RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 STK32BQ9NY57 414 aa27.94■■■□□ 2.06
HLA-B-250ENST00000434333 ANKRD26Q9UPS8 1709 aa27.94■■■□□ 2.06
HLA-B-250ENST00000434333 ZCRB1Q8TBF4 217 aaKnown RBP27.93■■■□□ 2.06
HLA-B-250ENST00000434333 EMILIN1Q9Y6C2 1016 aa27.92■■■□□ 2.06
HLA-B-250ENST00000434333 CCER1Q8TC90 406 aaPredicted RBP27.91■■■□□ 2.06
HLA-B-250ENST00000434333 NSD2O96028 1365 aa27.9■■■□□ 2.06
HLA-B-250ENST00000434333 LRRC4BQ9NT99 713 aa27.9■■■□□ 2.06
HLA-B-250ENST00000434333 HSPA5P11021 654 aaKnown RBP27.89■■■□□ 2.06
HLA-B-250ENST00000434333 EIF4G2P78344 907 aaKnown RBP eCLIP27.88■■■□□ 2.05
HLA-B-250ENST00000434333 CGNL1Q0VF96 1302 aa27.88■■■□□ 2.05
HLA-B-250ENST00000434333 ZBTB7AO95365 584 aa27.87■■■□□ 2.05
HLA-B-250ENST00000434333 PRIM1P49642 420 aaKnown RBP27.87■■■□□ 2.05
HLA-B-250ENST00000434333 NCAPD2Q15021 1401 aa27.86■■■□□ 2.05
HLA-B-250ENST00000434333 RAPGEF4Q8WZA2 1011 aa27.86■■■□□ 2.05
HLA-B-250ENST00000434333 PPP1R1BQ9UD71 204 aaPredicted RBP27.86■■■□□ 2.05
HLA-B-250ENST00000434333 LY75O60449 1722 aa27.85■■■□□ 2.05
HLA-B-250ENST00000434333 PTGER2P43116 358 aa27.85■■■□□ 2.05
HLA-B-250ENST00000434333 ZNF827Q17R98 1081 aa27.85■■■□□ 2.05
HLA-B-250ENST00000434333 POLR3GLQ9BT43 218 aa27.85■■■□□ 2.05
HLA-B-250ENST00000434333 MAP2P11137 1827 aaKnown RBP27.84■■■□□ 2.05
HLA-B-250ENST00000434333 SYTL4Q96C24 671 aaPredicted RBP27.84■■■□□ 2.05
HLA-B-250ENST00000434333 TATP17735 454 aaPredicted RBP27.83■■■□□ 2.05
HLA-B-250ENST00000434333 ATF5Q9Y2D1 282 aaPredicted RBP27.82■■■□□ 2.04
HLA-B-250ENST00000434333 PKD1L3Q7Z443 1732 aa27.81■■■□□ 2.04
HLA-B-250ENST00000434333 SLC27A3Q5K4L6 730 aa27.81■■■□□ 2.04
HLA-B-250ENST00000434333 WASHC2AQ641Q2 1341 aa27.81■■■□□ 2.04
HLA-B-250ENST00000434333 AKT1S1Q96B36 256 aa27.8■■■□□ 2.04
HLA-B-250ENST00000434333 QSER1Q2KHR3 1735 aa27.79■■■□□ 2.04
HLA-B-250ENST00000434333 PPM1GO15355 546 aaPredicted RBP27.79■■■□□ 2.04
HLA-B-250ENST00000434333 SGIP1Q9BQI5 828 aa27.79■■■□□ 2.04
HLA-B-250ENST00000434333 MTFR1LQ9H019 292 aa27.79■■■□□ 2.04
HLA-B-250ENST00000434333 POLKQ9UBT6 870 aa27.79■■■□□ 2.04
HLA-B-250ENST00000434333 PCDH11XQ9BZA7 1347 aa27.78■■■□□ 2.04
HLA-B-250ENST00000434333 PCDH11YQ9BZA8 1340 aa27.78■■■□□ 2.04
HLA-B-250ENST00000434333 KCNQ4P56696 695 aa27.77■■■□□ 2.04
HLA-B-250ENST00000434333 TOGARAM1Q9Y4F4 1720 aa27.77■■■□□ 2.04
HLA-B-250ENST00000434333 TUBGCP6Q96RT7 1819 aa27.76■■■□□ 2.04
HLA-B-250ENST00000434333 CYP27B1O15528 508 aa27.76■■■□□ 2.03
HLA-B-250ENST00000434333 PANK3Q9H999 370 aa27.76■■■□□ 2.03
HLA-B-250ENST00000434333 EYA1Q99502 592 aa27.74■■■□□ 2.03
HLA-B-250ENST00000434333 PNPLA7Q6ZV29 1317 aa27.71■■■□□ 2.03
HLA-B-250ENST00000434333 TNNT2P45379 298 aaPredicted RBP27.71■■■□□ 2.03
HLA-B-250ENST00000434333 ITGB4P16144 1822 aa27.7■■■□□ 2.02
HLA-B-250ENST00000434333 COL24A1Q17RW2 1714 aa27.7■■■□□ 2.02
HLA-B-250ENST00000434333 EIF4A2Q14240 407 aaKnown RBP27.69■■■□□ 2.02
HLA-B-250ENST00000434333 CCNL1Q9UK58 526 aaPredicted RBP27.69■■■□□ 2.02
HLA-B-250ENST00000434333 NKX1-1Q15270 411 aaPredicted RBP27.67■■■□□ 2.02
HLA-B-250ENST00000434333 FHDC1Q9C0D6 1143 aaPredicted RBP27.67■■■□□ 2.02
HLA-B-250ENST00000434333 C5P01031 1676 aa27.65■■■□□ 2.02
HLA-B-250ENST00000434333 SLC16A10Q8TF71 515 aa27.65■■■□□ 2.02
HLA-B-250ENST00000434333 SYT17Q9BSW7 474 aa27.65■■■□□ 2.02
HLA-B-250ENST00000434333 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.65■■■□□ 2.02
HLA-B-250ENST00000434333 TFCP2L1Q9NZI6 479 aa27.65■■■□□ 2.02
HLA-B-250ENST00000434333 PALLDQ8WX93 1383 aa27.64■■■□□ 2.02
HLA-B-250ENST00000434333 MPRIPQ6WCQ1 1025 aa27.64■■■□□ 2.02
HLA-B-250ENST00000434333 SPG7Q9UQ90 795 aa27.64■■■□□ 2.02
HLA-B-250ENST00000434333 TAF1LQ8IZX4 1826 aa27.63■■■□□ 2.01
HLA-B-250ENST00000434333 ARXQ96QS3 562 aa27.63■■■□□ 2.01
HLA-B-250ENST00000434333 IGSF1Q8N6C5 1336 aa27.63■■■□□ 2.01
HLA-B-250ENST00000434333 MAP3K5Q99683 1374 aa27.61■■■□□ 2.01
HLA-B-250ENST00000434333 PLEKHG2Q9H7P9 1386 aa27.6■■■□□ 2.01
HLA-B-250ENST00000434333 PHKG2P15735 406 aa27.59■■■□□ 2.01
HLA-B-250ENST00000434333 PIGBQ92521 554 aa27.59■■■□□ 2.01
HLA-B-250ENST00000434333 KIF7Q2M1P5 1343 aa27.59■■■□□ 2.01
HLA-B-250ENST00000434333 DCAF8L1A6NGE4 600 aa27.57■■■□□ 2
HLA-B-250ENST00000434333 MORC1Q86VD1 984 aa27.57■■■□□ 2
HLA-B-250ENST00000434333 COL23A1Q86Y22 540 aaPredicted RBP27.57■■■□□ 2
HLA-B-250ENST00000434333 YY1P25490 414 aa27.56■■■□□ 2
HLA-B-250ENST00000434333 IFNL2Q8IZJ0 200 aa27.56■■■□□ 2
HLA-B-250ENST00000434333 UTRNP46939 3433 aa27.55■■■□□ 2
HLA-B-250ENST00000434333 C4BP0C0L5 1744 aa27.55■■■□□ 2
HLA-B-250ENST00000434333 AMER1Q5JTC6 1135 aaPredicted RBP27.55■■■□□ 2
HLA-B-250ENST00000434333 SMARCC1Q92922 1105 aaPredicted RBP27.55■■■□□ 2
HLA-B-250ENST00000434333 KNSTRNQ9Y448 316 aa27.55■■■□□ 2
HLA-B-250ENST00000434333 POLD1P28340 1107 aa27.52■■■□□ 2
HLA-B-250ENST00000434333 TMOD3Q9NYL9 352 aa27.51■■□□□ 1.99
HLA-B-250ENST00000434333 AMIGO3Q86WK7 504 aa27.5■■□□□ 1.99
HLA-B-250ENST00000434333 UBR3Q6ZT12 1888 aa27.49■■□□□ 1.99
HLA-B-250ENST00000434333 AEBP1Q8IUX7 1158 aa27.49■■□□□ 1.99
HLA-B-250ENST00000434333 ASAP1Q9ULH1 1129 aa27.49■■□□□ 1.99
HLA-B-250ENST00000434333 LOC102724428A0A0B4J2F2 783 aa27.48■■□□□ 1.99
HLA-B-250ENST00000434333 HMGB2P26583 209 aaKnown RBP27.48■■□□□ 1.99
HLA-B-250ENST00000434333 SIK1P57059 783 aa27.48■■□□□ 1.99
HLA-B-250ENST00000434333 PER1O15534 1290 aaPredicted RBP27.47■■□□□ 1.99
HLA-B-250ENST00000434333 MSH5O43196 834 aa27.47■■□□□ 1.99
HLA-B-250ENST00000434333 ATG3Q9NT62 314 aa27.46■■□□□ 1.99
HLA-B-250ENST00000434333 KDM6AO15550 1401 aaPredicted RBP27.46■■□□□ 1.99
HLA-B-250ENST00000434333 KDRP35968 1356 aa27.46■■□□□ 1.99
HLA-B-250ENST00000434333 IL13P35225 146 aa27.45■■□□□ 1.98
HLA-B-250ENST00000434333 PLEKHO1Q53GL0 409 aaPredicted RBP27.45■■□□□ 1.98
HLA-B-250ENST00000434333 LINC00116Q8NCU8 138 aa27.45■■□□□ 1.98
HLA-B-250ENST00000434333 FLAD1Q8NFF5 587 aa27.45■■□□□ 1.98
HLA-B-250ENST00000434333 ITPK1Q13572 414 aa27.44■■□□□ 1.98
HLA-B-250ENST00000434333 MSL1Q68DK7 614 aa27.44■■□□□ 1.98
HLA-B-250ENST00000434333 KLHL34Q8N239 644 aa27.44■■□□□ 1.98
HLA-B-250ENST00000434333 AK7Q96M32 723 aa27.44■■□□□ 1.98
HLA-B-250ENST00000434333 ERVV-2B6SEH9 535 aa27.42■■□□□ 1.98
HLA-B-250ENST00000434333 AMOTQ4VCS5 1084 aa27.42■■□□□ 1.98
HLA-B-250ENST00000434333 ZNF530Q6P9A1 599 aaPredicted RBP27.42■■□□□ 1.98
HLA-B-250ENST00000434333 SMIM5Q71RC9 77 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms