RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 KCNH5Q8NCM2 988 aa9.23□□□□□ -0.93
HDAC6-210ENST00000441703 FLAD1Q8NFF5 587 aa9.23□□□□□ -0.93
HDAC6-210ENST00000441703 SMC1BQ8NDV3 1235 aa9.22□□□□□ -0.93
HDAC6-210ENST00000441703 NLRP2Q9NX02 1062 aa9.22□□□□□ -0.93
HDAC6-210ENST00000441703 CICQ96RK0 1608 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-210ENST00000441703 KDM2BQ8NHM5 1336 aa9.22□□□□□ -0.93
HDAC6-210ENST00000441703 CLSPNQ9HAW4 1339 aa9.22□□□□□ -0.93
HDAC6-210ENST00000441703 HMGB2P26583 209 aaKnown RBP9.21□□□□□ -0.94
HDAC6-210ENST00000441703 SRPK2P78362 688 aaKnown RBP9.21□□□□□ -0.94
HDAC6-210ENST00000441703 ARHGAP27Q6ZUM4 889 aa9.21□□□□□ -0.94
HDAC6-210ENST00000441703 ARHGEF25Q86VW2 580 aa9.21□□□□□ -0.94
HDAC6-210ENST00000441703 DDX54Q8TDD1 881 aaKnown RBP9.21□□□□□ -0.94
HDAC6-210ENST00000441703 PLEKHG2Q9H7P9 1386 aa9.21□□□□□ -0.94
HDAC6-210ENST00000441703 BCS1LQ9Y276 419 aa9.2□□□□□ -0.94
HDAC6-210ENST00000441703 QRICH2Q9H0J4 1663 aa9.2□□□□□ -0.94
HDAC6-210ENST00000441703 RRAGCQ9HB90 399 aa9.19□□□□□ -0.94
HDAC6-210ENST00000441703 KDM2AQ9Y2K7 1162 aa9.19□□□□□ -0.94
HDAC6-210ENST00000441703 LY75O60449 1722 aa9.19□□□□□ -0.94
HDAC6-210ENST00000441703 PRIM1P49642 420 aaKnown RBP9.18□□□□□ -0.94
HDAC6-210ENST00000441703 MLLT1Q03111 559 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-210ENST00000441703 C9orf131Q5VYM1 1079 aa9.18□□□□□ -0.94
HDAC6-210ENST00000441703 USP47Q96K76 1375 aa9.18□□□□□ -0.94
HDAC6-210ENST00000441703 KIAA1210Q9ULL0 1709 aa9.18□□□□□ -0.94
HDAC6-210ENST00000441703 KCPQ6ZWJ8 1503 aa9.17□□□□□ -0.94
HDAC6-210ENST00000441703 C10orf71Q711Q0 1435 aa9.17□□□□□ -0.94
HDAC6-210ENST00000441703 ANKRD36BQ8N2N9 1353 aa9.17□□□□□ -0.94
HDAC6-210ENST00000441703 AIDAQ96BJ3 306 aa9.17□□□□□ -0.94
HDAC6-210ENST00000441703 STAC3Q96MF2 364 aa9.17□□□□□ -0.94
HDAC6-210ENST00000441703 PRDM10Q9NQV6 1147 aa9.17□□□□□ -0.94
HDAC6-210ENST00000441703 ERBB3P21860 1342 aa9.16□□□□□ -0.94
HDAC6-210ENST00000441703 FCHSD2O94868 740 aa9.16□□□□□ -0.94
HDAC6-210ENST00000441703 CCER1Q8TC90 406 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-210ENST00000441703 AK7Q96M32 723 aa9.16□□□□□ -0.94
HDAC6-210ENST00000441703 DOT1LQ8TEK3 1739 aa9.16□□□□□ -0.94
HDAC6-210ENST00000441703 PHF14O94880 888 aa9.15□□□□□ -0.94
HDAC6-210ENST00000441703 DCAF11Q8TEB1 546 aa9.15□□□□□ -0.94
HDAC6-210ENST00000441703 ANP32EQ9BTT0 268 aa9.15□□□□□ -0.94
HDAC6-210ENST00000441703 BCL11AQ9H165 835 aa9.15□□□□□ -0.94
HDAC6-210ENST00000441703 CABP2Q9NPB3 220 aa9.15□□□□□ -0.94
HDAC6-210ENST00000441703 CABP1Q9NZU7 370 aa9.15□□□□□ -0.94
HDAC6-210ENST00000441703 TNRC6CQ9HCJ0 1690 aaKnown RBP9.15□□□□□ -0.94
HDAC6-210ENST00000441703 NSD3Q9BZ95 1437 aa9.14□□□□□ -0.95
HDAC6-210ENST00000441703 C5P01031 1676 aa9.14□□□□□ -0.95
HDAC6-210ENST00000441703 ZNF316A6NFI3 1004 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-210ENST00000441703 FOXN1O15353 648 aa9.14□□□□□ -0.95
HDAC6-210ENST00000441703 CTCFP49711 727 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-210ENST00000441703 ABHD8Q96I13 439 aa9.14□□□□□ -0.95
HDAC6-210ENST00000441703 RNF181Q9P0P0 153 aa9.14□□□□□ -0.95
HDAC6-210ENST00000441703 NFAT5O94916 1531 aa9.14□□□□□ -0.95
HDAC6-210ENST00000441703 PKD1L3Q7Z443 1732 aa9.14□□□□□ -0.95
HDAC6-210ENST00000441703 PCNTO95613 3336 aa9.13□□□□□ -0.95
HDAC6-210ENST00000441703 TGFB2P61812 414 aa9.13□□□□□ -0.95
HDAC6-210ENST00000441703 ANKRD24Q8TF21 1146 aa9.13□□□□□ -0.95
HDAC6-210ENST00000441703 MKRN1Q9UHC7 482 aaKnown RBP9.13□□□□□ -0.95
HDAC6-210ENST00000441703 PXDNLA1KZ92 1463 aa9.13□□□□□ -0.95
HDAC6-210ENST00000441703 USP54Q70EL1 1684 aa9.13□□□□□ -0.95
HDAC6-210ENST00000441703 NSD2O96028 1365 aa9.12□□□□□ -0.95
HDAC6-210ENST00000441703 TTC21BQ7Z4L5 1316 aa9.12□□□□□ -0.95
HDAC6-210ENST00000441703 A0A0G2JLW4 131 aa9.12□□□□□ -0.95
HDAC6-210ENST00000441703 CCDC85CA6NKD9 419 aa9.12□□□□□ -0.95
HDAC6-210ENST00000441703 N4BP2Q86UW6 1770 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-210ENST00000441703 TTC21AQ8NDW8 1320 aa9.11□□□□□ -0.95
HDAC6-210ENST00000441703 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.11□□□□□ -0.95
HDAC6-210ENST00000441703 LTN1O94822 1766 aa9.1□□□□□ -0.95
HDAC6-210ENST00000441703 MMP10P09238 476 aa9.1□□□□□ -0.95
HDAC6-210ENST00000441703 VEGFAP15692 232 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-210ENST00000441703 ZNF692Q9BU19 519 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-210ENST00000441703 C4BP0C0L5 1744 aa9.09□□□□□ -0.95
HDAC6-210ENST00000441703 SSFA2P28290 1259 aa9.09□□□□□ -0.95
HDAC6-210ENST00000441703 LBX1P52954 281 aa9.09□□□□□ -0.95
HDAC6-210ENST00000441703 SMIM5Q71RC9 77 aa9.09□□□□□ -0.95
HDAC6-210ENST00000441703 ZCRB1Q8TBF4 217 aaKnown RBP9.09□□□□□ -0.95
HDAC6-210ENST00000441703 CFAP44Q96MT7 982 aa9.09□□□□□ -0.95
HDAC6-210ENST00000441703 CREBZFQ9NS37 354 aa9.09□□□□□ -0.95
HDAC6-210ENST00000441703 CCDC87Q9NVE4 849 aa9.09□□□□□ -0.95
HDAC6-210ENST00000441703 TAF1LQ8IZX4 1826 aa9.09□□□□□ -0.95
HDAC6-210ENST00000441703 FAM208AQ9UK61 1670 aaKnown RBP9.09□□□□□ -0.95
HDAC6-210ENST00000441703 PALLDQ8WX93 1383 aa9.09□□□□□ -0.95
HDAC6-210ENST00000441703 CENPJQ9HC77 1338 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-210ENST00000441703 DPEP1P16444 411 aa9.08□□□□□ -0.96
HDAC6-210ENST00000441703 LTV1Q96GA3 475 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-210ENST00000441703 MON2Q7Z3U7 1717 aa9.08□□□□□ -0.96
HDAC6-210ENST00000441703 KIF13BQ9NQT8 1826 aa9.08□□□□□ -0.96
HDAC6-210ENST00000441703 RGS19P49795 217 aa9.07□□□□□ -0.96
HDAC6-210ENST00000441703 SMARCC1Q92922 1105 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-210ENST00000441703 KIAA1551Q9HCM1 1747 aa9.07□□□□□ -0.96
HDAC6-210ENST00000441703 ZC3H4Q9UPT8 1303 aaKnown RBP9.06□□□□□ -0.96
HDAC6-210ENST00000441703 UBR3Q6ZT12 1888 aa9.06□□□□□ -0.96
HDAC6-210ENST00000441703 TOGARAM1Q9Y4F4 1720 aa9.06□□□□□ -0.96
HDAC6-210ENST00000441703 ARFGEF1Q9Y6D6 1849 aa9.06□□□□□ -0.96
HDAC6-210ENST00000441703 DALRD3Q5D0E6 543 aaKnown RBP9.06□□□□□ -0.96
HDAC6-210ENST00000441703 PIM2Q9P1W9 311 aa9.06□□□□□ -0.96
HDAC6-210ENST00000441703 CNTNAP1P78357 1384 aa9.05□□□□□ -0.96
HDAC6-210ENST00000441703 KTN1Q86UP2 1357 aaKnown RBP9.05□□□□□ -0.96
HDAC6-210ENST00000441703 RAB3GAP2Q9H2M9 1393 aa9.05□□□□□ -0.96
HDAC6-210ENST00000441703 GLTPD2A6NH11 291 aa9.05□□□□□ -0.96
HDAC6-210ENST00000441703 GNPATO15228 680 aa9.05□□□□□ -0.96
HDAC6-210ENST00000441703 MPRIPQ6WCQ1 1025 aa9.05□□□□□ -0.96
HDAC6-210ENST00000441703 AMIGO3Q86WK7 504 aa9.05□□□□□ -0.96
HDAC6-210ENST00000441703 DCAF5Q96JK2 942 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms