RNA–Protein interactions for RNA: ENST00000437994.6

CD109-203, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,401 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-203ENST00000437994 CCDC158Q5M9N0 1113 aa9.42□□□□□ -0.9
CD109-203ENST00000437994 RIC3Q7Z5B4 369 aa9.42□□□□□ -0.9
CD109-203ENST00000437994 IFFO1Q0D2I5 559 aa9.42□□□□□ -0.9
CD109-203ENST00000437994 TSPYL4Q9UJ04 414 aa9.42□□□□□ -0.9
CD109-203ENST00000437994 FOXD1Q16676 465 aa9.42□□□□□ -0.9
CD109-203ENST00000437994 CCDC27Q2M243 656 aa9.42□□□□□ -0.9
CD109-203ENST00000437994 UPF3BQ9BZI7 483 aaKnown RBP9.42□□□□□ -0.9
CD109-203ENST00000437994 TUBB4AP04350 444 aa9.41□□□□□ -0.9
CD109-203ENST00000437994 K7ELQ4 463 aaPredicted RBP9.41□□□□□ -0.9
CD109-203ENST00000437994 MAP3K11Q16584 847 aa9.41□□□□□ -0.9
CD109-203ENST00000437994 BRPF1P55201 1214 aaPredicted RBP9.41□□□□□ -0.9
CD109-203ENST00000437994 CETN1Q12798 172 aa9.41□□□□□ -0.9
CD109-203ENST00000437994 ZWINTO95229 277 aa9.41□□□□□ -0.9
CD109-203ENST00000437994 CCDC172P0C7W6 258 aa9.41□□□□□ -0.9
CD109-203ENST00000437994 WDR66Q8TBY9 1149 aa9.41□□□□□ -0.9
CD109-203ENST00000437994 USO1O60763 962 aaKnown RBP9.41□□□□□ -0.9
CD109-203ENST00000437994 TSNARE1Q96NA8 513 aa9.41□□□□□ -0.9
CD109-203ENST00000437994 CCDC196A0A1B0GTZ2 297 aa9.41□□□□□ -0.9
CD109-203ENST00000437994 ZSCAN30Q86W11 494 aa9.41□□□□□ -0.9
CD109-203ENST00000437994 TANGO6Q9C0B7 1094 aa9.41□□□□□ -0.9
CD109-203ENST00000437994 NUP62CLQ9H1M0 184 aa9.41□□□□□ -0.9
CD109-203ENST00000437994 PAXBP1Q9Y5B6 917 aa9.4□□□□□ -0.9
CD109-203ENST00000437994 SOGA3Q5TF21 947 aa9.4□□□□□ -0.9
CD109-203ENST00000437994 PSME1Q06323 249 aa9.4□□□□□ -0.9
CD109-203ENST00000437994 PTPN14Q15678 1187 aa9.4□□□□□ -0.9
CD109-203ENST00000437994 SPATA32Q96LK8 384 aa9.4□□□□□ -0.9
CD109-203ENST00000437994 FAM114A2Q9NRY5 505 aa9.4□□□□□ -0.9
CD109-203ENST00000437994 TCHHQ07283 1943 aa9.4□□□□□ -0.9
CD109-203ENST00000437994 USH1CQ9Y6N9 552 aa9.4□□□□□ -0.91
CD109-203ENST00000437994 PTPN23Q9H3S7 1636 aa9.4□□□□□ -0.91
CD109-203ENST00000437994 CC2D2AQ9P2K1 1620 aa9.4□□□□□ -0.91
CD109-203ENST00000437994 GOLIM4O00461 696 aa9.4□□□□□ -0.91
CD109-203ENST00000437994 EHMT1Q9H9B1 1298 aa9.4□□□□□ -0.91
CD109-203ENST00000437994 SEC63Q9UGP8 760 aaKnown RBP9.4□□□□□ -0.91
CD109-203ENST00000437994 TTC21AQ8NDW8 1320 aa9.4□□□□□ -0.91
CD109-203ENST00000437994 EIF5P55010 431 aaKnown RBP9.4□□□□□ -0.91
CD109-203ENST00000437994 DNAJC2Q99543 621 aaKnown RBP9.4□□□□□ -0.91
CD109-203ENST00000437994 CNGA1P29973 690 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 CCDC183Q5T5S1 534 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 TTC14Q96N46 770 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 GPRASP1Q5JY77 1395 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 MROH2BQ7Z745 1585 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 DYNC1I1O14576 645 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 CCDC97Q96F63 343 aaPredicted RBP9.39□□□□□ -0.91
CD109-203ENST00000437994 SWAP70Q9UH65 585 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 FSD2A1L4K1 749 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 FMNL3Q8IVF7 1028 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 SPC24Q8NBT2 197 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 HOMER2Q9NSB8 354 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 CEP128Q6ZU80 1094 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 CEP112Q8N8E3 955 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 PNISRQ8TF01 805 aaKnown RBP9.39□□□□□ -0.91
CD109-203ENST00000437994 TTC39AQ5SRH9 613 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 LTV1Q96GA3 475 aaPredicted RBP9.39□□□□□ -0.91
CD109-203ENST00000437994 ST20-MTHFSA0A0A6YYL1 179 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 PRPHP41219 470 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 SCAND2PQ9GZW5 306 aaPredicted RBP9.39□□□□□ -0.91
CD109-203ENST00000437994 PABPN1LA6NDY0 278 aaKnown RBP9.39□□□□□ -0.91
CD109-203ENST00000437994 IKBKGQ9Y6K9 419 aa9.39□□□□□ -0.91
CD109-203ENST00000437994 NEK4P51957 841 aa9.38□□□□□ -0.91
CD109-203ENST00000437994 RAPGEF4Q8WZA2 1011 aa9.38□□□□□ -0.91
CD109-203ENST00000437994 FIBPO43427 364 aa9.38□□□□□ -0.91
CD109-203ENST00000437994 SH3BGRP55822 239 aaPredicted RBP9.38□□□□□ -0.91
CD109-203ENST00000437994 FHOD3Q2V2M9 1422 aa9.38□□□□□ -0.91
CD109-203ENST00000437994 RRP7AQ9Y3A4 280 aaKnown RBP9.38□□□□□ -0.91
CD109-203ENST00000437994 HSPA4P34932 840 aa9.38□□□□□ -0.91
CD109-203ENST00000437994 FAM193AP78312 1265 aa9.38□□□□□ -0.91
CD109-203ENST00000437994 SKIDA1Q1XH10 827 aa9.38□□□□□ -0.91
CD109-203ENST00000437994 EXOC6Q8TAG9 804 aa9.38□□□□□ -0.91
CD109-203ENST00000437994 PAFAH1B1P43034 410 aa9.38□□□□□ -0.91
CD109-203ENST00000437994 FMNL2Q96PY5 1086 aa9.38□□□□□ -0.91
CD109-203ENST00000437994 SH2B1Q9NRF2 756 aaPredicted RBP9.38□□□□□ -0.91
CD109-203ENST00000437994 TRHP20396 242 aaPredicted RBP9.38□□□□□ -0.91
CD109-203ENST00000437994 FGD6Q6ZV73 1430 aa9.38□□□□□ -0.91
CD109-203ENST00000437994 ESPNB1AK53 854 aa9.38□□□□□ -0.91
CD109-203ENST00000437994 NOL3O60936 208 aaKnown RBP9.38□□□□□ -0.91
CD109-203ENST00000437994 EIF2S2P20042 333 aaKnown RBP9.38□□□□□ -0.91
CD109-203ENST00000437994 NEUROD6Q96NK8 337 aa9.38□□□□□ -0.91
CD109-203ENST00000437994 HFM1A2PYH4 1435 aa9.38□□□□□ -0.91
CD109-203ENST00000437994 GSTTP1A0A1W2PQM5 241 aa9.38□□□□□ -0.91
CD109-203ENST00000437994 CKAP4Q07065 602 aaKnown RBP9.37□□□□□ -0.91
CD109-203ENST00000437994 ANO10Q9NW15 660 aa9.37□□□□□ -0.91
CD109-203ENST00000437994 RASAL2Q9UJF2 1139 aa9.37□□□□□ -0.91
CD109-203ENST00000437994 U3KPZ7 1027 aaPredicted RBP9.37□□□□□ -0.91
CD109-203ENST00000437994 PRPF40AO75400 957 aaKnown RBP9.37□□□□□ -0.91
CD109-203ENST00000437994 CACNA1FO60840 1977 aa9.37□□□□□ -0.91
CD109-203ENST00000437994 GTPBP4Q9BZE4 634 aaKnown RBP9.37□□□□□ -0.91
CD109-203ENST00000437994 STXBP4Q6ZWJ1 553 aa9.37□□□□□ -0.91
CD109-203ENST00000437994 KANK3Q6NY19 840 aa9.37□□□□□ -0.91
CD109-203ENST00000437994 PIBF1Q8WXW3 757 aa9.37□□□□□ -0.91
CD109-203ENST00000437994 TIAM1Q13009 1591 aa9.37□□□□□ -0.91
CD109-203ENST00000437994 MATR3P43243 847 aaKnown RBP eCLIP9.37□□□□□ -0.91
CD109-203ENST00000437994 TUBBP07437 444 aa9.37□□□□□ -0.91
CD109-203ENST00000437994 AIMP1Q12904 312 aaKnown RBP9.37□□□□□ -0.91
CD109-203ENST00000437994 PRIMPOLQ96LW4 560 aa9.37□□□□□ -0.91
CD109-203ENST00000437994 TIGD1Q96MW7 591 aa9.37□□□□□ -0.91
CD109-203ENST00000437994 A6NNZ2 444 aa9.37□□□□□ -0.91
CD109-203ENST00000437994 TUBB8Q3ZCM7 444 aa9.37□□□□□ -0.91
CD109-203ENST00000437994 LNPKQ9C0E8 428 aa9.37□□□□□ -0.91
CD109-203ENST00000437994 LARP1BQ659C4 914 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms