RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 BRPF1P55201 1214 aaPredicted RBP25■■□□□ 1.59
VRK2-205ENST00000432057 LMOD2Q6P5Q4 547 aa25■■□□□ 1.59
VRK2-205ENST00000432057 GAS2L2Q8NHY3 880 aa25■■□□□ 1.59
VRK2-205ENST00000432057 PCDHB15Q9Y5E8 787 aa25■■□□□ 1.59
VRK2-205ENST00000432057 USHBP1Q8N6Y0 703 aa25■■□□□ 1.59
VRK2-205ENST00000432057 CHL1O00533 1208 aa24.99■■□□□ 1.59
VRK2-205ENST00000432057 ITPRIPQ8IWB1 547 aa24.99■■□□□ 1.59
VRK2-205ENST00000432057 USP19O94966 1318 aa24.99■■□□□ 1.59
VRK2-205ENST00000432057 TMEM57Q8N5G2 664 aa24.98■■□□□ 1.59
VRK2-205ENST00000432057 MED1Q15648 1581 aaPredicted RBP24.98■■□□□ 1.59
VRK2-205ENST00000432057 VIRMAQ69YN4 1812 aaKnown RBP24.98■■□□□ 1.59
VRK2-205ENST00000432057 RTF1Q92541 710 aaKnown RBP24.98■■□□□ 1.59
VRK2-205ENST00000432057 GCP02774 474 aa24.97■■□□□ 1.59
VRK2-205ENST00000432057 CAMTA1Q9Y6Y1 1673 aa24.96■■□□□ 1.59
VRK2-205ENST00000432057 MSH6P52701 1360 aa24.96■■□□□ 1.59
VRK2-205ENST00000432057 DDX19BQ9UMR2 479 aa24.96■■□□□ 1.59
VRK2-205ENST00000432057 PDE4AP27815 886 aa24.96■■□□□ 1.59
VRK2-205ENST00000432057 KRT24Q2M2I5 525 aa24.95■■□□□ 1.58
VRK2-205ENST00000432057 ARHGEF25Q86VW2 580 aa24.94■■□□□ 1.58
VRK2-205ENST00000432057 KIAA0232Q92628 1395 aa24.94■■□□□ 1.58
VRK2-205ENST00000432057 MAP3K5Q99683 1374 aa24.93■■□□□ 1.58
VRK2-205ENST00000432057 CRYBG1Q9Y4K1 1723 aa24.93■■□□□ 1.58
VRK2-205ENST00000432057 RGS3P49796 1198 aa24.93■■□□□ 1.58
VRK2-205ENST00000432057 NBPF6Q5VWK0 638 aa24.93■■□□□ 1.58
VRK2-205ENST00000432057 DDX17Q92841 729 aaKnown RBP24.93■■□□□ 1.58
VRK2-205ENST00000432057 NBPF4Q96M43 638 aa24.93■■□□□ 1.58
VRK2-205ENST00000432057 BACH2Q9BYV9 841 aa24.93■■□□□ 1.58
VRK2-205ENST00000432057 LMO7Q8WWI1 1683 aa24.93■■□□□ 1.58
VRK2-205ENST00000432057 CADPS2Q86UW7 1296 aa24.92■■□□□ 1.58
VRK2-205ENST00000432057 MIS18AQ9NYP9 233 aa24.92■■□□□ 1.58
VRK2-205ENST00000432057 GNAT3A8MTJ3 354 aa24.91■■□□□ 1.58
VRK2-205ENST00000432057 HTATSF1O43719 755 aaKnown RBP24.91■■□□□ 1.58
VRK2-205ENST00000432057 ARHGAP45Q92619 1136 aa24.91■■□□□ 1.58
VRK2-205ENST00000432057 FAM208AQ9UK61 1670 aaKnown RBP24.9■■□□□ 1.58
VRK2-205ENST00000432057 LRRC59Q96AG4 307 aaKnown RBP24.9■■□□□ 1.58
VRK2-205ENST00000432057 TSPYL4Q9UJ04 414 aa24.89■■□□□ 1.58
VRK2-205ENST00000432057 RWDD1Q9H446 243 aaPredicted RBP24.89■■□□□ 1.57
VRK2-205ENST00000432057 NCAPD2Q15021 1401 aa24.88■■□□□ 1.57
VRK2-205ENST00000432057 PXDNQ92626 1479 aa24.88■■□□□ 1.57
VRK2-205ENST00000432057 ABCC4O15439 1325 aa24.88■■□□□ 1.57
VRK2-205ENST00000432057 ZBTB40Q9NUA8 1239 aa24.87■■□□□ 1.57
VRK2-205ENST00000432057 COL18A1P39060 1754 aa24.87■■□□□ 1.57
VRK2-205ENST00000432057 TNS3Q68CZ2 1445 aa24.86■■□□□ 1.57
VRK2-205ENST00000432057 HAP1P54257 671 aaPredicted RBP24.85■■□□□ 1.57
VRK2-205ENST00000432057 ANKRD24Q8TF21 1146 aa24.85■■□□□ 1.57
VRK2-205ENST00000432057 NPHP3Q7Z494 1330 aa24.85■■□□□ 1.57
VRK2-205ENST00000432057 IL17REQ8NFR9 667 aa24.85■■□□□ 1.57
VRK2-205ENST00000432057 KDM3BQ7LBC6 1761 aa24.84■■□□□ 1.57
VRK2-205ENST00000432057 MSH5O43196 834 aa24.84■■□□□ 1.57
VRK2-205ENST00000432057 API5Q9BZZ5 524 aaKnown RBP24.83■■□□□ 1.57
VRK2-205ENST00000432057 AXIN2Q9Y2T1 843 aa24.83■■□□□ 1.57
VRK2-205ENST00000432057 RGS12O14924 1447 aa24.82■■□□□ 1.56
VRK2-205ENST00000432057 CACNA1FO60840 1977 aa24.82■■□□□ 1.56
VRK2-205ENST00000432057 ZC3H6P61129 1189 aaKnown RBP24.82■■□□□ 1.56
VRK2-205ENST00000432057 ZNF335Q9H4Z2 1342 aaPredicted RBP24.82■■□□□ 1.56
VRK2-205ENST00000432057 PDZRN3Q9UPQ7 1066 aa24.81■■□□□ 1.56
VRK2-205ENST00000432057 HDAC1Q13547 482 aaPredicted RBP24.81■■□□□ 1.56
VRK2-205ENST00000432057 CEMIPQ8WUJ3 1361 aa24.79■■□□□ 1.56
VRK2-205ENST00000432057 ZBTB7BO15156 539 aaPredicted RBP24.79■■□□□ 1.56
VRK2-205ENST00000432057 ANP32AP39687 249 aaKnown RBP24.79■■□□□ 1.56
VRK2-205ENST00000432057 FAM161AQ3B820 660 aa24.79■■□□□ 1.56
VRK2-205ENST00000432057 C8orf34Q49A92 452 aa24.78■■□□□ 1.56
VRK2-205ENST00000432057 ERBB3P21860 1342 aa24.77■■□□□ 1.56
VRK2-205ENST00000432057 TAF7Q15545 349 aaPredicted RBP24.77■■□□□ 1.56
VRK2-205ENST00000432057 ZNF530Q6P9A1 599 aaPredicted RBP24.77■■□□□ 1.56
VRK2-205ENST00000432057 BRINP3Q76B58 766 aa24.77■■□□□ 1.56
VRK2-205ENST00000432057 NPM2Q86SE8 214 aaKnown RBP24.77■■□□□ 1.56
VRK2-205ENST00000432057 SIPA1L3O60292 1781 aaPredicted RBP24.76■■□□□ 1.55
VRK2-205ENST00000432057 SPATA31A3Q5VYP0 1347 aa24.76■■□□□ 1.55
VRK2-205ENST00000432057 CABLES1Q8TDN4 633 aa24.76■■□□□ 1.55
VRK2-205ENST00000432057 ABCC6O95255 1503 aa24.75■■□□□ 1.55
VRK2-205ENST00000432057 PLEKHO1Q53GL0 409 aaPredicted RBP24.75■■□□□ 1.55
VRK2-205ENST00000432057 CHMP4BQ9H444 224 aaKnown RBP24.75■■□□□ 1.55
VRK2-205ENST00000432057 C1orf115Q9H7X2 142 aa24.75■■□□□ 1.55
VRK2-205ENST00000432057 ABCA3Q99758 1704 aa24.74■■□□□ 1.55
VRK2-205ENST00000432057 PTPRCP08575 1304 aa24.74■■□□□ 1.55
VRK2-205ENST00000432057 N4BP2Q86UW6 1770 aaPredicted RBP24.74■■□□□ 1.55
VRK2-205ENST00000432057 SLC4A2P04920 1241 aa24.74■■□□□ 1.55
VRK2-205ENST00000432057 BABAM1Q9NWV8 329 aa24.74■■□□□ 1.55
VRK2-205ENST00000432057 LGR6Q9HBX8 967 aa24.73■■□□□ 1.55
VRK2-205ENST00000432057 ADAMTS7Q9UKP4 1686 aa24.73■■□□□ 1.55
VRK2-205ENST00000432057 AKAP4Q5JQC9 854 aa24.72■■□□□ 1.55
VRK2-205ENST00000432057 AMOTQ4VCS5 1084 aa24.72■■□□□ 1.55
VRK2-205ENST00000432057 INTS3Q68E01 1043 aaKnown RBP24.71■■□□□ 1.55
VRK2-205ENST00000432057 SMC5Q8IY18 1101 aa24.71■■□□□ 1.55
VRK2-205ENST00000432057 G2E3Q7L622 706 aa24.7■■□□□ 1.55
VRK2-205ENST00000432057 SCN11AQ9UI33 1791 aa24.7■■□□□ 1.54
VRK2-205ENST00000432057 NHSL1Q5SYE7 1610 aa24.69■■□□□ 1.54
VRK2-205ENST00000432057 MPRIPQ6WCQ1 1025 aa24.68■■□□□ 1.54
VRK2-205ENST00000432057 OVOS2A0A0G2JMS6 1433 aa24.68■■□□□ 1.54
VRK2-205ENST00000432057 CHRNA2Q15822 529 aa24.68■■□□□ 1.54
VRK2-205ENST00000432057 C1orf141Q5JVX7 400 aa24.68■■□□□ 1.54
VRK2-205ENST00000432057 STK31Q9BXU1 1019 aa24.68■■□□□ 1.54
VRK2-205ENST00000432057 SLAIN2Q9P270 581 aa24.68■■□□□ 1.54
VRK2-205ENST00000432057 SOS1Q07889 1333 aaPredicted RBP24.67■■□□□ 1.54
VRK2-205ENST00000432057 CCDC30Q5VVM6 783 aa24.66■■□□□ 1.54
VRK2-205ENST00000432057 NECTIN2Q92692 538 aa24.66■■□□□ 1.54
VRK2-205ENST00000432057 IPO9Q96P70 1041 aaKnown RBP24.66■■□□□ 1.54
VRK2-205ENST00000432057 NLRP2Q9NX02 1062 aa24.66■■□□□ 1.54
VRK2-205ENST00000432057 PKD1L3Q7Z443 1732 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms