RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 DDX54Q8TDD1 881 aaKnown RBP23.33■■□□□ 1.33
COL16A1-204ENST00000440437 HSPA5P11021 654 aaKnown RBP23.32■■□□□ 1.32
COL16A1-204ENST00000440437 SPON1Q9HCB6 807 aa23.32■■□□□ 1.32
COL16A1-204ENST00000440437 PKD1L3Q7Z443 1732 aa23.32■■□□□ 1.32
COL16A1-204ENST00000440437 USHBP1Q8N6Y0 703 aa23.31■■□□□ 1.32
COL16A1-204ENST00000440437 EMILIN1Q9Y6C2 1016 aa23.31■■□□□ 1.32
COL16A1-204ENST00000440437 CGNL1Q0VF96 1302 aa23.31■■□□□ 1.32
COL16A1-204ENST00000440437 QSER1Q2KHR3 1735 aa23.3■■□□□ 1.32
COL16A1-204ENST00000440437 ZCRB1Q8TBF4 217 aaKnown RBP23.3■■□□□ 1.32
COL16A1-204ENST00000440437 NCAPD2Q15021 1401 aa23.3■■□□□ 1.32
COL16A1-204ENST00000440437 NSD2O96028 1365 aa23.29■■□□□ 1.32
COL16A1-204ENST00000440437 SLC15A2Q16348 729 aa23.29■■□□□ 1.32
COL16A1-204ENST00000440437 PDGFDQ9GZP0 370 aaPredicted RBP23.29■■□□□ 1.32
COL16A1-204ENST00000440437 STK32BQ9NY57 414 aa23.29■■□□□ 1.32
COL16A1-204ENST00000440437 TUBGCP6Q96RT7 1819 aa23.28■■□□□ 1.32
COL16A1-204ENST00000440437 TOGARAM1Q9Y4F4 1720 aa23.26■■□□□ 1.31
COL16A1-204ENST00000440437 POLR3GLQ9BT43 218 aa23.26■■□□□ 1.31
COL16A1-204ENST00000440437 RAPGEF4Q8WZA2 1011 aa23.25■■□□□ 1.31
COL16A1-204ENST00000440437 LRRC4BQ9NT99 713 aa23.25■■□□□ 1.31
COL16A1-204ENST00000440437 TATP17735 454 aaPredicted RBP23.24■■□□□ 1.31
COL16A1-204ENST00000440437 ITGB4P16144 1822 aa23.24■■□□□ 1.31
COL16A1-204ENST00000440437 PRIM1P49642 420 aaKnown RBP23.23■■□□□ 1.31
COL16A1-204ENST00000440437 WASHC2AQ641Q2 1341 aa23.23■■□□□ 1.31
COL16A1-204ENST00000440437 ZBTB7AO95365 584 aa23.21■■□□□ 1.31
COL16A1-204ENST00000440437 ZNF827Q17R98 1081 aa23.21■■□□□ 1.31
COL16A1-204ENST00000440437 SYTL4Q96C24 671 aaPredicted RBP23.21■■□□□ 1.31
COL16A1-204ENST00000440437 PPP1R1BQ9UD71 204 aaPredicted RBP23.21■■□□□ 1.31
COL16A1-204ENST00000440437 PCDH11XQ9BZA7 1347 aa23.21■■□□□ 1.31
COL16A1-204ENST00000440437 PCDH11YQ9BZA8 1340 aa23.21■■□□□ 1.31
COL16A1-204ENST00000440437 COL24A1Q17RW2 1714 aa23.2■■□□□ 1.3
COL16A1-204ENST00000440437 PTGER2P43116 358 aa23.2■■□□□ 1.3
COL16A1-204ENST00000440437 SLC27A3Q5K4L6 730 aa23.2■■□□□ 1.3
COL16A1-204ENST00000440437 POLKQ9UBT6 870 aa23.2■■□□□ 1.3
COL16A1-204ENST00000440437 PPM1GO15355 546 aaPredicted RBP23.19■■□□□ 1.3
COL16A1-204ENST00000440437 PANK3Q9H999 370 aa23.19■■□□□ 1.3
COL16A1-204ENST00000440437 AKT1S1Q96B36 256 aa23.18■■□□□ 1.3
COL16A1-204ENST00000440437 TAF1LQ8IZX4 1826 aa23.17■■□□□ 1.3
COL16A1-204ENST00000440437 C5P01031 1676 aa23.17■■□□□ 1.3
COL16A1-204ENST00000440437 CYP27B1O15528 508 aa23.16■■□□□ 1.3
COL16A1-204ENST00000440437 MTFR1LQ9H019 292 aa23.16■■□□□ 1.3
COL16A1-204ENST00000440437 ATF5Q9Y2D1 282 aaPredicted RBP23.16■■□□□ 1.3
COL16A1-204ENST00000440437 EYA1Q99502 592 aa23.15■■□□□ 1.3
COL16A1-204ENST00000440437 SGIP1Q9BQI5 828 aa23.15■■□□□ 1.3
COL16A1-204ENST00000440437 TNNT2P45379 298 aaPredicted RBP23.13■■□□□ 1.29
COL16A1-204ENST00000440437 KCNQ4P56696 695 aa23.13■■□□□ 1.29
COL16A1-204ENST00000440437 EIF4A2Q14240 407 aaKnown RBP23.12■■□□□ 1.29
COL16A1-204ENST00000440437 PLEKHG2Q9H7P9 1386 aa23.11■■□□□ 1.29
COL16A1-204ENST00000440437 PNPLA7Q6ZV29 1317 aa23.1■■□□□ 1.29
COL16A1-204ENST00000440437 CCNL1Q9UK58 526 aaPredicted RBP23.1■■□□□ 1.29
COL16A1-204ENST00000440437 NKX1-1Q15270 411 aaPredicted RBP23.09■■□□□ 1.29
COL16A1-204ENST00000440437 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.09■■□□□ 1.29
COL16A1-204ENST00000440437 IGSF1Q8N6C5 1336 aa23.08■■□□□ 1.29
COL16A1-204ENST00000440437 SPG7Q9UQ90 795 aa23.08■■□□□ 1.29
COL16A1-204ENST00000440437 PALLDQ8WX93 1383 aa23.08■■□□□ 1.29
COL16A1-204ENST00000440437 KIF7Q2M1P5 1343 aa23.08■■□□□ 1.28
COL16A1-204ENST00000440437 C4BP0C0L5 1744 aa23.06■■□□□ 1.28
COL16A1-204ENST00000440437 SLC16A10Q8TF71 515 aa23.06■■□□□ 1.28
COL16A1-204ENST00000440437 MPRIPQ6WCQ1 1025 aa23.05■■□□□ 1.28
COL16A1-204ENST00000440437 FHDC1Q9C0D6 1143 aaPredicted RBP23.05■■□□□ 1.28
COL16A1-204ENST00000440437 TFCP2L1Q9NZI6 479 aa23.05■■□□□ 1.28
COL16A1-204ENST00000440437 MORC1Q86VD1 984 aa23.04■■□□□ 1.28
COL16A1-204ENST00000440437 KNSTRNQ9Y448 316 aa23.04■■□□□ 1.28
COL16A1-204ENST00000440437 MAP3K5Q99683 1374 aa23.03■■□□□ 1.28
COL16A1-204ENST00000440437 UBR3Q6ZT12 1888 aa23.03■■□□□ 1.28
COL16A1-204ENST00000440437 PHKG2P15735 406 aa23.03■■□□□ 1.28
COL16A1-204ENST00000440437 SYT17Q9BSW7 474 aa23.03■■□□□ 1.28
COL16A1-204ENST00000440437 AMER1Q5JTC6 1135 aaPredicted RBP23.02■■□□□ 1.28
COL16A1-204ENST00000440437 PIGBQ92521 554 aa23.02■■□□□ 1.28
COL16A1-204ENST00000440437 ARXQ96QS3 562 aa23.02■■□□□ 1.28
COL16A1-204ENST00000440437 IFNL2Q8IZJ0 200 aa23.01■■□□□ 1.27
COL16A1-204ENST00000440437 SMARCC1Q92922 1105 aaPredicted RBP23■■□□□ 1.27
COL16A1-204ENST00000440437 ZNF831Q5JPB2 1677 aa22.98■■□□□ 1.27
COL16A1-204ENST00000440437 DCAF8L1A6NGE4 600 aa22.98■■□□□ 1.27
COL16A1-204ENST00000440437 COL23A1Q86Y22 540 aaPredicted RBP22.97■■□□□ 1.27
COL16A1-204ENST00000440437 HMGB2P26583 209 aaKnown RBP22.96■■□□□ 1.27
COL16A1-204ENST00000440437 TMOD3Q9NYL9 352 aa22.96■■□□□ 1.27
COL16A1-204ENST00000440437 KDRP35968 1356 aa22.96■■□□□ 1.27
COL16A1-204ENST00000440437 PER1O15534 1290 aaPredicted RBP22.95■■□□□ 1.26
COL16A1-204ENST00000440437 POLD1P28340 1107 aa22.95■■□□□ 1.26
COL16A1-204ENST00000440437 CHD4Q14839 1912 aa22.94■■□□□ 1.26
COL16A1-204ENST00000440437 KDM6AO15550 1401 aaPredicted RBP22.94■■□□□ 1.26
COL16A1-204ENST00000440437 AEBP1Q8IUX7 1158 aa22.94■■□□□ 1.26
COL16A1-204ENST00000440437 VIRMAQ69YN4 1812 aaKnown RBP22.94■■□□□ 1.26
COL16A1-204ENST00000440437 SCN11AQ9UI33 1791 aa22.94■■□□□ 1.26
COL16A1-204ENST00000440437 COL5A3P25940 1745 aaPredicted RBP22.94■■□□□ 1.26
COL16A1-204ENST00000440437 YY1P25490 414 aa22.93■■□□□ 1.26
COL16A1-204ENST00000440437 ASAP1Q9ULH1 1129 aa22.93■■□□□ 1.26
COL16A1-204ENST00000440437 LOC102724428A0A0B4J2F2 783 aa22.92■■□□□ 1.26
COL16A1-204ENST00000440437 IL13P35225 146 aa22.92■■□□□ 1.26
COL16A1-204ENST00000440437 SIK1P57059 783 aa22.92■■□□□ 1.26
COL16A1-204ENST00000440437 PLEKHO1Q53GL0 409 aaPredicted RBP22.92■■□□□ 1.26
COL16A1-204ENST00000440437 AMOTQ4VCS5 1084 aa22.91■■□□□ 1.26
COL16A1-204ENST00000440437 AMIGO3Q86WK7 504 aa22.91■■□□□ 1.26
COL16A1-204ENST00000440437 MSH5O43196 834 aa22.9■■□□□ 1.26
COL16A1-204ENST00000440437 HSP90AB1P08238 724 aaKnown RBP22.9■■□□□ 1.26
COL16A1-204ENST00000440437 ZNF530Q6P9A1 599 aaPredicted RBP22.9■■□□□ 1.26
COL16A1-204ENST00000440437 FLAD1Q8NFF5 587 aa22.9■■□□□ 1.26
COL16A1-204ENST00000440437 DCAF5Q96JK2 942 aa22.9■■□□□ 1.26
COL16A1-204ENST00000440437 ATG3Q9NT62 314 aa22.9■■□□□ 1.26
COL16A1-204ENST00000440437 ERVV-2B6SEH9 535 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms