RNA–Protein interactions for RNA: ENST00000433627.9

LSM14A-201, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LSM14A, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-201ENST00000433627 XRN1Q8IZH2 1706 aaKnown RBP17.26■□□□□ 0.35
LSM14A-201ENST00000433627 USP19O94966 1318 aa17.26■□□□□ 0.35
LSM14A-201ENST00000433627 CHMP4BQ9H444 224 aaKnown RBP17.26■□□□□ 0.35
LSM14A-201ENST00000433627 ANKARQ7Z5J8 1434 aa17.26■□□□□ 0.35
LSM14A-201ENST00000433627 PIK3R4Q99570 1358 aa17.26■□□□□ 0.35
LSM14A-201ENST00000433627 ABCC4O15439 1325 aa17.26■□□□□ 0.35
LSM14A-201ENST00000433627 IGSF1Q8N6C5 1336 aa17.25■□□□□ 0.35
LSM14A-201ENST00000433627 APBB1O00213 710 aa17.25■□□□□ 0.35
LSM14A-201ENST00000433627 SETD1BQ9UPS6 1966 aaKnown RBP17.25■□□□□ 0.35
LSM14A-201ENST00000433627 CHD1LQ86WJ1 897 aa17.25■□□□□ 0.35
LSM14A-201ENST00000433627 ORAI2Q96SN7 254 aa17.25■□□□□ 0.35
LSM14A-201ENST00000433627 PIK3C2AO00443 1686 aa17.25■□□□□ 0.35
LSM14A-201ENST00000433627 HAP1P54257 671 aaPredicted RBP17.24■□□□□ 0.35
LSM14A-201ENST00000433627 NALCNQ8IZF0 1738 aa17.24■□□□□ 0.35
LSM14A-201ENST00000433627 NUCB1Q02818 461 aa17.23■□□□□ 0.35
LSM14A-201ENST00000433627 DEKP35659 375 aaKnown RBP17.23■□□□□ 0.35
LSM14A-201ENST00000433627 GNAT3A8MTJ3 354 aa17.22■□□□□ 0.35
LSM14A-201ENST00000433627 F6X3S4 739 aa17.22■□□□□ 0.35
LSM14A-201ENST00000433627 PROSER2Q86WR7 435 aaPredicted RBP17.22■□□□□ 0.35
LSM14A-201ENST00000433627 G2E3Q7L622 706 aa17.21■□□□□ 0.35
LSM14A-201ENST00000433627 SIRT2Q8IXJ6 389 aa17.21■□□□□ 0.35
LSM14A-201ENST00000433627 CRB1P82279 1406 aa17.21■□□□□ 0.35
LSM14A-201ENST00000433627 SLKQ9H2G2 1235 aaPredicted RBP17.21■□□□□ 0.34
LSM14A-201ENST00000433627 BECN1Q14457 450 aa17.2■□□□□ 0.34
LSM14A-201ENST00000433627 SPRYD3Q8NCJ5 442 aa17.2■□□□□ 0.34
LSM14A-201ENST00000433627 STK31Q9BXU1 1019 aa17.2■□□□□ 0.34
LSM14A-201ENST00000433627 LRRC59Q96AG4 307 aaKnown RBP17.19■□□□□ 0.34
LSM14A-201ENST00000433627 FMN2Q9NZ56 1722 aa17.19■□□□□ 0.34
LSM14A-201ENST00000433627 KDRP35968 1356 aa17.19■□□□□ 0.34
LSM14A-201ENST00000433627 NPHP4O75161 1426 aaPredicted RBP17.19■□□□□ 0.34
LSM14A-201ENST00000433627 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
LSM14A-201ENST00000433627 MEIS3Q99687 375 aa17.18■□□□□ 0.34
LSM14A-201ENST00000433627 TBC1D32Q96NH3 1257 aa17.18■□□□□ 0.34
LSM14A-201ENST00000433627 KIAA0232Q92628 1395 aa17.18■□□□□ 0.34
LSM14A-201ENST00000433627 MSH6P52701 1360 aa17.17■□□□□ 0.34
LSM14A-201ENST00000433627 NBPF6Q5VWK0 638 aa17.17■□□□□ 0.34
LSM14A-201ENST00000433627 IL17REQ8NFR9 667 aa17.17■□□□□ 0.34
LSM14A-201ENST00000433627 NBPF4Q96M43 638 aa17.17■□□□□ 0.34
LSM14A-201ENST00000433627 RGPD1P0DJD0 1748 aa17.17■□□□□ 0.34
LSM14A-201ENST00000433627 FKBP5Q13451 457 aaPredicted RBP17.17■□□□□ 0.34
LSM14A-201ENST00000433627 C22orf23Q9BZE7 217 aa17.17■□□□□ 0.34
LSM14A-201ENST00000433627 ADGRL3Q9HAR2 1447 aa17.16■□□□□ 0.34
LSM14A-201ENST00000433627 INTS3Q68E01 1043 aaKnown RBP17.16■□□□□ 0.34
LSM14A-201ENST00000433627 IP6K1Q92551 441 aa17.16■□□□□ 0.34
LSM14A-201ENST00000433627 VIRMAQ69YN4 1812 aaKnown RBP17.16■□□□□ 0.34
LSM14A-201ENST00000433627 MAP3K5Q99683 1374 aa17.15■□□□□ 0.34
LSM14A-201ENST00000433627 NFKBIBQ15653 356 aa17.15■□□□□ 0.34
LSM14A-201ENST00000433627 PTPRCP08575 1304 aa17.14■□□□□ 0.34
LSM14A-201ENST00000433627 CHD2O14647 1828 aaKnown RBP17.14■□□□□ 0.34
LSM14A-201ENST00000433627 EIF2S2P20042 333 aaKnown RBP17.14■□□□□ 0.33
LSM14A-201ENST00000433627 KCNH5Q8NCM2 988 aa17.14■□□□□ 0.33
LSM14A-201ENST00000433627 GCP02774 474 aa17.13■□□□□ 0.33
LSM14A-201ENST00000433627 TAF7Q15545 349 aaPredicted RBP17.13■□□□□ 0.33
LSM14A-201ENST00000433627 SMARCA5O60264 1052 aaPredicted RBP17.13■□□□□ 0.33
LSM14A-201ENST00000433627 C16orf71Q8IYS4 520 aaPredicted RBP17.13■□□□□ 0.33
LSM14A-201ENST00000433627 CCDC30Q5VVM6 783 aa17.12■□□□□ 0.33
LSM14A-201ENST00000433627 DDX17Q92841 729 aaKnown RBP17.12■□□□□ 0.33
LSM14A-201ENST00000433627 ZC3H6P61129 1189 aaKnown RBP17.12■□□□□ 0.33
LSM14A-201ENST00000433627 ZNF530Q6P9A1 599 aaPredicted RBP17.12■□□□□ 0.33
LSM14A-201ENST00000433627 KRT28Q7Z3Y7 464 aa17.12■□□□□ 0.33
LSM14A-201ENST00000433627 LGR6Q9HBX8 967 aa17.12■□□□□ 0.33
LSM14A-201ENST00000433627 RGS12O14924 1447 aa17.11■□□□□ 0.33
LSM14A-201ENST00000433627 FLIIQ13045 1269 aa17.11■□□□□ 0.33
LSM14A-201ENST00000433627 CEP85Q6P2H3 762 aa17.11■□□□□ 0.33
LSM14A-201ENST00000433627 MPRIPQ6WCQ1 1025 aa17.11■□□□□ 0.33
LSM14A-201ENST00000433627 HTATSF1O43719 755 aaKnown RBP17.11■□□□□ 0.33
LSM14A-201ENST00000433627 ANKRD44Q8N8A2 993 aa17.11■□□□□ 0.33
LSM14A-201ENST00000433627 TBC1D2Q9BYX2 928 aa17.11■□□□□ 0.33
LSM14A-201ENST00000433627 HDGFL1Q5TGJ6 251 aa17.1■□□□□ 0.33
LSM14A-201ENST00000433627 KIF24Q5T7B8 1368 aa17.1■□□□□ 0.33
LSM14A-201ENST00000433627 TEFQ10587 303 aa17.1■□□□□ 0.33
LSM14A-201ENST00000433627 OTUD7AQ8TE49 926 aaPredicted RBP17.09■□□□□ 0.33
LSM14A-201ENST00000433627 FRAT2O75474 233 aaPredicted RBP17.09■□□□□ 0.33
LSM14A-201ENST00000433627 BMP2KLQ5H9B9 411 aa17.09■□□□□ 0.33
LSM14A-201ENST00000433627 DCTPP1Q9H773 170 aa17.09■□□□□ 0.33
LSM14A-201ENST00000433627 RTL1A6NKG5 1358 aa17.09■□□□□ 0.33
LSM14A-201ENST00000433627 ADAMTSL3P82987 1691 aa17.09■□□□□ 0.33
LSM14A-201ENST00000433627 RPAP2Q8IXW5 612 aaPredicted RBP17.08■□□□□ 0.33
LSM14A-201ENST00000433627 ANKRD24Q8TF21 1146 aa17.08■□□□□ 0.33
LSM14A-201ENST00000433627 CCT4P50991 539 aaKnown RBP17.08■□□□□ 0.32
LSM14A-201ENST00000433627 ATF3P18847 181 aa17.08■□□□□ 0.32
LSM14A-201ENST00000433627 KCNQ3O43525 872 aa17.07■□□□□ 0.32
LSM14A-201ENST00000433627 ZNF142P52746 1687 aaPredicted RBP17.07■□□□□ 0.32
LSM14A-201ENST00000433627 NWD1Q149M9 1564 aa17.07■□□□□ 0.32
LSM14A-201ENST00000433627 ANXA1P04083 346 aa17.07■□□□□ 0.32
LSM14A-201ENST00000433627 HSPA2P54652 639 aa17.07■□□□□ 0.32
LSM14A-201ENST00000433627 USP35Q9P2H5 1018 aa17.07■□□□□ 0.32
LSM14A-201ENST00000433627 MARF1Q9Y4F3 1742 aaKnown RBP17.07■□□□□ 0.32
LSM14A-201ENST00000433627 LTN1O94822 1766 aa17.07■□□□□ 0.32
LSM14A-201ENST00000433627 C1orf141Q5JVX7 400 aa17.06■□□□□ 0.32
LSM14A-201ENST00000433627 PHAXQ9H814 394 aaKnown RBP17.06■□□□□ 0.32
LSM14A-201ENST00000433627 PLEKHO1Q53GL0 409 aaPredicted RBP17.06■□□□□ 0.32
LSM14A-201ENST00000433627 TBC1D9Q6ZT07 1266 aa17.06■□□□□ 0.32
LSM14A-201ENST00000433627 PLEKHM2Q8IWE5 1019 aa17.06■□□□□ 0.32
LSM14A-201ENST00000433627 EXOC6BQ9Y2D4 811 aa17.06■□□□□ 0.32
LSM14A-201ENST00000433627 ATP10DQ9P241 1426 aa17.05■□□□□ 0.32
LSM14A-201ENST00000433627 HMMRO75330 724 aa17.05■□□□□ 0.32
LSM14A-201ENST00000433627 ARHGEF25Q86VW2 580 aa17.05■□□□□ 0.32
LSM14A-201ENST00000433627 C19orf44Q9H6X5 657 aa17.05■□□□□ 0.32
LSM14A-201ENST00000433627 AXIN2Q9Y2T1 843 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms