RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 SPG7Q9UQ90 795 aa19.58■□□□□ 0.72
SKA2-202ENST00000437036 RGPD1P0DJD0 1748 aa19.58■□□□□ 0.72
SKA2-202ENST00000437036 PLEKHG2Q9H7P9 1386 aa19.57■□□□□ 0.72
SKA2-202ENST00000437036 PLEKHO1Q53GL0 409 aaPredicted RBP19.57■□□□□ 0.72
SKA2-202ENST00000437036 ZCRB1Q8TBF4 217 aaKnown RBP19.57■□□□□ 0.72
SKA2-202ENST00000437036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.57■□□□□ 0.72
SKA2-202ENST00000437036 AMOTQ4VCS5 1084 aa19.56■□□□□ 0.72
SKA2-202ENST00000437036 OVOS2A0A0G2JMS6 1433 aa19.56■□□□□ 0.72
SKA2-202ENST00000437036 MEGF6O75095 1541 aa19.56■□□□□ 0.72
SKA2-202ENST00000437036 PRKAR2BP31323 418 aa19.55■□□□□ 0.72
SKA2-202ENST00000437036 RSPH6AQ9H0K4 717 aa19.55■□□□□ 0.72
SKA2-202ENST00000437036 RGS12O14924 1447 aa19.54■□□□□ 0.72
SKA2-202ENST00000437036 KRT27Q7Z3Y8 459 aa19.54■□□□□ 0.72
SKA2-202ENST00000437036 PNISRQ8TF01 805 aaKnown RBP19.54■□□□□ 0.72
SKA2-202ENST00000437036 ADAMTS8Q9UP79 889 aa19.54■□□□□ 0.72
SKA2-202ENST00000437036 THSD7AQ9UPZ6 1657 aa19.53■□□□□ 0.72
SKA2-202ENST00000437036 TNS2Q63HR2 1409 aa19.53■□□□□ 0.72
SKA2-202ENST00000437036 PARP4Q9UKK3 1724 aaKnown RBP19.53■□□□□ 0.72
SKA2-202ENST00000437036 MAPK8IP3Q9UPT6 1336 aa19.52■□□□□ 0.72
SKA2-202ENST00000437036 DDX54Q8TDD1 881 aaKnown RBP19.52■□□□□ 0.72
SKA2-202ENST00000437036 PCDH11XQ9BZA7 1347 aa19.51■□□□□ 0.71
SKA2-202ENST00000437036 PCDH11YQ9BZA8 1340 aa19.51■□□□□ 0.71
SKA2-202ENST00000437036 WNK3Q9BYP7 1800 aa19.51■□□□□ 0.71
SKA2-202ENST00000437036 C1orf141Q5JVX7 400 aa19.5■□□□□ 0.71
SKA2-202ENST00000437036 GAS2L2Q8NHY3 880 aa19.5■□□□□ 0.71
SKA2-202ENST00000437036 ZNF530Q6P9A1 599 aaPredicted RBP19.49■□□□□ 0.71
SKA2-202ENST00000437036 FAM9BQ8IZU0 186 aa19.49■□□□□ 0.71
SKA2-202ENST00000437036 LRRC37A3O60309 1634 aa19.48■□□□□ 0.71
SKA2-202ENST00000437036 IFNL2Q8IZJ0 200 aa19.48■□□□□ 0.71
SKA2-202ENST00000437036 RUNDC1Q96C34 613 aa19.48■□□□□ 0.71
SKA2-202ENST00000437036 HSP90AB1P08238 724 aaKnown RBP19.47■□□□□ 0.71
SKA2-202ENST00000437036 MTHFSDQ2M296 383 aaKnown RBP19.47■□□□□ 0.71
SKA2-202ENST00000437036 MARCH10Q8NA82 808 aaPredicted RBP19.47■□□□□ 0.71
SKA2-202ENST00000437036 PHACTR3Q96KR7 559 aa19.47■□□□□ 0.71
SKA2-202ENST00000437036 PLEKHF1Q96S99 279 aa19.47■□□□□ 0.71
SKA2-202ENST00000437036 CCDC146Q8IYE0 955 aa19.46■□□□□ 0.71
SKA2-202ENST00000437036 CYP27B1O15528 508 aa19.45■□□□□ 0.7
SKA2-202ENST00000437036 PHKG2P15735 406 aa19.45■□□□□ 0.7
SKA2-202ENST00000437036 AKAP4Q5JQC9 854 aa19.45■□□□□ 0.7
SKA2-202ENST00000437036 FAM196AQ6ZSG2 479 aa19.45■□□□□ 0.7
SKA2-202ENST00000437036 PKD1L3Q7Z443 1732 aa19.44■□□□□ 0.7
SKA2-202ENST00000437036 NFE2L2Q16236 605 aa19.43■□□□□ 0.7
SKA2-202ENST00000437036 GNAT3A8MTJ3 354 aa19.42■□□□□ 0.7
SKA2-202ENST00000437036 NKX1-1Q15270 411 aaPredicted RBP19.42■□□□□ 0.7
SKA2-202ENST00000437036 FAM182BQ5T319 152 aa19.42■□□□□ 0.7
SKA2-202ENST00000437036 RTF1Q92541 710 aaKnown RBP19.42■□□□□ 0.7
SKA2-202ENST00000437036 BRWD3Q6RI45 1802 aa19.41■□□□□ 0.7
SKA2-202ENST00000437036 DCAF5Q96JK2 942 aa19.41■□□□□ 0.7
SKA2-202ENST00000437036 MAP3K5Q99683 1374 aa19.4■□□□□ 0.7
SKA2-202ENST00000437036 BCL9O00512 1426 aa19.4■□□□□ 0.7
SKA2-202ENST00000437036 HTATSF1O43719 755 aaKnown RBP19.39■□□□□ 0.69
SKA2-202ENST00000437036 TMPOP42166 694 aaKnown RBP19.39■□□□□ 0.69
SKA2-202ENST00000437036 LMOD3Q0VAK6 560 aa19.39■□□□□ 0.69
SKA2-202ENST00000437036 APAF1O14727 1248 aa19.38■□□□□ 0.69
SKA2-202ENST00000437036 RIPK4P57078 832 aa19.38■□□□□ 0.69
SKA2-202ENST00000437036 MPRIPQ6WCQ1 1025 aa19.38■□□□□ 0.69
SKA2-202ENST00000437036 ILDR2Q71H61 639 aa19.37■□□□□ 0.69
SKA2-202ENST00000437036 SHANK3Q9BYB0 1731 aa19.37■□□□□ 0.69
SKA2-202ENST00000437036 ERVV-2B6SEH9 535 aa19.36■□□□□ 0.69
SKA2-202ENST00000437036 NEUROD2Q15784 382 aa19.36■□□□□ 0.69
SKA2-202ENST00000437036 SYTL4Q96C24 671 aaPredicted RBP19.36■□□□□ 0.69
SKA2-202ENST00000437036 ACSBG1Q96GR2 724 aa19.36■□□□□ 0.69
SKA2-202ENST00000437036 RRP7AQ9Y3A4 280 aaKnown RBP19.36■□□□□ 0.69
SKA2-202ENST00000437036 RNMTO43148 476 aaKnown RBP19.35■□□□□ 0.69
SKA2-202ENST00000437036 CABP4P57796 275 aa19.35■□□□□ 0.69
SKA2-202ENST00000437036 PRIM1P49642 420 aaKnown RBP19.34■□□□□ 0.69
SKA2-202ENST00000437036 BCL11BQ9C0K0 894 aaPredicted RBP19.34■□□□□ 0.69
SKA2-202ENST00000437036 TRIM37O94972 964 aa19.33■□□□□ 0.68
SKA2-202ENST00000437036 TEFQ10587 303 aa19.33■□□□□ 0.68
SKA2-202ENST00000437036 SF3B2Q13435 895 aaKnown RBP19.33■□□□□ 0.68
SKA2-202ENST00000437036 NGEFQ8N5V2 710 aa19.33■□□□□ 0.68
SKA2-202ENST00000437036 LGR6Q9HBX8 967 aa19.33■□□□□ 0.68
SKA2-202ENST00000437036 TMOD3Q9NYL9 352 aa19.33■□□□□ 0.68
SKA2-202ENST00000437036 NCBP3Q53F19 620 aaKnown RBP19.32■□□□□ 0.68
SKA2-202ENST00000437036 IL17REQ8NFR9 667 aa19.32■□□□□ 0.68
SKA2-202ENST00000437036 KDM6AO15550 1401 aaPredicted RBP19.32■□□□□ 0.68
SKA2-202ENST00000437036 MCM10Q7L590 875 aa19.31■□□□□ 0.68
SKA2-202ENST00000437036 CCDC125Q86Z20 511 aa19.31■□□□□ 0.68
SKA2-202ENST00000437036 KCNQ2O43526 872 aa19.3■□□□□ 0.68
SKA2-202ENST00000437036 DCTN1Q14203 1278 aa19.3■□□□□ 0.68
SKA2-202ENST00000437036 SLC52A2Q9HAB3 445 aa19.3■□□□□ 0.68
SKA2-202ENST00000437036 KAT6BQ8WYB5 2073 aa19.29■□□□□ 0.68
SKA2-202ENST00000437036 CALD1Q05682 793 aaKnown RBP19.29■□□□□ 0.68
SKA2-202ENST00000437036 NFATC2IPQ8NCF5 419 aa19.29■□□□□ 0.68
SKA2-202ENST00000437036 CEMIPQ8WUJ3 1361 aa19.29■□□□□ 0.68
SKA2-202ENST00000437036 CCDC27Q2M243 656 aa19.28■□□□□ 0.68
SKA2-202ENST00000437036 PIGBQ92521 554 aa19.28■□□□□ 0.68
SKA2-202ENST00000437036 TRIM35Q9UPQ4 493 aa19.28■□□□□ 0.68
SKA2-202ENST00000437036 SALL2Q9Y467 1007 aaPredicted RBP19.27■□□□□ 0.68
SKA2-202ENST00000437036 DOT1LQ8TEK3 1739 aa19.26■□□□□ 0.67
SKA2-202ENST00000437036 SENP3-EIF4A1A0A087X0R7 540 aa19.26■□□□□ 0.67
SKA2-202ENST00000437036 APBA3O96018 575 aa19.26■□□□□ 0.67
SKA2-202ENST00000437036 TAF7Q15545 349 aaPredicted RBP19.26■□□□□ 0.67
SKA2-202ENST00000437036 SMARCC1Q92922 1105 aaPredicted RBP19.26■□□□□ 0.67
SKA2-202ENST00000437036 SCN11AQ9UI33 1791 aa19.25■□□□□ 0.67
SKA2-202ENST00000437036 NHSQ6T4R5 1651 aa19.25■□□□□ 0.67
SKA2-202ENST00000437036 THUMPD2Q9BTF0 503 aaKnown RBP19.25■□□□□ 0.67
SKA2-202ENST00000437036 EP400Q96L91 3159 aa19.24■□□□□ 0.67
SKA2-202ENST00000437036 DLG5Q8TDM6 1919 aa19.24■□□□□ 0.67
SKA2-202ENST00000437036 SBF2Q86WG5 1849 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms