RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 ADAMTSL3P82987 1691 aa21.43■■□□□ 1.02
CTSD-204ENST00000433655 CHD1LQ86WJ1 897 aa21.43■■□□□ 1.02
CTSD-204ENST00000433655 AMPHP49418 695 aa21.43■■□□□ 1.02
CTSD-204ENST00000433655 NLRP6P59044 892 aa21.43■■□□□ 1.02
CTSD-204ENST00000433655 LNPKQ9C0E8 428 aa21.43■■□□□ 1.02
CTSD-204ENST00000433655 LTN1O94822 1766 aa21.41■■□□□ 1.02
CTSD-204ENST00000433655 GCC1Q96CN9 775 aa21.41■■□□□ 1.02
CTSD-204ENST00000433655 UPF2Q9HAU5 1272 aaKnown RBP21.41■■□□□ 1.02
CTSD-204ENST00000433655 HOXC9P31274 260 aa21.4■■□□□ 1.02
CTSD-204ENST00000433655 NFKBIBQ15653 356 aa21.4■■□□□ 1.02
CTSD-204ENST00000433655 NUTM2GQ5VZR2 741 aa21.4■■□□□ 1.02
CTSD-204ENST00000433655 INTS3Q68E01 1043 aaKnown RBP21.4■■□□□ 1.02
CTSD-204ENST00000433655 MIS18AQ9NYP9 233 aa21.38■■□□□ 1.01
CTSD-204ENST00000433655 ANKLE2Q86XL3 938 aa21.38■■□□□ 1.01
CTSD-204ENST00000433655 ATP10DQ9P241 1426 aa21.37■■□□□ 1.01
CTSD-204ENST00000433655 HAP1P54257 671 aaPredicted RBP21.37■■□□□ 1.01
CTSD-204ENST00000433655 NFAT5O94916 1531 aa21.37■■□□□ 1.01
CTSD-204ENST00000433655 ABTB2Q8N961 1025 aa21.36■■□□□ 1.01
CTSD-204ENST00000433655 ANKRD45Q5TZF3 282 aa21.36■■□□□ 1.01
CTSD-204ENST00000433655 GAS2L2Q8NHY3 880 aa21.36■■□□□ 1.01
CTSD-204ENST00000433655 PHF8Q9UPP1 1060 aa21.36■■□□□ 1.01
CTSD-204ENST00000433655 FAM208AQ9UK61 1670 aaKnown RBP21.36■■□□□ 1.01
CTSD-204ENST00000433655 ADGRL3Q9HAR2 1447 aa21.35■■□□□ 1.01
CTSD-204ENST00000433655 BECN1Q14457 450 aa21.35■■□□□ 1.01
CTSD-204ENST00000433655 MSH6P52701 1360 aa21.35■■□□□ 1.01
CTSD-204ENST00000433655 PTPRCP08575 1304 aa21.34■■□□□ 1.01
CTSD-204ENST00000433655 MFAP1P55081 439 aaKnown RBP21.34■■□□□ 1.01
CTSD-204ENST00000433655 RTF1Q92541 710 aaKnown RBP21.34■■□□□ 1.01
CTSD-204ENST00000433655 RBM33Q96EV2 1170 aaKnown RBP21.34■■□□□ 1.01
CTSD-204ENST00000433655 TSPYL4Q9UJ04 414 aa21.34■■□□□ 1.01
CTSD-204ENST00000433655 RTL1A6NKG5 1358 aa21.33■■□□□ 1.01
CTSD-204ENST00000433655 BMP2KLQ5H9B9 411 aa21.33■■□□□ 1.01
CTSD-204ENST00000433655 TBC1D2Q9BYX2 928 aa21.33■■□□□ 1.01
CTSD-204ENST00000433655 C22orf23Q9BZE7 217 aa21.33■■□□□ 1.01
CTSD-204ENST00000433655 PHRF1Q9P1Y6 1649 aaKnown RBP21.32■■□□□ 1
CTSD-204ENST00000433655 HTATSF1O43719 755 aaKnown RBP21.31■■□□□ 1
CTSD-204ENST00000433655 SETD1BQ9UPS6 1966 aaKnown RBP21.31■■□□□ 1
CTSD-204ENST00000433655 SLC4A2P04920 1241 aa21.3■■□□□ 1
CTSD-204ENST00000433655 G2E3Q7L622 706 aa21.3■■□□□ 1
CTSD-204ENST00000433655 ANKRD44Q8N8A2 993 aa21.29■■□□□ 1
CTSD-204ENST00000433655 ANTXR1Q9H6X2 564 aa21.29■■□□□ 1
CTSD-204ENST00000433655 DCTPP1Q9H773 170 aa21.29■■□□□ 1
CTSD-204ENST00000433655 RGPD2P0DJD1 1756 aa21.29■■□□□ 1
CTSD-204ENST00000433655 MAP3K5Q99683 1374 aa21.29■■□□□ 1
CTSD-204ENST00000433655 GNAT3A8MTJ3 354 aa21.28■■□□□ 1
CTSD-204ENST00000433655 NPHP4O75161 1426 aaPredicted RBP21.28■■□□□ 1
CTSD-204ENST00000433655 CEP85Q6P2H3 762 aa21.28■■□□□ 1
CTSD-204ENST00000433655 LTV1Q96GA3 475 aaPredicted RBP21.28■■□□□ 1
CTSD-204ENST00000433655 N4BP2Q86UW6 1770 aaPredicted RBP21.27■■□□□ 1
CTSD-204ENST00000433655 FRAT2O75474 233 aaPredicted RBP21.27■■□□□ 1
CTSD-204ENST00000433655 IL17REQ8NFR9 667 aa21.27■■□□□ 1
CTSD-204ENST00000433655 MEIS3Q99687 375 aa21.27■■□□□ 1
CTSD-204ENST00000433655 C14orf37Q86TY3 774 aa21.26■□□□□ 0.99
CTSD-204ENST00000433655 MED1Q15648 1581 aaPredicted RBP21.25■□□□□ 0.99
CTSD-204ENST00000433655 RBM25P49756 843 aaKnown RBP21.25■□□□□ 0.99
CTSD-204ENST00000433655 USHBP1Q8N6Y0 703 aa21.25■□□□□ 0.99
CTSD-204ENST00000433655 IP6K1Q92551 441 aa21.25■□□□□ 0.99
CTSD-204ENST00000433655 CACNA1FO60840 1977 aa21.25■□□□□ 0.99
CTSD-204ENST00000433655 RPAP2Q8IXW5 612 aaPredicted RBP21.24■□□□□ 0.99
CTSD-204ENST00000433655 SLKQ9H2G2 1235 aaPredicted RBP21.24■□□□□ 0.99
CTSD-204ENST00000433655 F6X3S4 739 aa21.23■□□□□ 0.99
CTSD-204ENST00000433655 ESCO1Q5FWF5 840 aa21.23■□□□□ 0.99
CTSD-204ENST00000433655 TRPM3Q9HCF6 1732 aaPredicted RBP21.23■□□□□ 0.99
CTSD-204ENST00000433655 GSPT1P15170 499 aaKnown RBP21.22■□□□□ 0.99
CTSD-204ENST00000433655 PLEKHM2Q8IWE5 1019 aa21.22■□□□□ 0.99
CTSD-204ENST00000433655 SLIT3O75094 1523 aa21.22■□□□□ 0.99
CTSD-204ENST00000433655 TBC1D9Q6ZT07 1266 aa21.22■□□□□ 0.99
CTSD-204ENST00000433655 LMO7Q8WWI1 1683 aa21.21■□□□□ 0.99
CTSD-204ENST00000433655 KDM3BQ7LBC6 1761 aa21.21■□□□□ 0.99
CTSD-204ENST00000433655 NBPF6Q5VWK0 638 aa21.21■□□□□ 0.99
CTSD-204ENST00000433655 NBPF4Q96M43 638 aa21.21■□□□□ 0.99
CTSD-204ENST00000433655 PSME1Q06323 249 aa21.2■□□□□ 0.98
CTSD-204ENST00000433655 BABAM1Q9NWV8 329 aa21.2■□□□□ 0.98
CTSD-204ENST00000433655 CEMIPQ8WUJ3 1361 aa21.2■□□□□ 0.98
CTSD-204ENST00000433655 CCT4P50991 539 aaKnown RBP21.19■□□□□ 0.98
CTSD-204ENST00000433655 TAF7Q15545 349 aaPredicted RBP21.19■□□□□ 0.98
CTSD-204ENST00000433655 C16orf71Q8IYS4 520 aaPredicted RBP21.19■□□□□ 0.98
CTSD-204ENST00000433655 SOS1Q07889 1333 aaPredicted RBP21.18■□□□□ 0.98
CTSD-204ENST00000433655 SLC4A10Q6U841 1118 aa21.18■□□□□ 0.98
CTSD-204ENST00000433655 ORAI2Q96SN7 254 aa21.18■□□□□ 0.98
CTSD-204ENST00000433655 STK31Q9BXU1 1019 aa21.18■□□□□ 0.98
CTSD-204ENST00000433655 FLIIQ13045 1269 aa21.17■□□□□ 0.98
CTSD-204ENST00000433655 CCDC30Q5VVM6 783 aa21.17■□□□□ 0.98
CTSD-204ENST00000433655 OTUD7AQ8TE49 926 aaPredicted RBP21.17■□□□□ 0.98
CTSD-204ENST00000433655 KIF2CQ99661 725 aa21.17■□□□□ 0.98
CTSD-204ENST00000433655 NCAPD2Q15021 1401 aa21.17■□□□□ 0.98
CTSD-204ENST00000433655 CAMTA1Q9Y6Y1 1673 aa21.17■□□□□ 0.98
CTSD-204ENST00000433655 TTC22Q5TAA0 569 aa21.17■□□□□ 0.98
CTSD-204ENST00000433655 KCNH5Q8NCM2 988 aa21.17■□□□□ 0.98
CTSD-204ENST00000433655 NCOA3Q9Y6Q9 1424 aa21.16■□□□□ 0.98
CTSD-204ENST00000433655 CDC45O75419 566 aa21.16■□□□□ 0.98
CTSD-204ENST00000433655 BCL11AQ9H165 835 aa21.16■□□□□ 0.98
CTSD-204ENST00000433655 PXDNLA1KZ92 1463 aa21.15■□□□□ 0.98
CTSD-204ENST00000433655 SMARCA5O60264 1052 aaPredicted RBP21.15■□□□□ 0.98
CTSD-204ENST00000433655 GSE1Q14687 1217 aa21.15■□□□□ 0.98
CTSD-204ENST00000433655 NECTIN2Q92692 538 aa21.14■□□□□ 0.98
CTSD-204ENST00000433655 XPCQ01831 940 aaPredicted RBP21.14■□□□□ 0.97
CTSD-204ENST00000433655 LRRC59Q96AG4 307 aaKnown RBP21.14■□□□□ 0.97
CTSD-204ENST00000433655 KIF1AQ12756 1690 aa21.14■□□□□ 0.97
CTSD-204ENST00000433655 FKBP5Q13451 457 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms