RNA–Protein interactions for RNA: ENST00000442744.6

UBA52-202, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA52, Length 2,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-202ENST00000442744 RFX1P22670 979 aa13.17□□□□□ -0.3
UBA52-202ENST00000442744 ISY1Q9ULR0 285 aaKnown RBP13.17□□□□□ -0.3
UBA52-202ENST00000442744 COG6Q9Y2V7 657 aa13.17□□□□□ -0.3
UBA52-202ENST00000442744 KDM5CP41229 1560 aa13.16□□□□□ -0.3
UBA52-202ENST00000442744 SMC3Q9UQE7 1217 aa13.16□□□□□ -0.3
UBA52-202ENST00000442744 TMC1Q8TDI8 760 aa13.16□□□□□ -0.3
UBA52-202ENST00000442744 PIF1Q9H611 641 aa13.16□□□□□ -0.3
UBA52-202ENST00000442744 KIF14Q15058 1648 aa13.16□□□□□ -0.3
UBA52-202ENST00000442744 RNF123Q5XPI4 1314 aa13.15□□□□□ -0.3
UBA52-202ENST00000442744 TBC1D12O60347 775 aa13.15□□□□□ -0.3
UBA52-202ENST00000442744 CSB-PGBD3P0DP91 1061 aa13.15□□□□□ -0.3
UBA52-202ENST00000442744 PLEKHG6Q3KR16 790 aa13.15□□□□□ -0.3
UBA52-202ENST00000442744 ZNF512BQ96KM6 892 aaPredicted RBP13.15□□□□□ -0.3
UBA52-202ENST00000442744 QTRT2Q9H974 415 aaKnown RBP13.15□□□□□ -0.3
UBA52-202ENST00000442744 SFMBT1Q9UHJ3 866 aa13.15□□□□□ -0.3
UBA52-202ENST00000442744 DIS3Q9Y2L1 958 aaKnown RBP13.15□□□□□ -0.3
UBA52-202ENST00000442744 KIAA1107Q9UPP5 1409 aa13.15□□□□□ -0.3
UBA52-202ENST00000442744 STK25O00506 426 aa13.15□□□□□ -0.3
UBA52-202ENST00000442744 RAPGEF6Q8TEU7 1601 aa13.14□□□□□ -0.31
UBA52-202ENST00000442744 CCDC144BQ3MJ40 725 aa13.14□□□□□ -0.31
UBA52-202ENST00000442744 DNTTIP2Q5QJE6 756 aaKnown RBP13.14□□□□□ -0.31
UBA52-202ENST00000442744 FMNL3Q8IVF7 1028 aa13.14□□□□□ -0.31
UBA52-202ENST00000442744 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.14□□□□□ -0.31
UBA52-202ENST00000442744 PLB1Q6P1J6 1458 aa13.14□□□□□ -0.31
UBA52-202ENST00000442744 KIAA0586Q9BVV6 1533 aa13.14□□□□□ -0.31
UBA52-202ENST00000442744 VDRP11473 427 aa13.14□□□□□ -0.31
UBA52-202ENST00000442744 TBX22Q9Y458 520 aa13.14□□□□□ -0.31
UBA52-202ENST00000442744 ST20-MTHFSA0A0A6YYL1 179 aa13.13□□□□□ -0.31
UBA52-202ENST00000442744 CARD11Q9BXL7 1154 aa13.13□□□□□ -0.31
UBA52-202ENST00000442744 NAT1P18440 290 aa13.12□□□□□ -0.31
UBA52-202ENST00000442744 HDLBPQ00341 1268 aaKnown RBP13.12□□□□□ -0.31
UBA52-202ENST00000442744 HSCBQ8IWL3 235 aa13.12□□□□□ -0.31
UBA52-202ENST00000442744 IL17RAQ96F46 866 aa13.12□□□□□ -0.31
UBA52-202ENST00000442744 IBSPP21815 317 aaPredicted RBP13.12□□□□□ -0.31
UBA52-202ENST00000442744 DHX38Q92620 1227 aaKnown RBP13.12□□□□□ -0.31
UBA52-202ENST00000442744 DDX27Q96GQ7 796 aaKnown RBP13.12□□□□□ -0.31
UBA52-202ENST00000442744 GPATCH8Q9UKJ3 1502 aaKnown RBP13.12□□□□□ -0.31
UBA52-202ENST00000442744 RECKO95980 971 aa13.12□□□□□ -0.31
UBA52-202ENST00000442744 STAG1Q8WVM7 1258 aa13.12□□□□□ -0.31
UBA52-202ENST00000442744 CXorf56Q9H5V9 222 aa13.12□□□□□ -0.31
UBA52-202ENST00000442744 CBFA2T2O43439 604 aa13.11□□□□□ -0.31
UBA52-202ENST00000442744 FLT3P36888 993 aa13.11□□□□□ -0.31
UBA52-202ENST00000442744 ACRBPQ8NEB7 543 aa13.11□□□□□ -0.31
UBA52-202ENST00000442744 PBXIP1Q96AQ6 731 aa13.11□□□□□ -0.31
UBA52-202ENST00000442744 CALR3Q96L12 384 aaKnown RBP13.11□□□□□ -0.31
UBA52-202ENST00000442744 SPC25Q9HBM1 224 aa13.11□□□□□ -0.31
UBA52-202ENST00000442744 CC2D1AQ6P1N0 951 aaPredicted RBP13.11□□□□□ -0.31
UBA52-202ENST00000442744 NT5DC4Q86YG4 428 aa13.11□□□□□ -0.31
UBA52-202ENST00000442744 RPUSD2Q8IZ73 545 aaKnown RBP13.11□□□□□ -0.31
UBA52-202ENST00000442744 EXOC6Q8TAG9 804 aa13.11□□□□□ -0.31
UBA52-202ENST00000442744 SCINQ9Y6U3 715 aa13.11□□□□□ -0.31
UBA52-202ENST00000442744 TGFB3P10600 412 aa13.1□□□□□ -0.31
UBA52-202ENST00000442744 SKAP1Q86WV1 359 aa13.1□□□□□ -0.31
UBA52-202ENST00000442744 CEP63Q96MT8 703 aa13.1□□□□□ -0.31
UBA52-202ENST00000442744 CDC5LQ99459 802 aaKnown RBP13.1□□□□□ -0.31
UBA52-202ENST00000442744 ADGBQ8N7X0 1667 aa13.1□□□□□ -0.31
UBA52-202ENST00000442744 TROQ12816 1431 aaPredicted RBP13.1□□□□□ -0.31
UBA52-202ENST00000442744 SYNRGQ9UMZ2 1314 aa13.09□□□□□ -0.31
UBA52-202ENST00000442744 ARPC5LQ9BPX5 153 aa13.09□□□□□ -0.31
UBA52-202ENST00000442744 ABCF2Q9UG63 623 aa13.09□□□□□ -0.31
UBA52-202ENST00000442744 ANKRD50Q9ULJ7 1429 aa13.09□□□□□ -0.31
UBA52-202ENST00000442744 NUP155O75694 1391 aa13.09□□□□□ -0.31
UBA52-202ENST00000442744 GIGYF1O75420 1035 aaPredicted RBP13.09□□□□□ -0.31
UBA52-202ENST00000442744 CD53P19397 219 aa13.09□□□□□ -0.31
UBA52-202ENST00000442744 DCAF11Q8TEB1 546 aa13.09□□□□□ -0.31
UBA52-202ENST00000442744 IPO9Q96P70 1041 aaKnown RBP13.09□□□□□ -0.31
UBA52-202ENST00000442744 PPP4R3BQ5MIZ7 849 aa13.08□□□□□ -0.31
UBA52-202ENST00000442744 C1QTNF12Q5T7M4 302 aa13.08□□□□□ -0.31
UBA52-202ENST00000442744 PCGF5Q86SE9 256 aa13.08□□□□□ -0.31
UBA52-202ENST00000442744 ITFG2Q969R8 447 aa13.08□□□□□ -0.31
UBA52-202ENST00000442744 MUC3BQ9H195 1237 aa13.08□□□□□ -0.31
UBA52-202ENST00000442744 ZBTB47Q9UFB7 747 aaPredicted RBP13.08□□□□□ -0.31
UBA52-202ENST00000442744 SHROOM2Q13796 1616 aa13.08□□□□□ -0.32
UBA52-202ENST00000442744 TNNT2P45379 298 aaPredicted RBP13.08□□□□□ -0.32
UBA52-202ENST00000442744 XPCQ01831 940 aaPredicted RBP13.08□□□□□ -0.32
UBA52-202ENST00000442744 EP400NLQ6ZTU2 488 aa13.08□□□□□ -0.32
UBA52-202ENST00000442744 NPAS4Q8IUM7 802 aa13.08□□□□□ -0.32
UBA52-202ENST00000442744 JPH4Q96JJ6 628 aa13.08□□□□□ -0.32
UBA52-202ENST00000442744 USP5P45974 858 aa13.08□□□□□ -0.32
UBA52-202ENST00000442744 TAGLNQ01995 201 aaKnown RBP13.08□□□□□ -0.32
UBA52-202ENST00000442744 C9orf131Q5VYM1 1079 aa13.08□□□□□ -0.32
UBA52-202ENST00000442744 GPIHBP1Q8IV16 184 aa13.08□□□□□ -0.32
UBA52-202ENST00000442744 SEZ6LQ9BYH1 1024 aa13.08□□□□□ -0.32
UBA52-202ENST00000442744 TANGO6Q9C0B7 1094 aa13.08□□□□□ -0.32
UBA52-202ENST00000442744 FAM13BQ9NYF5 915 aa13.08□□□□□ -0.32
UBA52-202ENST00000442744 ANAPC4Q9UJX5 808 aa13.08□□□□□ -0.32
UBA52-202ENST00000442744 CROCC2H7BZ55 1655 aa13.07□□□□□ -0.32
UBA52-202ENST00000442744 PPP1R12AO14974 1030 aaPredicted RBP13.07□□□□□ -0.32
UBA52-202ENST00000442744 LMNB1P20700 586 aa13.07□□□□□ -0.32
UBA52-202ENST00000442744 RASSF7Q02833 373 aa13.07□□□□□ -0.32
UBA52-202ENST00000442744 TTC39BQ5VTQ0 682 aaPredicted RBP13.07□□□□□ -0.32
UBA52-202ENST00000442744 AGBL1Q96MI9 1066 aa13.07□□□□□ -0.32
UBA52-202ENST00000442744 COL4A3BPQ9Y5P4 624 aa13.07□□□□□ -0.32
UBA52-202ENST00000442744 BICDL2A1A5D9 508 aa13.07□□□□□ -0.32
UBA52-202ENST00000442744 PES1O00541 588 aaKnown RBP13.07□□□□□ -0.32
UBA52-202ENST00000442744 DHX8Q14562 1220 aaKnown RBP13.07□□□□□ -0.32
UBA52-202ENST00000442744 TTC30AQ86WT1 665 aa13.07□□□□□ -0.32
UBA52-202ENST00000442744 RALGAPBQ86X10 1494 aa13.07□□□□□ -0.32
UBA52-202ENST00000442744 LRPPRCP42704 1394 aaKnown RBP13.06□□□□□ -0.32
UBA52-202ENST00000442744 MKRN4PQ13434 485 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms