RNA–Protein interactions for RNA: ENST00000435527.6

CLOCK-203, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-203ENST00000435527 PARD3Q8TEW0 1356 aa24.7■■□□□ 1.55
CLOCK-203ENST00000435527 CC2D1BQ5T0F9 858 aaKnown RBP24.7■■□□□ 1.54
CLOCK-203ENST00000435527 ACSBG1Q96GR2 724 aa24.7■■□□□ 1.54
CLOCK-203ENST00000435527 NCAPD2Q15021 1401 aa24.69■■□□□ 1.54
CLOCK-203ENST00000435527 NPC1L1Q9UHC9 1359 aa24.68■■□□□ 1.54
CLOCK-203ENST00000435527 PROM2Q8N271 834 aa24.66■■□□□ 1.54
CLOCK-203ENST00000435527 MTHFSP49914 203 aa24.64■■□□□ 1.54
CLOCK-203ENST00000435527 IGSF1Q8N6C5 1336 aa24.62■■□□□ 1.53
CLOCK-203ENST00000435527 PSDA5PKW4 1024 aaPredicted RBP24.61■■□□□ 1.53
CLOCK-203ENST00000435527 CYP27B1O15528 508 aa24.61■■□□□ 1.53
CLOCK-203ENST00000435527 IL13P35225 146 aa24.61■■□□□ 1.53
CLOCK-203ENST00000435527 PRIM1P49642 420 aaKnown RBP24.61■■□□□ 1.53
CLOCK-203ENST00000435527 CNGB1Q14028 1251 aaPredicted RBP24.61■■□□□ 1.53
CLOCK-203ENST00000435527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.6■■□□□ 1.537e-7■■■■□ 19.5
CLOCK-203ENST00000435527 SHANK3Q9BYB0 1731 aa24.59■■□□□ 1.53
CLOCK-203ENST00000435527 R3HDM1Q15032 1099 aaKnown RBP24.59■■□□□ 1.53
CLOCK-203ENST00000435527 PCDH11XQ9BZA7 1347 aa24.59■■□□□ 1.53
CLOCK-203ENST00000435527 PCDH11YQ9BZA8 1340 aa24.59■■□□□ 1.53
CLOCK-203ENST00000435527 TXNRD1Q16881 649 aa24.58■■□□□ 1.53
CLOCK-203ENST00000435527 SPG7Q9UQ90 795 aa24.58■■□□□ 1.53
CLOCK-203ENST00000435527 NHSQ6T4R5 1651 aa24.57■■□□□ 1.52
CLOCK-203ENST00000435527 NBPF14Q5TI25 921 aa24.57■■□□□ 1.52
CLOCK-203ENST00000435527 RREB1Q92766 1687 aa24.56■■□□□ 1.52
CLOCK-203ENST00000435527 NKX1-1Q15270 411 aaPredicted RBP24.56■■□□□ 1.52
CLOCK-203ENST00000435527 SYTL4Q96C24 671 aaPredicted RBP24.55■■□□□ 1.52
CLOCK-203ENST00000435527 KAT6BQ8WYB5 2073 aa24.55■■□□□ 1.52
CLOCK-203ENST00000435527 AEBP1Q8IUX7 1158 aa24.54■■□□□ 1.52
CLOCK-203ENST00000435527 RGPD3A6NKT7 1758 aaPredicted RBP24.54■■□□□ 1.52
CLOCK-203ENST00000435527 RGPD4Q7Z3J3 1758 aa24.54■■□□□ 1.52
CLOCK-203ENST00000435527 SULT6B1Q6IMI4 303 aa24.52■■□□□ 1.52
CLOCK-203ENST00000435527 PLEKHG2Q9H7P9 1386 aa24.52■■□□□ 1.52
CLOCK-203ENST00000435527 NUP188Q5SRE5 1749 aa24.52■■□□□ 1.52
CLOCK-203ENST00000435527 IFNL2Q8IZJ0 200 aa24.51■■□□□ 1.51
CLOCK-203ENST00000435527 PKD1L3Q7Z443 1732 aa24.5■■□□□ 1.51
CLOCK-203ENST00000435527 DIAPH1O60610 1272 aaKnown RBP24.5■■□□□ 1.51
CLOCK-203ENST00000435527 PHKG2P15735 406 aa24.5■■□□□ 1.51
CLOCK-203ENST00000435527 ANO8Q9HCE9 1232 aaPredicted RBP24.5■■□□□ 1.51
CLOCK-203ENST00000435527 ZEB1P37275 1124 aaPredicted RBP24.49■■□□□ 1.51
CLOCK-203ENST00000435527 PLEKHO1Q53GL0 409 aaPredicted RBP24.49■■□□□ 1.51
CLOCK-203ENST00000435527 KDRP35968 1356 aa24.49■■□□□ 1.51
CLOCK-203ENST00000435527 BTAF1O14981 1849 aa24.49■■□□□ 1.51
CLOCK-203ENST00000435527 LRRC4BQ9NT99 713 aa24.48■■□□□ 1.51
CLOCK-203ENST00000435527 AMOTQ4VCS5 1084 aa24.47■■□□□ 1.51
CLOCK-203ENST00000435527 PPP2R1AP30153 589 aa24.46■■□□□ 1.51
CLOCK-203ENST00000435527 DOT1LQ8TEK3 1739 aa24.46■■□□□ 1.51
CLOCK-203ENST00000435527 MPRIPQ6WCQ1 1025 aa24.45■■□□□ 1.5
CLOCK-203ENST00000435527 SLC27A3Q5K4L6 730 aa24.44■■□□□ 1.5
CLOCK-203ENST00000435527 PIGBQ92521 554 aa24.44■■□□□ 1.5
CLOCK-203ENST00000435527 SRCAPQ6ZRS2 3230 aa24.43■■□□□ 1.5
CLOCK-203ENST00000435527 HMOX1P09601 288 aa24.43■■□□□ 1.5
CLOCK-203ENST00000435527 SLC15A2Q16348 729 aa24.43■■□□□ 1.5
CLOCK-203ENST00000435527 COL3A1P02461 1466 aaPredicted RBP24.43■■□□□ 1.5
CLOCK-203ENST00000435527 DDX10Q13206 875 aaKnown RBP24.42■■□□□ 1.5
CLOCK-203ENST00000435527 ZNF530Q6P9A1 599 aaPredicted RBP24.42■■□□□ 1.5
CLOCK-203ENST00000435527 STK32BQ9NY57 414 aa24.42■■□□□ 1.5
CLOCK-203ENST00000435527 KCNQ4P56696 695 aa24.41■■□□□ 1.5
CLOCK-203ENST00000435527 HSP90AB1P08238 724 aaKnown RBP24.39■■□□□ 1.49
CLOCK-203ENST00000435527 DCAF5Q96JK2 942 aa24.39■■□□□ 1.49
CLOCK-203ENST00000435527 CFAP53Q96M91 514 aa24.39■■□□□ 1.49
CLOCK-203ENST00000435527 ERVV-2B6SEH9 535 aa24.38■■□□□ 1.49
CLOCK-203ENST00000435527 U2SURPO15042 1029 aaKnown RBP24.38■■□□□ 1.49
CLOCK-203ENST00000435527 AKT1S1Q96B36 256 aa24.38■■□□□ 1.49
CLOCK-203ENST00000435527 PDGFDQ9GZP0 370 aaPredicted RBP24.38■■□□□ 1.49
CLOCK-203ENST00000435527 TOGARAM1Q9Y4F4 1720 aa24.38■■□□□ 1.49
CLOCK-203ENST00000435527 CCNL1Q9UK58 526 aaPredicted RBP24.37■■□□□ 1.49
CLOCK-203ENST00000435527 ZNF827Q17R98 1081 aa24.36■■□□□ 1.49
CLOCK-203ENST00000435527 C1orf141Q5JVX7 400 aa24.36■■□□□ 1.49
CLOCK-203ENST00000435527 SMARCC1Q92922 1105 aaPredicted RBP24.36■■□□□ 1.49
CLOCK-203ENST00000435527 TMOD3Q9NYL9 352 aa24.36■■□□□ 1.49
CLOCK-203ENST00000435527 PALLDQ8WX93 1383 aa24.35■■□□□ 1.49
CLOCK-203ENST00000435527 ITGB4P16144 1822 aa24.34■■□□□ 1.49
CLOCK-203ENST00000435527 MTHFSDQ2M296 383 aaKnown RBP24.34■■□□□ 1.49
CLOCK-203ENST00000435527 AKAP4Q5JQC9 854 aa24.34■■□□□ 1.49
CLOCK-203ENST00000435527 ASAP1Q9ULH1 1129 aa24.34■■□□□ 1.49
CLOCK-203ENST00000435527 LY75O60449 1722 aa24.34■■□□□ 1.49
CLOCK-203ENST00000435527 PAPPAQ13219 1627 aa24.34■■□□□ 1.49
CLOCK-203ENST00000435527 ATG3Q9NT62 314 aa24.33■■□□□ 1.49
CLOCK-203ENST00000435527 KDM6AO15550 1401 aaPredicted RBP24.33■■□□□ 1.49
CLOCK-203ENST00000435527 NUDCQ9Y266 331 aa24.32■■□□□ 1.48
CLOCK-203ENST00000435527 CABP4P57796 275 aa24.3■■□□□ 1.48
CLOCK-203ENST00000435527 SPON1Q9HCB6 807 aa24.3■■□□□ 1.48
CLOCK-203ENST00000435527 LRP5O75197 1615 aa24.3■■□□□ 1.48
CLOCK-203ENST00000435527 RALBP1Q15311 655 aa24.29■■□□□ 1.48
CLOCK-203ENST00000435527 LGR6Q9HBX8 967 aa24.29■■□□□ 1.48
CLOCK-203ENST00000435527 NFATC2IPQ8NCF5 419 aa24.28■■□□□ 1.48
CLOCK-203ENST00000435527 RSPH6AQ9H0K4 717 aa24.28■■□□□ 1.48
CLOCK-203ENST00000435527 LOC102724428A0A0B4J2F2 783 aa24.27■■□□□ 1.48
CLOCK-203ENST00000435527 ZBTB7AO95365 584 aa24.27■■□□□ 1.48
CLOCK-203ENST00000435527 U2AF1L5P0DN76 240 aaPredicted RBP24.27■■□□□ 1.48
CLOCK-203ENST00000435527 HMGB2P26583 209 aaKnown RBP24.27■■□□□ 1.48
CLOCK-203ENST00000435527 SIK1P57059 783 aa24.27■■□□□ 1.48
CLOCK-203ENST00000435527 U2AF1Q01081 240 aaKnown RBP eCLIP24.27■■□□□ 1.48
CLOCK-203ENST00000435527 PHACTR3Q96KR7 559 aa24.27■■□□□ 1.48
CLOCK-203ENST00000435527 TFCP2L1Q9NZI6 479 aa24.27■■□□□ 1.48
CLOCK-203ENST00000435527 RNMTO43148 476 aaKnown RBP24.26■■□□□ 1.47
CLOCK-203ENST00000435527 CASZ1Q86V15 1759 aa24.26■■□□□ 1.47
CLOCK-203ENST00000435527 FCHSD2O94868 740 aa24.25■■□□□ 1.47
CLOCK-203ENST00000435527 PRKAR2BP31323 418 aa24.25■■□□□ 1.47
CLOCK-203ENST00000435527 PNPLA7Q6ZV29 1317 aa24.25■■□□□ 1.47
CLOCK-203ENST00000435527 ATF5Q9Y2D1 282 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms