000443780 KDRP35968 1356 aa27.67■■■□□ 2.02
UBE2D4-205ENST00000443780 PALLDQ8WX93 1383 aa27.67■■■□□ 2.02
UBE2D4-205ENST00000443780 CNGB1Q14028 1251 aaPredicted RBP27.66■■■□□ 2.02
UBE2D4-205ENST00000443780 SMARCC1Q92922 1105 aaPredicted RBP27.66■■■□□ 2.02
UBE2D4-205ENST00000443780 ATF5Q9Y2D1 282 aaPredicted RBP27.66■■■□□ 2.02
UBE2D4-205ENST00000443780 AMOTQ4VCS5 1084 aa27.65■■■□□ 2.02
UBE2D4-205ENST00000443780 MTFR1LQ9H019 292 aa27.65■■■□□ 2.02
UBE2D4-205ENST00000443780 PTGER2P43116 358 aa27.64■■■□□ 2.02
UBE2D4-205ENST00000443780 TMOD3Q9NYL9 352 aa27.64■■■□□ 2.02
UBE2D4-205ENST00000443780 ZNF530Q6P9A1 599 aaPredicted RBP27.63■■■□□ 2.01
UBE2D4-205ENST00000443780 TFCP2L1Q9NZI6 479 aa27.63■■■□□ 2.01
UBE2D4-205ENST00000443780 PNPLA7Q6ZV29 1317 aa27.62■■■□□ 2.01
UBE2D4-205ENST00000443780 HSP90AB1P08238 724 aaKnown RBP27.61■■■□□ 2.01
UBE2D4-205ENST00000443780 DIAPH1O60610 1272 aaKnown RBP27.6■■■□□ 2.01
UBE2D4-205ENST00000443780 DCAF5Q96JK2 942 aa27.6■■■□□ 2.01
UBE2D4-205ENST00000443780 HMGB2P26583 209 aaKnown RBP27.59■■■□□ 2.01
UBE2D4-205ENST00000443780 VIRMAQ69YN4 1812 aaKnown RBP27.59■■■□□ 2.01
UBE2D4-205ENST00000443780 COL24A1Q17RW2 1714 aa27.58■■■□□ 2.01
UBE2D4-205ENST00000443780 ERVV-2B6SEH9 535 aa27.58■■■□□ 2.01
UBE2D4-205ENST00000443780 SLC16A10Q8TF71 515 aa27.58■■■□□ 2.01
UBE2D4-205ENST00000443780 SGIP1Q9BQI5 828 aa27.58■■■□□ 2.01
UBE2D4-205ENST00000443780 SCN11AQ9UI33 1791 aa27.58■■■□□ 2
UBE2D4-205ENST00000443780 COL3A1P02461 1466 aaPredicted RBP27.57■■■□□ 2
UBE2D4-205ENST00000443780 ASAP1Q9ULH1 1129 aa27.57■■■□□ 2
UBE2D4-205ENST00000443780 C4BP0C0L5 1744 aa27.57■■■□□ 2
UBE2D4-205ENST00000443780 KDM6AO15550 1401 aaPredicted RBP27.57■■■□□ 2
UBE2D4-205ENST00000443780 HMOX1P09601 288 aa27.56■■■□□ 2
UBE2D4-205ENST00000443780 C1orf141Q5JVX7 400 aa27.56■■■□□ 2
UBE2D4-205ENST00000443780 LOC102724428A0A0B4J2F2 783 aa27.54■■■□□ 2
UBE2D4-205ENST00000443780 SIK1P57059 783 aa27.54■■■□□ 2
UBE2D4-205ENST00000443780 UBR3Q6ZT12 1888 aa27.54■■■□□ 2
UBE2D4-205ENST00000443780 ATG3Q9NT62 314 aa27.54■■■□□ 2
UBE2D4-205ENST00000443780 CABP4P57796 275 aa27.51■■□□□ 1.99
UBE2D4-205ENST00000443780 COL23A1Q86Y22 540 aaPredicted RBP27.51■■□□□ 1.99
UBE2D4-205ENST00000443780 ZNF831Q5JPB2 1677 aa27.49■■□□□ 1.99
UBE2D4-205ENST00000443780 ARXQ96QS3 562 aa27.49■■□□□ 1.99
UBE2D4-205ENST00000443780 MSH5O43196 834 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms