RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 CADPS2Q86UW7 1296 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 STK11IPQ8N1F8 1099 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 CHCHD4Q8N4Q1 142 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 TMC1Q8TDI8 760 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 SNRNP27Q8WVK2 155 aaKnown RBP6.48□□□□□ -1.37
CAST-209ENST00000437034 KCNB2Q92953 911 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 NAP1L4Q99733 375 aaKnown RBP6.48□□□□□ -1.37
CAST-209ENST00000437034 BCL2L13Q9BXK5 485 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 CWC25Q9NXE8 425 aaPredicted RBP6.48□□□□□ -1.37
CAST-209ENST00000437034 FANCD2Q9BXW9 1451 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 NBPF7P0C2Y1 421 aaPredicted RBP6.48□□□□□ -1.37
CAST-209ENST00000437034 PEX19P40855 299 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 CD151P48509 253 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 FNBP4Q8N3X1 1017 aaPredicted RBP6.48□□□□□ -1.37
CAST-209ENST00000437034 PHC3Q8NDX5 983 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 UHMK1Q8TAS1 419 aaKnown RBP6.48□□□□□ -1.37
CAST-209ENST00000437034 DDX27Q96GQ7 796 aaKnown RBP6.48□□□□□ -1.37
CAST-209ENST00000437034 FMNL2Q96PY5 1086 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 TSPYL1Q9H0U9 437 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 EFCC1Q9HA90 598 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 CHCHD3Q9NX63 227 aaKnown RBP6.48□□□□□ -1.37
CAST-209ENST00000437034 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.48□□□□□ -1.37
CAST-209ENST00000437034 GOLGA6L6A8MZA4 724 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 TGFB3P10600 412 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 GTF2A1P52655 376 aaPredicted RBP6.48□□□□□ -1.37
CAST-209ENST00000437034 MTERF4Q7Z6M4 381 aaKnown RBP6.48□□□□□ -1.37
CAST-209ENST00000437034 C8orf37Q96NL8 207 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 USP25Q9UHP3 1055 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 HTATSF1O43719 755 aaKnown RBP6.47□□□□□ -1.37
CAST-209ENST00000437034 ARMC3Q5W041 872 aa6.47□□□□□ -1.37
CAST-209ENST00000437034 LMBRD2Q68DH5 695 aaPredicted RBP6.47□□□□□ -1.37
CAST-209ENST00000437034 CEP89Q96ST8 783 aa6.47□□□□□ -1.37
CAST-209ENST00000437034 IP6K2Q9UHH9 426 aa6.47□□□□□ -1.37
CAST-209ENST00000437034 HDAC9Q9UKV0 1011 aa6.47□□□□□ -1.37
CAST-209ENST00000437034 CCP110O43303 1012 aa6.47□□□□□ -1.37
CAST-209ENST00000437034 KIF1CO43896 1103 aaKnown RBP6.47□□□□□ -1.37
CAST-209ENST00000437034 KIF5CO60282 957 aa6.47□□□□□ -1.37
CAST-209ENST00000437034 ZNF396Q96N95 335 aaPredicted RBP6.47□□□□□ -1.37
CAST-209ENST00000437034 CUX2O14529 1486 aa6.47□□□□□ -1.37
CAST-209ENST00000437034 BICDL2A1A5D9 508 aa6.46□□□□□ -1.37
CAST-209ENST00000437034 H0YHG0 523 aa6.46□□□□□ -1.37
CAST-209ENST00000437034 ECEL1O95672 775 aa6.46□□□□□ -1.37
CAST-209ENST00000437034 CLCN1P35523 988 aa6.46□□□□□ -1.37
CAST-209ENST00000437034 SARNPP82979 210 aaKnown RBP6.46□□□□□ -1.37
CAST-209ENST00000437034 TOMM20Q15388 145 aa6.46□□□□□ -1.37
CAST-209ENST00000437034 EGFLAMQ63HQ2 1017 aa6.46□□□□□ -1.37
CAST-209ENST00000437034 NLGN1Q8N2Q7 840 aa6.46□□□□□ -1.37
CAST-209ENST00000437034 ATF5Q9Y2D1 282 aaPredicted RBP6.46□□□□□ -1.37
CAST-209ENST00000437034 SLC4A2P04920 1241 aa6.46□□□□□ -1.38
CAST-209ENST00000437034 SKILP12757 684 aa6.46□□□□□ -1.38
CAST-209ENST00000437034 ZSCAN20P17040 1043 aaPredicted RBP6.46□□□□□ -1.38
CAST-209ENST00000437034 PDAP1Q13442 181 aaKnown RBP6.46□□□□□ -1.38
CAST-209ENST00000437034 SAFB2Q14151 953 aaKnown RBP eCLIP6.46□□□□□ -1.38
CAST-209ENST00000437034 POLA2Q14181 598 aa6.46□□□□□ -1.38
CAST-209ENST00000437034 CDC37Q16543 378 aaPredicted RBP6.46□□□□□ -1.38
CAST-209ENST00000437034 TTC39BQ5VTQ0 682 aaPredicted RBP6.46□□□□□ -1.38
CAST-209ENST00000437034 DRC7Q8IY82 874 aa6.46□□□□□ -1.38
CAST-209ENST00000437034 MUC3BQ9H195 1237 aa6.46□□□□□ -1.38
CAST-209ENST00000437034 CHMP3Q9Y3E7 222 aa6.46□□□□□ -1.38
CAST-209ENST00000437034 DDX49Q9Y6V7 483 aaKnown RBP6.46□□□□□ -1.38
CAST-209ENST00000437034 KIF16BQ96L93 1317 aa6.46□□□□□ -1.38
CAST-209ENST00000437034 CEP164Q9UPV0 1460 aa6.46□□□□□ -1.38
CAST-209ENST00000437034 C1QBPQ07021 282 aaKnown RBP6.46□□□□□ -1.38
CAST-209ENST00000437034 KCTD2Q14681 263 aa6.46□□□□□ -1.38
CAST-209ENST00000437034 NT5DC4Q86YG4 428 aa6.46□□□□□ -1.38
CAST-209ENST00000437034 MIER1Q8N108 512 aa6.46□□□□□ -1.38
CAST-209ENST00000437034 IL17RAQ96F46 866 aa6.46□□□□□ -1.38
CAST-209ENST00000437034 NOL10Q9BSC4 688 aaKnown RBP6.46□□□□□ -1.38
CAST-209ENST00000437034 SPC25Q9HBM1 224 aa6.46□□□□□ -1.38
CAST-209ENST00000437034 RABL2AQ9UBK7 228 aaPredicted RBP6.46□□□□□ -1.38
CAST-209ENST00000437034 MAP3K1Q13233 1512 aa6.46□□□□□ -1.38
CAST-209ENST00000437034 WRNQ14191 1432 aaPredicted RBP eCLIP6.45□□□□□ -1.38
CAST-209ENST00000437034 ITGAEP38570 1179 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 DHX8Q14562 1220 aaKnown RBP6.45□□□□□ -1.38
CAST-209ENST00000437034 ZNF394Q53GI3 561 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 DNAJC21Q5F1R6 531 aaKnown RBP6.45□□□□□ -1.38
CAST-209ENST00000437034 SDE2Q6IQ49 451 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 JDP2Q8WYK2 163 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 ZNF512BQ96KM6 892 aaPredicted RBP6.45□□□□□ -1.38
CAST-209ENST00000437034 RNF39Q9H2S5 420 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 DONSONQ9NYP3 566 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 TRIM64CA6NLI5 447 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 TRIM66O15016 1216 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 NPHP1O15259 732 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 S100BP04271 92 aaPredicted RBP6.45□□□□□ -1.38
CAST-209ENST00000437034 SETSIPP0DME0 302 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 XBP1P17861 261 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 TCEAL1Q15170 157 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 C10orf62Q5T681 223 aaPredicted RBP6.45□□□□□ -1.38
CAST-209ENST00000437034 KANK3Q6NY19 840 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 ERCC4Q92889 916 aaPredicted RBP6.45□□□□□ -1.38
CAST-209ENST00000437034 CEP63Q96MT8 703 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 TANGO6Q9C0B7 1094 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 RETREG1Q9H6L5 497 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 EIF4G3O43432 1585 aaKnown RBP6.45□□□□□ -1.38
CAST-209ENST00000437034 PDS5BQ9NTI5 1447 aa6.45□□□□□ -1.38
CAST-209ENST00000437034 KLHL33A6NCF5 533 aa6.44□□□□□ -1.38
CAST-209ENST00000437034 CAND2O75155 1236 aa6.44□□□□□ -1.38
CAST-209ENST00000437034 CCDC15Q0P6D6 951 aa6.44□□□□□ -1.38
CAST-209ENST00000437034 INF2Q27J81 1249 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms