RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 MEGF6O75095 1541 aa21.11■□□□□ 0.97
CSNK1E-208ENST00000431611 AKT1S1Q96B36 256 aa21.11■□□□□ 0.97
CSNK1E-208ENST00000431611 USHBP1Q8N6Y0 703 aa21.1■□□□□ 0.97
CSNK1E-208ENST00000431611 RAPGEF4Q8WZA2 1011 aa21.1■□□□□ 0.97
CSNK1E-208ENST00000431611 ARXQ96QS3 562 aa21.1■□□□□ 0.97
CSNK1E-208ENST00000431611 SMG6Q86US8 1419 aaKnown RBP21.1■□□□□ 0.97
CSNK1E-208ENST00000431611 CGNL1Q0VF96 1302 aa21.09■□□□□ 0.97
CSNK1E-208ENST00000431611 HSP90AB2PQ58FF8 381 aa21.08■□□□□ 0.97
CSNK1E-208ENST00000431611 KCNQ4P56696 695 aa21.07■□□□□ 0.96
CSNK1E-208ENST00000431611 SLC16A10Q8TF71 515 aa21.07■□□□□ 0.96
CSNK1E-208ENST00000431611 TIMELESSQ9UNS1 1208 aa21.07■□□□□ 0.96
CSNK1E-208ENST00000431611 INSRP06213 1382 aa21.07■□□□□ 0.96
CSNK1E-208ENST00000431611 TATP17735 454 aaPredicted RBP21.06■□□□□ 0.96
CSNK1E-208ENST00000431611 CARD14Q9BXL6 1004 aa21.06■□□□□ 0.96
CSNK1E-208ENST00000431611 TFCP2L1Q9NZI6 479 aa21.06■□□□□ 0.96
CSNK1E-208ENST00000431611 NSD2O96028 1365 aa21.06■□□□□ 0.96
CSNK1E-208ENST00000431611 FLT4P35916 1363 aa21.06■□□□□ 0.96
CSNK1E-208ENST00000431611 KIF24Q5T7B8 1368 aa21.05■□□□□ 0.96
CSNK1E-208ENST00000431611 PNPLA7Q6ZV29 1317 aa21.04■□□□□ 0.96
CSNK1E-208ENST00000431611 CCNL1Q9UK58 526 aaPredicted RBP21.04■□□□□ 0.96
CSNK1E-208ENST00000431611 KAT6BQ8WYB5 2073 aa21.04■□□□□ 0.96
CSNK1E-208ENST00000431611 RGPD2P0DJD1 1756 aa21.03■□□□□ 0.96
CSNK1E-208ENST00000431611 NSD3Q9BZ95 1437 aa21.03■□□□□ 0.96
CSNK1E-208ENST00000431611 DOT1LQ8TEK3 1739 aa21.02■□□□□ 0.96
CSNK1E-208ENST00000431611 POLD1P28340 1107 aa21.02■□□□□ 0.96
CSNK1E-208ENST00000431611 MAP3K5Q99683 1374 aa21.01■□□□□ 0.95
CSNK1E-208ENST00000431611 EMILIN1Q9Y6C2 1016 aa21.01■□□□□ 0.95
CSNK1E-208ENST00000431611 PCDH11XQ9BZA7 1347 aa21.01■□□□□ 0.95
CSNK1E-208ENST00000431611 PCDH11YQ9BZA8 1340 aa21.01■□□□□ 0.95
CSNK1E-208ENST00000431611 SHANK3Q9BYB0 1731 aa21.01■□□□□ 0.95
CSNK1E-208ENST00000431611 PPM1GO15355 546 aaPredicted RBP20.98■□□□□ 0.95
CSNK1E-208ENST00000431611 KLHL34Q8N239 644 aa20.98■□□□□ 0.95
CSNK1E-208ENST00000431611 PCGF6Q9BYE7 350 aa20.98■□□□□ 0.95
CSNK1E-208ENST00000431611 KIF20BQ96Q89 1820 aa20.98■□□□□ 0.95
CSNK1E-208ENST00000431611 CLSPNQ9HAW4 1339 aa20.98■□□□□ 0.95
CSNK1E-208ENST00000431611 CYP27B1O15528 508 aa20.97■□□□□ 0.95
CSNK1E-208ENST00000431611 MSH5O43196 834 aa20.96■□□□□ 0.95
CSNK1E-208ENST00000431611 MPRIPQ6WCQ1 1025 aa20.96■□□□□ 0.95
CSNK1E-208ENST00000431611 LY75O60449 1722 aa20.95■□□□□ 0.94
CSNK1E-208ENST00000431611 POLR3GLQ9BT43 218 aa20.95■□□□□ 0.94
CSNK1E-208ENST00000431611 HMGB2P26583 209 aaKnown RBP20.94■□□□□ 0.94
CSNK1E-208ENST00000431611 GPR162Q16538 588 aa20.94■□□□□ 0.94
CSNK1E-208ENST00000431611 COL23A1Q86Y22 540 aaPredicted RBP20.94■□□□□ 0.94
CSNK1E-208ENST00000431611 QSER1Q2KHR3 1735 aa20.94■□□□□ 0.94
CSNK1E-208ENST00000431611 WASHC2AQ641Q2 1341 aa20.94■□□□□ 0.94
CSNK1E-208ENST00000431611 ZNF784Q8NCA9 323 aaPredicted RBP20.93■□□□□ 0.94
CSNK1E-208ENST00000431611 PALLDQ8WX93 1383 aa20.93■□□□□ 0.94
CSNK1E-208ENST00000431611 SPG7Q9UQ90 795 aa20.92■□□□□ 0.94
CSNK1E-208ENST00000431611 NCAPD2Q15021 1401 aa20.91■□□□□ 0.94
CSNK1E-208ENST00000431611 SMARCC1Q92922 1105 aaPredicted RBP20.91■□□□□ 0.94
CSNK1E-208ENST00000431611 EYA1Q99502 592 aa20.91■□□□□ 0.94
CSNK1E-208ENST00000431611 POLKQ9UBT6 870 aa20.91■□□□□ 0.94
CSNK1E-208ENST00000431611 NKX1-1Q15270 411 aaPredicted RBP20.89■□□□□ 0.93
CSNK1E-208ENST00000431611 PELP1Q8IZL8 1130 aaKnown RBP20.89■□□□□ 0.93
CSNK1E-208ENST00000431611 FLAD1Q8NFF5 587 aa20.89■□□□□ 0.93
CSNK1E-208ENST00000431611 MSL1Q68DK7 614 aa20.88■□□□□ 0.93
CSNK1E-208ENST00000431611 NLGN2Q8NFZ4 835 aa20.88■□□□□ 0.93
CSNK1E-208ENST00000431611 PIGBQ92521 554 aa20.88■□□□□ 0.93
CSNK1E-208ENST00000431611 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.88■□□□□ 0.93
CSNK1E-208ENST00000431611 TUBGCP6Q96RT7 1819 aa20.88■□□□□ 0.93
CSNK1E-208ENST00000431611 COL24A1Q17RW2 1714 aa20.87■□□□□ 0.93
CSNK1E-208ENST00000431611 TNNT2P45379 298 aaPredicted RBP20.87■□□□□ 0.93
CSNK1E-208ENST00000431611 EIF4G2P78344 907 aaKnown RBP eCLIP20.87■□□□□ 0.93
CSNK1E-208ENST00000431611 UTRNP46939 3433 aa20.85■□□□□ 0.93
CSNK1E-208ENST00000431611 AK7Q96M32 723 aa20.85■□□□□ 0.93
CSNK1E-208ENST00000431611 PKD1L3Q7Z443 1732 aa20.84■□□□□ 0.93
CSNK1E-208ENST00000431611 HSPA5P11021 654 aaKnown RBP20.84■□□□□ 0.93
CSNK1E-208ENST00000431611 EIF4A2Q14240 407 aaKnown RBP20.84■□□□□ 0.93
CSNK1E-208ENST00000431611 IFNL2Q8IZJ0 200 aa20.84■□□□□ 0.93
CSNK1E-208ENST00000431611 ANKRD26Q9UPS8 1709 aa20.84■□□□□ 0.93
CSNK1E-208ENST00000431611 PHKG2P15735 406 aa20.83■□□□□ 0.93
CSNK1E-208ENST00000431611 TMOD3Q9NYL9 352 aa20.83■□□□□ 0.93
CSNK1E-208ENST00000431611 C5P01031 1676 aa20.83■□□□□ 0.92
CSNK1E-208ENST00000431611 TOGARAM1Q9Y4F4 1720 aa20.82■□□□□ 0.92
CSNK1E-208ENST00000431611 PANK3Q9H999 370 aa20.82■□□□□ 0.92
CSNK1E-208ENST00000431611 LOC102724428A0A0B4J2F2 783 aa20.81■□□□□ 0.92
CSNK1E-208ENST00000431611 SIK1P57059 783 aa20.81■□□□□ 0.92
CSNK1E-208ENST00000431611 PHF14O94880 888 aa20.8■□□□□ 0.92
CSNK1E-208ENST00000431611 ASAP1Q9ULH1 1129 aa20.8■□□□□ 0.92
CSNK1E-208ENST00000431611 CD2APQ9Y5K6 639 aa20.8■□□□□ 0.92
CSNK1E-208ENST00000431611 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.79■□□□□ 0.92
CSNK1E-208ENST00000431611 GRIN3BO60391 1043 aa20.79■□□□□ 0.92
CSNK1E-208ENST00000431611 AMIGO3Q86WK7 504 aa20.79■□□□□ 0.92
CSNK1E-208ENST00000431611 YBX3P16989 372 aaKnown RBP eCLIP20.78■□□□□ 0.923e-7■□□□□ 10.1
CSNK1E-208ENST00000431611 SMIM5Q71RC9 77 aa20.78■□□□□ 0.92
CSNK1E-208ENST00000431611 LINC00116Q8NCU8 138 aa20.78■□□□□ 0.92
CSNK1E-208ENST00000431611 CCER1Q8TC90 406 aaPredicted RBP20.78■□□□□ 0.92
CSNK1E-208ENST00000431611 MAP2P11137 1827 aaKnown RBP20.78■□□□□ 0.92
CSNK1E-208ENST00000431611 C4BP0C0L5 1744 aa20.78■□□□□ 0.92
CSNK1E-208ENST00000431611 IGSF1Q8N6C5 1336 aa20.78■□□□□ 0.92
CSNK1E-208ENST00000431611 CHD4Q14839 1912 aa20.77■□□□□ 0.92
CSNK1E-208ENST00000431611 PLEKHG2Q9H7P9 1386 aa20.77■□□□□ 0.92
CSNK1E-208ENST00000431611 ITGB4P16144 1822 aa20.77■□□□□ 0.92
CSNK1E-208ENST00000431611 SSFA2P28290 1259 aa20.77■□□□□ 0.92
CSNK1E-208ENST00000431611 ATP6V1AP38606 617 aa20.77■□□□□ 0.92
CSNK1E-208ENST00000431611 ITPK1Q13572 414 aa20.76■□□□□ 0.91
CSNK1E-208ENST00000431611 ATG3Q9NT62 314 aa20.76■□□□□ 0.91
CSNK1E-208ENST00000431611 MORC1Q86VD1 984 aa20.75■□□□□ 0.91
CSNK1E-208ENST00000431611 TAF1LQ8IZX4 1826 aa20.75■□□□□ 0.91
CSNK1E-208ENST00000431611 GNPATO15228 680 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms