RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 CDCA8Q53HL2 280 aa19.02■□□□□ 0.64
PTPN7-203ENST00000435759 SLC27A3Q5K4L6 730 aa19.01■□□□□ 0.63
PTPN7-203ENST00000435759 EMILIN1Q9Y6C2 1016 aa19.01■□□□□ 0.63
PTPN7-203ENST00000435759 NSD2O96028 1365 aa19.01■□□□□ 0.63
PTPN7-203ENST00000435759 DCAF8L1A6NGE4 600 aa19■□□□□ 0.63
PTPN7-203ENST00000435759 ARXQ96QS3 562 aa19■□□□□ 0.63
PTPN7-203ENST00000435759 KAT6BQ8WYB5 2073 aa18.99■□□□□ 0.63
PTPN7-203ENST00000435759 TATP17735 454 aaPredicted RBP18.99■□□□□ 0.63
PTPN7-203ENST00000435759 RAPGEF4Q8WZA2 1011 aa18.99■□□□□ 0.63
PTPN7-203ENST00000435759 TIMELESSQ9UNS1 1208 aa18.99■□□□□ 0.63
PTPN7-203ENST00000435759 RTL1A6NKG5 1358 aa18.98■□□□□ 0.63
PTPN7-203ENST00000435759 INSRP06213 1382 aa18.98■□□□□ 0.63
PTPN7-203ENST00000435759 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
PTPN7-203ENST00000435759 TFCP2L1Q9NZI6 479 aa18.98■□□□□ 0.63
PTPN7-203ENST00000435759 PNPLA7Q6ZV29 1317 aa18.98■□□□□ 0.63
PTPN7-203ENST00000435759 BTAF1O14981 1849 aa18.97■□□□□ 0.63
PTPN7-203ENST00000435759 POLR3GLQ9BT43 218 aa18.97■□□□□ 0.63
PTPN7-203ENST00000435759 FAM208AQ9UK61 1670 aaKnown RBP18.96■□□□□ 0.63
PTPN7-203ENST00000435759 CYP27B1O15528 508 aa18.96■□□□□ 0.63
PTPN7-203ENST00000435759 CCNL1Q9UK58 526 aaPredicted RBP18.96■□□□□ 0.63
PTPN7-203ENST00000435759 NSD3Q9BZ95 1437 aa18.96■□□□□ 0.63
PTPN7-203ENST00000435759 RGPD2P0DJD1 1756 aa18.96■□□□□ 0.63
PTPN7-203ENST00000435759 PAPPAQ13219 1627 aa18.95■□□□□ 0.62
PTPN7-203ENST00000435759 CGNL1Q0VF96 1302 aa18.95■□□□□ 0.62
PTPN7-203ENST00000435759 MYOM1P52179 1685 aa18.95■□□□□ 0.62
PTPN7-203ENST00000435759 FLT4P35916 1363 aa18.93■□□□□ 0.62
PTPN7-203ENST00000435759 MPRIPQ6WCQ1 1025 aa18.93■□□□□ 0.62
PTPN7-203ENST00000435759 TNNT2P45379 298 aaPredicted RBP18.92■□□□□ 0.62
PTPN7-203ENST00000435759 COL23A1Q86Y22 540 aaPredicted RBP18.92■□□□□ 0.62
PTPN7-203ENST00000435759 SLC16A10Q8TF71 515 aa18.92■□□□□ 0.62
PTPN7-203ENST00000435759 POLKQ9UBT6 870 aa18.92■□□□□ 0.62
PTPN7-203ENST00000435759 EYA1Q99502 592 aa18.91■□□□□ 0.62
PTPN7-203ENST00000435759 WASHC2AQ641Q2 1341 aa18.91■□□□□ 0.62
PTPN7-203ENST00000435759 SMG6Q86US8 1419 aaKnown RBP18.91■□□□□ 0.62
PTPN7-203ENST00000435759 MSH5O43196 834 aa18.9■□□□□ 0.62
PTPN7-203ENST00000435759 HSPA5P11021 654 aaKnown RBP18.9■□□□□ 0.62
PTPN7-203ENST00000435759 GOLGB1Q14789 3259 aaKnown RBP18.89■□□□□ 0.62
PTPN7-203ENST00000435759 SMIM5Q71RC9 77 aa18.89■□□□□ 0.61
PTPN7-203ENST00000435759 KLHL34Q8N239 644 aa18.89■□□□□ 0.61
PTPN7-203ENST00000435759 KIF24Q5T7B8 1368 aa18.89■□□□□ 0.61
PTPN7-203ENST00000435759 PIGBQ92521 554 aa18.88■□□□□ 0.61
PTPN7-203ENST00000435759 PCDH11XQ9BZA7 1347 aa18.88■□□□□ 0.61
PTPN7-203ENST00000435759 PCDH11YQ9BZA8 1340 aa18.88■□□□□ 0.61
PTPN7-203ENST00000435759 CLSPNQ9HAW4 1339 aa18.88■□□□□ 0.61
PTPN7-203ENST00000435759 SHANK3Q9BYB0 1731 aa18.88■□□□□ 0.61
PTPN7-203ENST00000435759 POLD1P28340 1107 aa18.87■□□□□ 0.61
PTPN7-203ENST00000435759 NLGN2Q8NFZ4 835 aa18.87■□□□□ 0.61
PTPN7-203ENST00000435759 PANK3Q9H999 370 aa18.87■□□□□ 0.61
PTPN7-203ENST00000435759 NKX1-1Q15270 411 aaPredicted RBP18.86■□□□□ 0.61
PTPN7-203ENST00000435759 MSL1Q68DK7 614 aa18.86■□□□□ 0.61
PTPN7-203ENST00000435759 AMIGO3Q86WK7 504 aa18.86■□□□□ 0.61
PTPN7-203ENST00000435759 EIF4G2P78344 907 aaKnown RBP eCLIP18.85■□□□□ 0.61
PTPN7-203ENST00000435759 EIF4A2Q14240 407 aaKnown RBP18.85■□□□□ 0.61
PTPN7-203ENST00000435759 GPR162Q16538 588 aa18.85■□□□□ 0.61
PTPN7-203ENST00000435759 ZNF784Q8NCA9 323 aaPredicted RBP18.85■□□□□ 0.61
PTPN7-203ENST00000435759 DOT1LQ8TEK3 1739 aa18.85■□□□□ 0.61
PTPN7-203ENST00000435759 MAP3K5Q99683 1374 aa18.84■□□□□ 0.61
PTPN7-203ENST00000435759 SPG7Q9UQ90 795 aa18.84■□□□□ 0.61
PTPN7-203ENST00000435759 PALLDQ8WX93 1383 aa18.83■□□□□ 0.61
PTPN7-203ENST00000435759 PELP1Q8IZL8 1130 aaKnown RBP18.82■□□□□ 0.6
PTPN7-203ENST00000435759 CCER1Q8TC90 406 aaPredicted RBP18.82■□□□□ 0.6
PTPN7-203ENST00000435759 ASAP1Q9ULH1 1129 aa18.82■□□□□ 0.6
PTPN7-203ENST00000435759 PHKG2P15735 406 aa18.81■□□□□ 0.6
PTPN7-203ENST00000435759 NCAPD2Q15021 1401 aa18.81■□□□□ 0.6
PTPN7-203ENST00000435759 KIF20BQ96Q89 1820 aa18.81■□□□□ 0.6
PTPN7-203ENST00000435759 SMARCC1Q92922 1105 aaPredicted RBP18.8■□□□□ 0.6
PTPN7-203ENST00000435759 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.8■□□□□ 0.6
PTPN7-203ENST00000435759 LY75O60449 1722 aa18.8■□□□□ 0.6
PTPN7-203ENST00000435759 IFNL2Q8IZJ0 200 aa18.79■□□□□ 0.6
PTPN7-203ENST00000435759 LINC00116Q8NCU8 138 aa18.78■□□□□ 0.6
PTPN7-203ENST00000435759 ATG3Q9NT62 314 aa18.78■□□□□ 0.6
PTPN7-203ENST00000435759 LOC102724428A0A0B4J2F2 783 aa18.77■□□□□ 0.6
PTPN7-203ENST00000435759 PHF14O94880 888 aa18.77■□□□□ 0.6
PTPN7-203ENST00000435759 YBX3P16989 372 aaKnown RBP eCLIP18.77■□□□□ 0.63e-8■□□□□ 10.5
PTPN7-203ENST00000435759 SIK1P57059 783 aa18.77■□□□□ 0.6
PTPN7-203ENST00000435759 ITPK1Q13572 414 aa18.77■□□□□ 0.6
PTPN7-203ENST00000435759 TMOD3Q9NYL9 352 aa18.77■□□□□ 0.6
PTPN7-203ENST00000435759 AK7Q96M32 723 aa18.76■□□□□ 0.59
PTPN7-203ENST00000435759 TUBGCP6Q96RT7 1819 aa18.75■□□□□ 0.59
PTPN7-203ENST00000435759 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.75■□□□□ 0.59
PTPN7-203ENST00000435759 MORC1Q86VD1 984 aa18.75■□□□□ 0.59
PTPN7-203ENST00000435759 FLAD1Q8NFF5 587 aa18.75■□□□□ 0.59
PTPN7-203ENST00000435759 ATP6V1AP38606 617 aa18.74■□□□□ 0.59
PTPN7-203ENST00000435759 AEBP1Q8IUX7 1158 aa18.74■□□□□ 0.59
PTPN7-203ENST00000435759 SLC4A9Q96Q91 983 aa18.74■□□□□ 0.59
PTPN7-203ENST00000435759 IGSF1Q8N6C5 1336 aa18.74■□□□□ 0.59
PTPN7-203ENST00000435759 QSER1Q2KHR3 1735 aa18.73■□□□□ 0.59
PTPN7-203ENST00000435759 MAP2P11137 1827 aaKnown RBP18.72■□□□□ 0.59
PTPN7-203ENST00000435759 TOGARAM1Q9Y4F4 1720 aa18.72■□□□□ 0.59
PTPN7-203ENST00000435759 COL24A1Q17RW2 1714 aa18.71■□□□□ 0.59
PTPN7-203ENST00000435759 PLEKHO1Q53GL0 409 aaPredicted RBP18.71■□□□□ 0.59
PTPN7-203ENST00000435759 CD2APQ9Y5K6 639 aa18.71■□□□□ 0.59
PTPN7-203ENST00000435759 PKD1L3Q7Z443 1732 aa18.69■□□□□ 0.58
PTPN7-203ENST00000435759 ERVV-2B6SEH9 535 aa18.69■□□□□ 0.58
PTPN7-203ENST00000435759 GNPATO15228 680 aa18.69■□□□□ 0.58
PTPN7-203ENST00000435759 HMGB2P26583 209 aaKnown RBP18.69■□□□□ 0.58
PTPN7-203ENST00000435759 ZNF530Q6P9A1 599 aaPredicted RBP18.69■□□□□ 0.58
PTPN7-203ENST00000435759 RBM42Q9BTD8 480 aaKnown RBP18.69■□□□□ 0.58
PTPN7-203ENST00000435759 WWC3Q9ULE0 1092 aa18.69■□□□□ 0.58
PTPN7-203ENST00000435759 KNSTRNQ9Y448 316 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 323.7 ms