RNA–Protein interactions for RNA: ENST00000442139.5

ERGIC3-208, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-208ENST00000442139 BCL9O00512 1426 aa16.64■□□□□ 0.25
ERGIC3-208ENST00000442139 PNNQ9H307 717 aaKnown RBP16.64■□□□□ 0.25
ERGIC3-208ENST00000442139 AMOTQ4VCS5 1084 aa16.63■□□□□ 0.25
ERGIC3-208ENST00000442139 SPG7Q9UQ90 795 aa16.63■□□□□ 0.25
ERGIC3-208ENST00000442139 MEGF6O75095 1541 aa16.63■□□□□ 0.25
ERGIC3-208ENST00000442139 VIRMAQ69YN4 1812 aaKnown RBP16.63■□□□□ 0.25
ERGIC3-208ENST00000442139 FAM196AQ6ZSG2 479 aa16.62■□□□□ 0.25
ERGIC3-208ENST00000442139 ZCRB1Q8TBF4 217 aaKnown RBP16.62■□□□□ 0.25
ERGIC3-208ENST00000442139 PCDH11XQ9BZA7 1347 aa16.62■□□□□ 0.25
ERGIC3-208ENST00000442139 PCDH11YQ9BZA8 1340 aa16.62■□□□□ 0.25
ERGIC3-208ENST00000442139 SULT6B1Q6IMI4 303 aa16.61■□□□□ 0.25
ERGIC3-208ENST00000442139 CCDC125Q86Z20 511 aa16.61■□□□□ 0.25
ERGIC3-208ENST00000442139 U2SURPO15042 1029 aaKnown RBP16.6■□□□□ 0.25
ERGIC3-208ENST00000442139 NEFMP07197 916 aa16.6■□□□□ 0.25
ERGIC3-208ENST00000442139 ILDR2Q71H61 639 aa16.6■□□□□ 0.25
ERGIC3-208ENST00000442139 USHBP1Q8N6Y0 703 aa16.6■□□□□ 0.25
ERGIC3-208ENST00000442139 FCHSD2O94868 740 aa16.59■□□□□ 0.25
ERGIC3-208ENST00000442139 PLEKHO1Q53GL0 409 aaPredicted RBP16.59■□□□□ 0.25
ERGIC3-208ENST00000442139 EP400Q96L91 3159 aa16.59■□□□□ 0.25
ERGIC3-208ENST00000442139 HSP90AB1P08238 724 aaKnown RBP16.58■□□□□ 0.24
ERGIC3-208ENST00000442139 U2AF1L5P0DN76 240 aaPredicted RBP16.58■□□□□ 0.24
ERGIC3-208ENST00000442139 U2AF1Q01081 240 aaKnown RBP eCLIP16.58■□□□□ 0.24
ERGIC3-208ENST00000442139 NHSQ6T4R5 1651 aa16.58■□□□□ 0.24
ERGIC3-208ENST00000442139 RGPD3A6NKT7 1758 aaPredicted RBP16.57■□□□□ 0.24
ERGIC3-208ENST00000442139 RGPD4Q7Z3J3 1758 aa16.57■□□□□ 0.24
ERGIC3-208ENST00000442139 SCN11AQ9UI33 1791 aa16.56■□□□□ 0.24
ERGIC3-208ENST00000442139 DOT1LQ8TEK3 1739 aa16.56■□□□□ 0.24
ERGIC3-208ENST00000442139 WDR43Q15061 677 aaKnown RBP eCLIP16.56■□□□□ 0.24
ERGIC3-208ENST00000442139 ITGB4P16144 1822 aa16.56■□□□□ 0.24
ERGIC3-208ENST00000442139 IFNL2Q8IZJ0 200 aa16.55■□□□□ 0.24
ERGIC3-208ENST00000442139 TNS1Q9HBL0 1735 aaKnown RBP16.55■□□□□ 0.24
ERGIC3-208ENST00000442139 C1orf141Q5JVX7 400 aa16.54■□□□□ 0.24
ERGIC3-208ENST00000442139 DIEXFQ68CQ4 756 aaKnown RBP16.54■□□□□ 0.24
ERGIC3-208ENST00000442139 AEBP1Q8IUX7 1158 aa16.54■□□□□ 0.24
ERGIC3-208ENST00000442139 MARCH10Q8NA82 808 aaPredicted RBP16.54■□□□□ 0.24
ERGIC3-208ENST00000442139 GAS2L2Q8NHY3 880 aa16.54■□□□□ 0.24
ERGIC3-208ENST00000442139 DDX54Q8TDD1 881 aaKnown RBP16.54■□□□□ 0.24
ERGIC3-208ENST00000442139 DLG5Q8TDM6 1919 aa16.54■□□□□ 0.24
ERGIC3-208ENST00000442139 HMOX1P09601 288 aa16.53■□□□□ 0.24
ERGIC3-208ENST00000442139 SF3B2Q13435 895 aaKnown RBP16.53■□□□□ 0.24
ERGIC3-208ENST00000442139 NKX1-1Q15270 411 aaPredicted RBP16.53■□□□□ 0.24
ERGIC3-208ENST00000442139 RSPH6AQ9H0K4 717 aa16.53■□□□□ 0.24
ERGIC3-208ENST00000442139 SOCS7O14512 581 aa16.52■□□□□ 0.24
ERGIC3-208ENST00000442139 BTAF1O14981 1849 aa16.52■□□□□ 0.23
ERGIC3-208ENST00000442139 ADAMTS7Q9UKP4 1686 aa16.51■□□□□ 0.23
ERGIC3-208ENST00000442139 PRKAR2BP31323 418 aa16.51■□□□□ 0.23
ERGIC3-208ENST00000442139 AKAP4Q5JQC9 854 aa16.51■□□□□ 0.23
ERGIC3-208ENST00000442139 ZNF530Q6P9A1 599 aaPredicted RBP16.51■□□□□ 0.23
ERGIC3-208ENST00000442139 MAPK8IP3Q9UPT6 1336 aa16.5■□□□□ 0.23
ERGIC3-208ENST00000442139 PHKG2P15735 406 aa16.5■□□□□ 0.23
ERGIC3-208ENST00000442139 HMGB2P26583 209 aaKnown RBP16.5■□□□□ 0.23
ERGIC3-208ENST00000442139 MRS2Q9HD23 443 aa16.5■□□□□ 0.23
ERGIC3-208ENST00000442139 CCER2I3L3R5 266 aa16.49■□□□□ 0.23
ERGIC3-208ENST00000442139 CYP27B1O15528 508 aa16.49■□□□□ 0.23
ERGIC3-208ENST00000442139 DCAF5Q96JK2 942 aa16.49■□□□□ 0.23
ERGIC3-208ENST00000442139 BCL11BQ9C0K0 894 aaPredicted RBP16.49■□□□□ 0.23
ERGIC3-208ENST00000442139 TOGARAM1Q9Y4F4 1720 aa16.49■□□□□ 0.23
ERGIC3-208ENST00000442139 ERVV-2B6SEH9 535 aa16.47■□□□□ 0.23
ERGIC3-208ENST00000442139 HTATSF1O43719 755 aaKnown RBP16.47■□□□□ 0.23
ERGIC3-208ENST00000442139 UPF1Q92900 1129 aaKnown RBP eCLIP16.47■□□□□ 0.23
ERGIC3-208ENST00000442139 BAG6P46379 1132 aa16.46■□□□□ 0.23
ERGIC3-208ENST00000442139 MAP3K5Q99683 1374 aa16.46■□□□□ 0.23
ERGIC3-208ENST00000442139 LY75O60449 1722 aa16.45■□□□□ 0.22
ERGIC3-208ENST00000442139 GNAT3A8MTJ3 354 aa16.45■□□□□ 0.22
ERGIC3-208ENST00000442139 TRIM37O94972 964 aa16.45■□□□□ 0.22
ERGIC3-208ENST00000442139 MTHFSDQ2M296 383 aaKnown RBP16.45■□□□□ 0.22
ERGIC3-208ENST00000442139 FAM182BQ5T319 152 aa16.45■□□□□ 0.22
ERGIC3-208ENST00000442139 RUNDC1Q96C34 613 aa16.45■□□□□ 0.22
ERGIC3-208ENST00000442139 PLEKHF1Q96S99 279 aa16.45■□□□□ 0.22
ERGIC3-208ENST00000442139 SIPA1L3O60292 1781 aaPredicted RBP16.45■□□□□ 0.22
ERGIC3-208ENST00000442139 LMOD3Q0VAK6 560 aa16.44■□□□□ 0.22
ERGIC3-208ENST00000442139 PNISRQ8TF01 805 aaKnown RBP16.44■□□□□ 0.22
ERGIC3-208ENST00000442139 ADAMTS8Q9UP79 889 aa16.44■□□□□ 0.22
ERGIC3-208ENST00000442139 ZNF831Q5JPB2 1677 aa16.43■□□□□ 0.22
ERGIC3-208ENST00000442139 MRC1P22897 1456 aa16.43■□□□□ 0.22
ERGIC3-208ENST00000442139 RTF1Q92541 710 aaKnown RBP16.43■□□□□ 0.22
ERGIC3-208ENST00000442139 PLSCR1O15162 318 aa16.42■□□□□ 0.22
ERGIC3-208ENST00000442139 PRIM1P49642 420 aaKnown RBP16.42■□□□□ 0.22
ERGIC3-208ENST00000442139 PHACTR3Q96KR7 559 aa16.42■□□□□ 0.22
ERGIC3-208ENST00000442139 TMOD3Q9NYL9 352 aa16.42■□□□□ 0.22
ERGIC3-208ENST00000442139 RREB1Q92766 1687 aa16.42■□□□□ 0.22
ERGIC3-208ENST00000442139 NFE2L2Q16236 605 aa16.41■□□□□ 0.22
ERGIC3-208ENST00000442139 SMARCC1Q92922 1105 aaPredicted RBP16.41■□□□□ 0.22
ERGIC3-208ENST00000442139 KDM6AO15550 1401 aaPredicted RBP16.41■□□□□ 0.22
ERGIC3-208ENST00000442139 APBA3O96018 575 aa16.4■□□□□ 0.22
ERGIC3-208ENST00000442139 CABP4P57796 275 aa16.4■□□□□ 0.22
ERGIC3-208ENST00000442139 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
ERGIC3-208ENST00000442139 NGEFQ8N5V2 710 aa16.4■□□□□ 0.22
ERGIC3-208ENST00000442139 SYTL4Q96C24 671 aaPredicted RBP16.4■□□□□ 0.22
ERGIC3-208ENST00000442139 RNMTO43148 476 aaKnown RBP16.39■□□□□ 0.21
ERGIC3-208ENST00000442139 ACSBG1Q96GR2 724 aa16.39■□□□□ 0.21
ERGIC3-208ENST00000442139 CEMIPQ8WUJ3 1361 aa16.38■□□□□ 0.21
ERGIC3-208ENST00000442139 PAPPAQ13219 1627 aa16.38■□□□□ 0.21
ERGIC3-208ENST00000442139 MPRIPQ6WCQ1 1025 aa16.38■□□□□ 0.21
ERGIC3-208ENST00000442139 UBR2Q8IWV8 1755 aa16.37■□□□□ 0.21
ERGIC3-208ENST00000442139 KCNQ2O43526 872 aa16.37■□□□□ 0.21
ERGIC3-208ENST00000442139 TEFQ10587 303 aa16.37■□□□□ 0.21
ERGIC3-208ENST00000442139 CCDC184Q52MB2 194 aa16.37■□□□□ 0.21
ERGIC3-208ENST00000442139 SLC27A3Q5K4L6 730 aa16.37■□□□□ 0.21
ERGIC3-208ENST00000442139 SLC52A2Q9HAB3 445 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms