RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 OVOS2A0A0G2JMS6 1433 aa16.57■□□□□ 0.24
USP1-203ENST00000442679 SULT6B1Q6IMI4 303 aa16.57■□□□□ 0.24
USP1-203ENST00000442679 U2SURPO15042 1029 aaKnown RBP16.56■□□□□ 0.24
USP1-203ENST00000442679 CCDC125Q86Z20 511 aa16.56■□□□□ 0.24
USP1-203ENST00000442679 AEBP1Q8IUX7 1158 aa16.56■□□□□ 0.24
USP1-203ENST00000442679 PRKRIP1Q9H875 184 aaPredicted RBP16.56■□□□□ 0.24
USP1-203ENST00000442679 EP400Q96L91 3159 aa16.55■□□□□ 0.24
USP1-203ENST00000442679 COL3A1P02461 1466 aaPredicted RBP16.54■□□□□ 0.24
USP1-203ENST00000442679 MYBBP1AQ9BQG0 1328 aaKnown RBP16.54■□□□□ 0.24
USP1-203ENST00000442679 SPG7Q9UQ90 795 aa16.54■□□□□ 0.24
USP1-203ENST00000442679 NUDCQ9Y266 331 aa16.54■□□□□ 0.24
USP1-203ENST00000442679 TRIM37O94972 964 aa16.53■□□□□ 0.24
USP1-203ENST00000442679 HMOX1P09601 288 aa16.53■□□□□ 0.24
USP1-203ENST00000442679 SF3B2Q13435 895 aaKnown RBP16.53■□□□□ 0.24
USP1-203ENST00000442679 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.53■□□□□ 0.243e-7■■■□□ 19.2
USP1-203ENST00000442679 KDRP35968 1356 aa16.51■□□□□ 0.23
USP1-203ENST00000442679 PCDH11XQ9BZA7 1347 aa16.51■□□□□ 0.23
USP1-203ENST00000442679 PCDH11YQ9BZA8 1340 aa16.51■□□□□ 0.23
USP1-203ENST00000442679 PLEKHO1Q53GL0 409 aaPredicted RBP16.51■□□□□ 0.23
USP1-203ENST00000442679 BCL9O00512 1426 aa16.51■□□□□ 0.23
USP1-203ENST00000442679 CYP27B1O15528 508 aa16.5■□□□□ 0.23
USP1-203ENST00000442679 U2AF1L5P0DN76 240 aaPredicted RBP16.5■□□□□ 0.23
USP1-203ENST00000442679 U2AF1Q01081 240 aaKnown RBP eCLIP16.5■□□□□ 0.23
USP1-203ENST00000442679 AMOTQ4VCS5 1084 aa16.5■□□□□ 0.23
USP1-203ENST00000442679 ACSBG1Q96GR2 724 aa16.5■□□□□ 0.23
USP1-203ENST00000442679 RGPD1P0DJD0 1748 aa16.5■□□□□ 0.23
USP1-203ENST00000442679 ANP32CO43423 234 aa16.49■□□□□ 0.23
USP1-203ENST00000442679 BCL11BQ9C0K0 894 aaPredicted RBP16.49■□□□□ 0.23
USP1-203ENST00000442679 PLEKHG2Q9H7P9 1386 aa16.49■□□□□ 0.23
USP1-203ENST00000442679 APBA3O96018 575 aa16.48■□□□□ 0.23
USP1-203ENST00000442679 IFNL2Q8IZJ0 200 aa16.48■□□□□ 0.23
USP1-203ENST00000442679 KCNQ2O43526 872 aa16.47■□□□□ 0.23
USP1-203ENST00000442679 PHKG2P15735 406 aa16.47■□□□□ 0.23
USP1-203ENST00000442679 ZNF530Q6P9A1 599 aaPredicted RBP16.47■□□□□ 0.23
USP1-203ENST00000442679 PTF1AQ7RTS3 328 aa16.47■□□□□ 0.23
USP1-203ENST00000442679 BAG6P46379 1132 aa16.46■□□□□ 0.23
USP1-203ENST00000442679 DEFB132Q7Z7B7 95 aa16.46■□□□□ 0.23
USP1-203ENST00000442679 FCHSD2O94868 740 aa16.45■□□□□ 0.22
USP1-203ENST00000442679 PRIM1P49642 420 aaKnown RBP16.45■□□□□ 0.22
USP1-203ENST00000442679 NKX1-1Q15270 411 aaPredicted RBP16.45■□□□□ 0.22
USP1-203ENST00000442679 RSPH6AQ9H0K4 717 aa16.45■□□□□ 0.22
USP1-203ENST00000442679 PKD1L3Q7Z443 1732 aa16.45■□□□□ 0.22
USP1-203ENST00000442679 PRKAR2BP31323 418 aa16.44■□□□□ 0.22
USP1-203ENST00000442679 EN1Q05925 392 aaPredicted RBP16.44■□□□□ 0.22
USP1-203ENST00000442679 C1orf141Q5JVX7 400 aa16.44■□□□□ 0.22
USP1-203ENST00000442679 SYTL4Q96C24 671 aaPredicted RBP16.44■□□□□ 0.22
USP1-203ENST00000442679 SHANK3Q9BYB0 1731 aa16.44■□□□□ 0.22
USP1-203ENST00000442679 HSP90AB1P08238 724 aaKnown RBP16.43■□□□□ 0.22
USP1-203ENST00000442679 MTHFSDQ2M296 383 aaKnown RBP16.43■□□□□ 0.22
USP1-203ENST00000442679 PHACTR3Q96KR7 559 aa16.42■□□□□ 0.22
USP1-203ENST00000442679 AKAP4Q5JQC9 854 aa16.41■□□□□ 0.22
USP1-203ENST00000442679 DCAF5Q96JK2 942 aa16.41■□□□□ 0.22
USP1-203ENST00000442679 PLSCR1O15162 318 aa16.4■□□□□ 0.22
USP1-203ENST00000442679 WDR43Q15061 677 aaKnown RBP eCLIP16.4■□□□□ 0.22
USP1-203ENST00000442679 EZH2Q15910 746 aaKnown RBP16.4■□□□□ 0.22
USP1-203ENST00000442679 MPRIPQ6WCQ1 1025 aa16.4■□□□□ 0.22
USP1-203ENST00000442679 GAS2L2Q8NHY3 880 aa16.4■□□□□ 0.22
USP1-203ENST00000442679 CAMKK2Q96RR4 588 aa16.4■□□□□ 0.22
USP1-203ENST00000442679 PNNQ9H307 717 aaKnown RBP16.4■□□□□ 0.22
USP1-203ENST00000442679 TNS1Q9HBL0 1735 aaKnown RBP16.39■□□□□ 0.21
USP1-203ENST00000442679 NEFMP07197 916 aa16.39■□□□□ 0.21
USP1-203ENST00000442679 SBF2Q86WG5 1849 aa16.39■□□□□ 0.21
USP1-203ENST00000442679 NHSQ6T4R5 1651 aa16.38■□□□□ 0.21
USP1-203ENST00000442679 ERVV-2B6SEH9 535 aa16.38■□□□□ 0.21
USP1-203ENST00000442679 CCDC184Q52MB2 194 aa16.38■□□□□ 0.21
USP1-203ENST00000442679 PIGBQ92521 554 aa16.37■□□□□ 0.21
USP1-203ENST00000442679 PLEKHF1Q96S99 279 aa16.37■□□□□ 0.21
USP1-203ENST00000442679 TMOD3Q9NYL9 352 aa16.37■□□□□ 0.21
USP1-203ENST00000442679 GNAT3A8MTJ3 354 aa16.36■□□□□ 0.21
USP1-203ENST00000442679 LGR6Q9HBX8 967 aa16.36■□□□□ 0.21
USP1-203ENST00000442679 ADAMTS8Q9UP79 889 aa16.36■□□□□ 0.21
USP1-203ENST00000442679 DOT1LQ8TEK3 1739 aa16.36■□□□□ 0.21
USP1-203ENST00000442679 CABP4P57796 275 aa16.35■□□□□ 0.21
USP1-203ENST00000442679 MRS2Q9HD23 443 aa16.35■□□□□ 0.21
USP1-203ENST00000442679 KDM6AO15550 1401 aaPredicted RBP16.35■□□□□ 0.21
USP1-203ENST00000442679 RNMTO43148 476 aaKnown RBP16.34■□□□□ 0.21
USP1-203ENST00000442679 PROM2Q8N271 834 aa16.34■□□□□ 0.21
USP1-203ENST00000442679 MAPK8IP3Q9UPT6 1336 aa16.34■□□□□ 0.21
USP1-203ENST00000442679 MAP3K5Q99683 1374 aa16.34■□□□□ 0.21
USP1-203ENST00000442679 TXNRD1Q16881 649 aa16.33■□□□□ 0.2
USP1-203ENST00000442679 NFATC2IPQ8NCF5 419 aa16.33■□□□□ 0.2
USP1-203ENST00000442679 DIEXFQ68CQ4 756 aaKnown RBP16.32■□□□□ 0.2
USP1-203ENST00000442679 CCDC146Q8IYE0 955 aa16.32■□□□□ 0.2
USP1-203ENST00000442679 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
USP1-203ENST00000442679 SMARCC1Q92922 1105 aaPredicted RBP16.32■□□□□ 0.2
USP1-203ENST00000442679 TOGARAM1Q9Y4F4 1720 aa16.32■□□□□ 0.2
USP1-203ENST00000442679 BTAF1O14981 1849 aa16.31■□□□□ 0.2
USP1-203ENST00000442679 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
USP1-203ENST00000442679 PNISRQ8TF01 805 aaKnown RBP16.31■□□□□ 0.2
USP1-203ENST00000442679 RTF1Q92541 710 aaKnown RBP16.31■□□□□ 0.2
USP1-203ENST00000442679 RUNDC1Q96C34 613 aa16.31■□□□□ 0.2
USP1-203ENST00000442679 SLC52A2Q9HAB3 445 aa16.31■□□□□ 0.2
USP1-203ENST00000442679 ASAP1Q9ULH1 1129 aa16.31■□□□□ 0.2
USP1-203ENST00000442679 KAT6BQ8WYB5 2073 aa16.31■□□□□ 0.2
USP1-203ENST00000442679 HTATSF1O43719 755 aaKnown RBP16.3■□□□□ 0.2
USP1-203ENST00000442679 ATG3Q9NT62 314 aa16.3■□□□□ 0.2
USP1-203ENST00000442679 PALLDQ8WX93 1383 aa16.29■□□□□ 0.2
USP1-203ENST00000442679 TEFQ10587 303 aa16.29■□□□□ 0.2
USP1-203ENST00000442679 SLC27A3Q5K4L6 730 aa16.29■□□□□ 0.2
USP1-203ENST00000442679 NBPF14Q5TI25 921 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms