RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 TRIM35Q9UPQ4 493 aa28.02■■■□□ 2.08
YBX1-203ENST00000436427 DLG5Q8TDM6 1919 aa28.01■■■□□ 2.08
YBX1-203ENST00000436427 ZNF521Q96K83 1311 aa28.01■■■□□ 2.07
YBX1-203ENST00000436427 USP21Q9UK80 565 aa28.01■■■□□ 2.07
YBX1-203ENST00000436427 IL2RBP14784 551 aa28■■■□□ 2.07
YBX1-203ENST00000436427 LMOD3Q0VAK6 560 aa28■■■□□ 2.07
YBX1-203ENST00000436427 PHF23Q9BUL5 403 aaPredicted RBP28■■■□□ 2.07
YBX1-203ENST00000436427 PARP4Q9UKK3 1724 aaKnown RBP28■■■□□ 2.07
YBX1-203ENST00000436427 AFF2P51816 1311 aa27.98■■■□□ 2.07
YBX1-203ENST00000436427 SPATA31A1Q5TZJ5 1347 aa27.98■■■□□ 2.07
YBX1-203ENST00000436427 OVOS2A0A0G2JMS6 1433 aa27.98■■■□□ 2.07
YBX1-203ENST00000436427 ZNF530Q6P9A1 599 aaPredicted RBP27.97■■■□□ 2.07
YBX1-203ENST00000436427 PLEKHG2Q9H7P9 1386 aa27.97■■■□□ 2.07
YBX1-203ENST00000436427 GOLGA2Q08379 1002 aa27.97■■■□□ 2.07
YBX1-203ENST00000436427 PDE3BQ13370 1112 aa27.97■■■□□ 2.07
YBX1-203ENST00000436427 SPG7Q9UQ90 795 aa27.97■■■□□ 2.07
YBX1-203ENST00000436427 SPATA31A5Q5VU36 1347 aa27.97■■■□□ 2.07
YBX1-203ENST00000436427 SPATA31A7Q8IWB4 1347 aa27.97■■■□□ 2.07
YBX1-203ENST00000436427 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.96■■■□□ 2.07
YBX1-203ENST00000436427 GNAT3A8MTJ3 354 aa27.95■■■□□ 2.06
YBX1-203ENST00000436427 VPS72Q15906 364 aa27.95■■■□□ 2.06
YBX1-203ENST00000436427 RTF1Q92541 710 aaKnown RBP27.95■■■□□ 2.06
YBX1-203ENST00000436427 CDCA7LQ96GN5 454 aa27.95■■■□□ 2.06
YBX1-203ENST00000436427 MAP3K5Q99683 1374 aa27.95■■■□□ 2.06
YBX1-203ENST00000436427 C1orf141Q5JVX7 400 aa27.94■■■□□ 2.06
YBX1-203ENST00000436427 WDR63Q8IWG1 891 aa27.94■■■□□ 2.06
YBX1-203ENST00000436427 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.94■■■□□ 2.065e-12■□□□□ 11.2
YBX1-203ENST00000436427 PKD1L3Q7Z443 1732 aa27.94■■■□□ 2.06
YBX1-203ENST00000436427 DCTN1Q14203 1278 aa27.93■■■□□ 2.06
YBX1-203ENST00000436427 THRAP3Q9Y2W1 955 aaKnown RBP27.93■■■□□ 2.06
YBX1-203ENST00000436427 AKAP4Q5JQC9 854 aa27.92■■■□□ 2.06
YBX1-203ENST00000436427 MCM10Q7L590 875 aa27.92■■■□□ 2.06
YBX1-203ENST00000436427 THUMPD2Q9BTF0 503 aaKnown RBP27.92■■■□□ 2.06
YBX1-203ENST00000436427 ZCRB1Q8TBF4 217 aaKnown RBP27.92■■■□□ 2.06
YBX1-203ENST00000436427 WNK3Q9BYP7 1800 aa27.91■■■□□ 2.06
YBX1-203ENST00000436427 DISP2A7MBM2 1401 aa27.91■■■□□ 2.06
YBX1-203ENST00000436427 HTATSF1O43719 755 aaKnown RBP27.9■■■□□ 2.06
YBX1-203ENST00000436427 CALD1Q05682 793 aaKnown RBP27.89■■■□□ 2.06
YBX1-203ENST00000436427 E9PSI1 815 aa27.88■■■□□ 2.05
YBX1-203ENST00000436427 SPINK5Q9NQ38 1064 aaPredicted RBP27.88■■■□□ 2.05
YBX1-203ENST00000436427 PCDH11XQ9BZA7 1347 aa27.88■■■□□ 2.05
YBX1-203ENST00000436427 PCDH11YQ9BZA8 1340 aa27.88■■■□□ 2.05
YBX1-203ENST00000436427 SLFN5Q08AF3 891 aa27.87■■■□□ 2.05
YBX1-203ENST00000436427 IFNL2Q8IZJ0 200 aa27.87■■■□□ 2.05
YBX1-203ENST00000436427 CDCA7Q9BWT1 371 aaPredicted RBP27.87■■■□□ 2.05
YBX1-203ENST00000436427 PHKG2P15735 406 aa27.87■■■□□ 2.05
YBX1-203ENST00000436427 BARGINQ6ZT62 677 aa27.86■■■□□ 2.05
YBX1-203ENST00000436427 TRPC5Q9UL62 973 aaPredicted RBP27.86■■■□□ 2.05
YBX1-203ENST00000436427 IL16Q14005 1332 aa27.85■■■□□ 2.05
YBX1-203ENST00000436427 CYP27B1O15528 508 aa27.85■■■□□ 2.05
YBX1-203ENST00000436427 MPRIPQ6WCQ1 1025 aa27.85■■■□□ 2.05
YBX1-203ENST00000436427 LAS1LQ9Y4W2 734 aaKnown RBP27.85■■■□□ 2.05
YBX1-203ENST00000436427 ATRNO75882 1429 aa27.84■■■□□ 2.05
YBX1-203ENST00000436427 FAM98CQ17RN3 349 aaKnown RBP27.84■■■□□ 2.05
YBX1-203ENST00000436427 DDX54Q8TDD1 881 aaKnown RBP27.84■■■□□ 2.05
YBX1-203ENST00000436427 SHANK3Q9BYB0 1731 aa27.83■■■□□ 2.05
YBX1-203ENST00000436427 IL17REQ8NFR9 667 aa27.83■■■□□ 2.05
YBX1-203ENST00000436427 EXOC5O00471 708 aa27.82■■■□□ 2.04
YBX1-203ENST00000436427 MYH16Q9H6N6 1097 aa27.82■■■□□ 2.04
YBX1-203ENST00000436427 GJD4Q96KN9 370 aaPredicted RBP27.82■■■□□ 2.04
YBX1-203ENST00000436427 LGR6Q9HBX8 967 aa27.82■■■□□ 2.04
YBX1-203ENST00000436427 DUSP27Q5VZP5 1158 aa27.81■■■□□ 2.04
YBX1-203ENST00000436427 QTRT2Q9H974 415 aaKnown RBP27.81■■■□□ 2.04
YBX1-203ENST00000436427 LRRC37A3O60309 1634 aa27.81■■■□□ 2.04
YBX1-203ENST00000436427 TNS2Q63HR2 1409 aa27.81■■■□□ 2.04
YBX1-203ENST00000436427 RNMTO43148 476 aaKnown RBP27.8■■■□□ 2.04
YBX1-203ENST00000436427 HSP90AB1P08238 724 aaKnown RBP27.8■■■□□ 2.04
YBX1-203ENST00000436427 GNAI1P63096 354 aa27.8■■■□□ 2.04
YBX1-203ENST00000436427 DDB1Q16531 1140 aa27.8■■■□□ 2.04
YBX1-203ENST00000436427 TRMT2AQ8IZ69 625 aaKnown RBP27.8■■■□□ 2.04
YBX1-203ENST00000436427 IFT57Q9NWB7 429 aa27.8■■■□□ 2.04
YBX1-203ENST00000436427 CEMIPQ8WUJ3 1361 aa27.79■■■□□ 2.04
YBX1-203ENST00000436427 A0A0G2JS52 829 aa27.79■■■□□ 2.04
YBX1-203ENST00000436427 MYT1Q01538 1121 aa27.79■■■□□ 2.04
YBX1-203ENST00000436427 GLI3P10071 1580 aa27.79■■■□□ 2.04
YBX1-203ENST00000436427 TSR2Q969E8 191 aaKnown RBP27.78■■■□□ 2.04
YBX1-203ENST00000436427 VIRMAQ69YN4 1812 aaKnown RBP27.78■■■□□ 2.04
YBX1-203ENST00000436427 ZNF772Q68DY9 489 aaPredicted RBP27.77■■■□□ 2.04
YBX1-203ENST00000436427 DCAF5Q96JK2 942 aa27.77■■■□□ 2.04
YBX1-203ENST00000436427 CFAP44Q96MT7 982 aa27.77■■■□□ 2.04
YBX1-203ENST00000436427 FANCIQ9NVI1 1328 aa27.77■■■□□ 2.04
YBX1-203ENST00000436427 KDM6AO15550 1401 aaPredicted RBP27.77■■■□□ 2.04
YBX1-203ENST00000436427 TEFQ10587 303 aa27.77■■■□□ 2.04
YBX1-203ENST00000436427 ADAMTS7Q9UKP4 1686 aa27.75■■■□□ 2.03
YBX1-203ENST00000436427 ZNF853P0CG23 659 aa27.75■■■□□ 2.03
YBX1-203ENST00000436427 SCN11AQ9UI33 1791 aa27.75■■■□□ 2.03
YBX1-203ENST00000436427 GTF3C3Q9Y5Q9 886 aa27.74■■■□□ 2.03
YBX1-203ENST00000436427 MBIPQ9NS73 344 aa27.73■■■□□ 2.03
YBX1-203ENST00000436427 NKX1-1Q15270 411 aaPredicted RBP27.72■■■□□ 2.03
YBX1-203ENST00000436427 TAF7Q15545 349 aaPredicted RBP27.72■■■□□ 2.03
YBX1-203ENST00000436427 MIS18AQ9NYP9 233 aa27.72■■■□□ 2.03
YBX1-203ENST00000436427 THSD7AQ9UPZ6 1657 aa27.72■■■□□ 2.03
YBX1-203ENST00000436427 TSPYL4Q9UJ04 414 aa27.72■■■□□ 2.03
YBX1-203ENST00000436427 CHL1O00533 1208 aa27.71■■■□□ 2.03
YBX1-203ENST00000436427 SLC52A2Q9HAB3 445 aa27.69■■■□□ 2.02
YBX1-203ENST00000436427 CABP4P57796 275 aa27.67■■■□□ 2.02
YBX1-203ENST00000436427 EXOSC9Q06265 439 aaKnown RBP27.67■■■□□ 2.02
YBX1-203ENST00000436427 BTBD11A6QL63 1104 aa27.67■■■□□ 2.02
YBX1-203ENST00000436427 MARCH10Q8NA82 808 aaPredicted RBP27.67■■■□□ 2.02
YBX1-203ENST00000436427 NFATC2IPQ8NCF5 419 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms