RNA–Protein interactions for RNA: ENST00000436493.2

SDHAP3-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene SDHAP3, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-201ENST00000436493 ACSBG1Q96GR2 724 aa29.18■■■□□ 2.26
SDHAP3-201ENST00000436493 NPC1L1Q9UHC9 1359 aa29.17■■■□□ 2.26
SDHAP3-201ENST00000436493 PTF1AQ7RTS3 328 aa29.17■■■□□ 2.26
SDHAP3-201ENST00000436493 KAT6BQ8WYB5 2073 aa29.16■■■□□ 2.26
SDHAP3-201ENST00000436493 KCNQ2O43526 872 aa29.15■■■□□ 2.26
SDHAP3-201ENST00000436493 PLSCR1O15162 318 aa29.14■■■□□ 2.26
SDHAP3-201ENST00000436493 NCAPD2Q15021 1401 aa29.12■■■□□ 2.25
SDHAP3-201ENST00000436493 ZEB1P37275 1124 aaPredicted RBP29.12■■■□□ 2.25
SDHAP3-201ENST00000436493 MTHFSP49914 203 aa29.12■■■□□ 2.25
SDHAP3-201ENST00000436493 PCDH11XQ9BZA7 1347 aa29.11■■■□□ 2.25
SDHAP3-201ENST00000436493 PCDH11YQ9BZA8 1340 aa29.11■■■□□ 2.25
SDHAP3-201ENST00000436493 SPG7Q9UQ90 795 aa29.09■■■□□ 2.25
SDHAP3-201ENST00000436493 NHSQ6T4R5 1651 aa29.09■■■□□ 2.25
SDHAP3-201ENST00000436493 IGSF1Q8N6C5 1336 aa29.08■■■□□ 2.25
SDHAP3-201ENST00000436493 NBPF14Q5TI25 921 aa29.07■■■□□ 2.24
SDHAP3-201ENST00000436493 SYTL4Q96C24 671 aaPredicted RBP29.07■■■□□ 2.24
SDHAP3-201ENST00000436493 SHANK3Q9BYB0 1731 aa29.07■■■□□ 2.24
SDHAP3-201ENST00000436493 PSDA5PKW4 1024 aaPredicted RBP29.05■■■□□ 2.24
SDHAP3-201ENST00000436493 PRIM1P49642 420 aaKnown RBP29.05■■■□□ 2.24
SDHAP3-201ENST00000436493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.05■■■□□ 2.245e-6■□□□□ 8.5
SDHAP3-201ENST00000436493 RREB1Q92766 1687 aa29.04■■■□□ 2.24
SDHAP3-201ENST00000436493 RGPD3A6NKT7 1758 aaPredicted RBP29.03■■■□□ 2.24
SDHAP3-201ENST00000436493 RGPD4Q7Z3J3 1758 aa29.03■■■□□ 2.24
SDHAP3-201ENST00000436493 CYP27B1O15528 508 aa29.03■■■□□ 2.24
SDHAP3-201ENST00000436493 IL13P35225 146 aa29.03■■■□□ 2.24
SDHAP3-201ENST00000436493 R3HDM1Q15032 1099 aaKnown RBP29.03■■■□□ 2.24
SDHAP3-201ENST00000436493 TXNRD1Q16881 649 aa29.01■■■□□ 2.23
SDHAP3-201ENST00000436493 PKD1L3Q7Z443 1732 aa29■■■□□ 2.23
SDHAP3-201ENST00000436493 NUP188Q5SRE5 1749 aa29■■■□□ 2.23
SDHAP3-201ENST00000436493 BTAF1O14981 1849 aa28.99■■■□□ 2.23
SDHAP3-201ENST00000436493 DIAPH1O60610 1272 aaKnown RBP28.99■■■□□ 2.23
SDHAP3-201ENST00000436493 SULT6B1Q6IMI4 303 aa28.99■■■□□ 2.23
SDHAP3-201ENST00000436493 PROM2Q8N271 834 aa28.99■■■□□ 2.23
SDHAP3-201ENST00000436493 DOT1LQ8TEK3 1739 aa28.99■■■□□ 2.23
SDHAP3-201ENST00000436493 PLEKHG2Q9H7P9 1386 aa28.99■■■□□ 2.23
SDHAP3-201ENST00000436493 PLEKHO1Q53GL0 409 aaPredicted RBP28.98■■■□□ 2.23
SDHAP3-201ENST00000436493 AEBP1Q8IUX7 1158 aa28.97■■■□□ 2.23
SDHAP3-201ENST00000436493 IFNL2Q8IZJ0 200 aa28.97■■■□□ 2.23
SDHAP3-201ENST00000436493 NKX1-1Q15270 411 aaPredicted RBP28.95■■■□□ 2.22
SDHAP3-201ENST00000436493 AMOTQ4VCS5 1084 aa28.95■■■□□ 2.22
SDHAP3-201ENST00000436493 PHKG2P15735 406 aa28.94■■■□□ 2.22
SDHAP3-201ENST00000436493 CFAP53Q96M91 514 aa28.94■■■□□ 2.22
SDHAP3-201ENST00000436493 KDRP35968 1356 aa28.91■■■□□ 2.22
SDHAP3-201ENST00000436493 PPP2R1AP30153 589 aa28.91■■■□□ 2.22
SDHAP3-201ENST00000436493 DDX10Q13206 875 aaKnown RBP28.91■■■□□ 2.22
SDHAP3-201ENST00000436493 MPRIPQ6WCQ1 1025 aa28.91■■■□□ 2.22
SDHAP3-201ENST00000436493 HMOX1P09601 288 aa28.9■■■□□ 2.22
SDHAP3-201ENST00000436493 ZNF530Q6P9A1 599 aaPredicted RBP28.9■■■□□ 2.22
SDHAP3-201ENST00000436493 STK32BQ9NY57 414 aa28.9■■■□□ 2.22
SDHAP3-201ENST00000436493 U2SURPO15042 1029 aaKnown RBP28.89■■■□□ 2.22
SDHAP3-201ENST00000436493 HSP90AB1P08238 724 aaKnown RBP28.89■■■□□ 2.22
SDHAP3-201ENST00000436493 SLC27A3Q5K4L6 730 aa28.89■■■□□ 2.22
SDHAP3-201ENST00000436493 ANO8Q9HCE9 1232 aaPredicted RBP28.88■■■□□ 2.21
SDHAP3-201ENST00000436493 C1orf141Q5JVX7 400 aa28.87■■■□□ 2.21
SDHAP3-201ENST00000436493 COL3A1P02461 1466 aaPredicted RBP28.85■■■□□ 2.21
SDHAP3-201ENST00000436493 TMOD3Q9NYL9 352 aa28.85■■■□□ 2.21
SDHAP3-201ENST00000436493 DCAF5Q96JK2 942 aa28.84■■■□□ 2.21
SDHAP3-201ENST00000436493 LRRC4BQ9NT99 713 aa28.84■■■□□ 2.21
SDHAP3-201ENST00000436493 NUDCQ9Y266 331 aa28.84■■■□□ 2.21
SDHAP3-201ENST00000436493 SLC15A2Q16348 729 aa28.83■■■□□ 2.21
SDHAP3-201ENST00000436493 PIGBQ92521 554 aa28.83■■■□□ 2.21
SDHAP3-201ENST00000436493 SMARCC1Q92922 1105 aaPredicted RBP28.83■■■□□ 2.21
SDHAP3-201ENST00000436493 TOGARAM1Q9Y4F4 1720 aa28.83■■■□□ 2.21
SDHAP3-201ENST00000436493 CCNL1Q9UK58 526 aaPredicted RBP28.82■■■□□ 2.2
SDHAP3-201ENST00000436493 ITGB4P16144 1822 aa28.82■■■□□ 2.2
SDHAP3-201ENST00000436493 ERVV-2B6SEH9 535 aa28.8■■■□□ 2.2
SDHAP3-201ENST00000436493 PALLDQ8WX93 1383 aa28.79■■■□□ 2.2
SDHAP3-201ENST00000436493 KCNQ4P56696 695 aa28.79■■■□□ 2.2
SDHAP3-201ENST00000436493 LY75O60449 1722 aa28.78■■■□□ 2.2
SDHAP3-201ENST00000436493 HMGB2P26583 209 aaKnown RBP28.77■■■□□ 2.2
SDHAP3-201ENST00000436493 AKAP4Q5JQC9 854 aa28.77■■■□□ 2.2
SDHAP3-201ENST00000436493 CABP4P57796 275 aa28.76■■■□□ 2.19
SDHAP3-201ENST00000436493 RALBP1Q15311 655 aa28.76■■■□□ 2.19
SDHAP3-201ENST00000436493 U2AF1L5P0DN76 240 aaPredicted RBP28.74■■■□□ 2.19
SDHAP3-201ENST00000436493 U2AF1Q01081 240 aaKnown RBP eCLIP28.74■■■□□ 2.19
SDHAP3-201ENST00000436493 PAPPAQ13219 1627 aa28.73■■■□□ 2.19
SDHAP3-201ENST00000436493 KDM6AO15550 1401 aaPredicted RBP28.73■■■□□ 2.19
SDHAP3-201ENST00000436493 ZNF827Q17R98 1081 aa28.73■■■□□ 2.19
SDHAP3-201ENST00000436493 MTHFSDQ2M296 383 aaKnown RBP28.73■■■□□ 2.19
SDHAP3-201ENST00000436493 AKT1S1Q96B36 256 aa28.73■■■□□ 2.19
SDHAP3-201ENST00000436493 ASAP1Q9ULH1 1129 aa28.73■■■□□ 2.19
SDHAP3-201ENST00000436493 LRP5O75197 1615 aa28.72■■■□□ 2.19
SDHAP3-201ENST00000436493 SPON1Q9HCB6 807 aa28.71■■■□□ 2.19
SDHAP3-201ENST00000436493 ATG3Q9NT62 314 aa28.7■■■□□ 2.18
SDHAP3-201ENST00000436493 TFCP2L1Q9NZI6 479 aa28.7■■■□□ 2.18
SDHAP3-201ENST00000436493 PRKAR2BP31323 418 aa28.69■■■□□ 2.18
SDHAP3-201ENST00000436493 GAS2L2Q8NHY3 880 aa28.69■■■□□ 2.18
SDHAP3-201ENST00000436493 PDGFDQ9GZP0 370 aaPredicted RBP28.69■■■□□ 2.18
SDHAP3-201ENST00000436493 LOC102724428A0A0B4J2F2 783 aa28.68■■■□□ 2.18
SDHAP3-201ENST00000436493 SIK1P57059 783 aa28.68■■■□□ 2.18
SDHAP3-201ENST00000436493 NFATC2IPQ8NCF5 419 aa28.68■■■□□ 2.18
SDHAP3-201ENST00000436493 RSPH6AQ9H0K4 717 aa28.68■■■□□ 2.18
SDHAP3-201ENST00000436493 FCHSD2O94868 740 aa28.67■■■□□ 2.18
SDHAP3-201ENST00000436493 RNMTO43148 476 aaKnown RBP28.66■■■□□ 2.18
SDHAP3-201ENST00000436493 ZBTB7AO95365 584 aa28.66■■■□□ 2.18
SDHAP3-201ENST00000436493 LGR6Q9HBX8 967 aa28.66■■■□□ 2.18
SDHAP3-201ENST00000436493 CASZ1Q86V15 1759 aa28.65■■■□□ 2.18
SDHAP3-201ENST00000436493 ATP6V1AP38606 617 aa28.64■■■□□ 2.18
SDHAP3-201ENST00000436493 RBM42Q9BTD8 480 aaKnown RBP28.64■■■□□ 2.18
SDHAP3-201ENST00000436493 SCN11AQ9UI33 1791 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms