RNA–Protein interactions for RNA: ENST00000431275.1

SPTLC3-202, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 2

Gene SPTLC3, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-202ENST00000431275 CCDC125Q86Z20 511 aa14.92□□□□□ -0.02
SPTLC3-202ENST00000431275 COL3A1P02461 1466 aaPredicted RBP14.92□□□□□ -0.02
SPTLC3-202ENST00000431275 MYBBP1AQ9BQG0 1328 aaKnown RBP14.92□□□□□ -0.02
SPTLC3-202ENST00000431275 U2SURPO15042 1029 aaKnown RBP14.91□□□□□ -0.02
SPTLC3-202ENST00000431275 TRIM37O94972 964 aa14.9□□□□□ -0.02
SPTLC3-202ENST00000431275 HMOX1P09601 288 aa14.9□□□□□ -0.02
SPTLC3-202ENST00000431275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.9□□□□□ -0.022e-6■■□□□ 11.6
SPTLC3-202ENST00000431275 SPG7Q9UQ90 795 aa14.9□□□□□ -0.02
SPTLC3-202ENST00000431275 NUDCQ9Y266 331 aa14.9□□□□□ -0.02
SPTLC3-202ENST00000431275 KDRP35968 1356 aa14.89□□□□□ -0.03
SPTLC3-202ENST00000431275 BCL9O00512 1426 aa14.89□□□□□ -0.03
SPTLC3-202ENST00000431275 RGPD1P0DJD0 1748 aa14.89□□□□□ -0.03
SPTLC3-202ENST00000431275 CYP27B1O15528 508 aa14.88□□□□□ -0.03
SPTLC3-202ENST00000431275 SF3B2Q13435 895 aaKnown RBP14.88□□□□□ -0.03
SPTLC3-202ENST00000431275 PLEKHO1Q53GL0 409 aaPredicted RBP14.88□□□□□ -0.03
SPTLC3-202ENST00000431275 PCDH11XQ9BZA7 1347 aa14.88□□□□□ -0.03
SPTLC3-202ENST00000431275 PCDH11YQ9BZA8 1340 aa14.88□□□□□ -0.03
SPTLC3-202ENST00000431275 AMOTQ4VCS5 1084 aa14.87□□□□□ -0.03
SPTLC3-202ENST00000431275 PLEKHG2Q9H7P9 1386 aa14.86□□□□□ -0.03
SPTLC3-202ENST00000431275 U2AF1L5P0DN76 240 aaPredicted RBP14.86□□□□□ -0.03
SPTLC3-202ENST00000431275 U2AF1Q01081 240 aaKnown RBP eCLIP14.86□□□□□ -0.03
SPTLC3-202ENST00000431275 ACSBG1Q96GR2 724 aa14.86□□□□□ -0.03
SPTLC3-202ENST00000431275 ANP32CO43423 234 aa14.85□□□□□ -0.03
SPTLC3-202ENST00000431275 KCNQ2O43526 872 aa14.85□□□□□ -0.03
SPTLC3-202ENST00000431275 PTF1AQ7RTS3 328 aa14.85□□□□□ -0.03
SPTLC3-202ENST00000431275 IFNL2Q8IZJ0 200 aa14.85□□□□□ -0.03
SPTLC3-202ENST00000431275 BCL11BQ9C0K0 894 aaPredicted RBP14.85□□□□□ -0.03
SPTLC3-202ENST00000431275 APBA3O96018 575 aa14.84□□□□□ -0.03
SPTLC3-202ENST00000431275 PHKG2P15735 406 aa14.84□□□□□ -0.03
SPTLC3-202ENST00000431275 NKX1-1Q15270 411 aaPredicted RBP14.84□□□□□ -0.03
SPTLC3-202ENST00000431275 DEFB132Q7Z7B7 95 aa14.84□□□□□ -0.03
SPTLC3-202ENST00000431275 PKD1L3Q7Z443 1732 aa14.83□□□□□ -0.03
SPTLC3-202ENST00000431275 SHANK3Q9BYB0 1731 aa14.83□□□□□ -0.03
SPTLC3-202ENST00000431275 FCHSD2O94868 740 aa14.83□□□□□ -0.04
SPTLC3-202ENST00000431275 BAG6P46379 1132 aa14.83□□□□□ -0.04
SPTLC3-202ENST00000431275 ZNF530Q6P9A1 599 aaPredicted RBP14.83□□□□□ -0.04
SPTLC3-202ENST00000431275 RSPH6AQ9H0K4 717 aa14.83□□□□□ -0.04
SPTLC3-202ENST00000431275 PRIM1P49642 420 aaKnown RBP14.82□□□□□ -0.04
SPTLC3-202ENST00000431275 EN1Q05925 392 aaPredicted RBP14.82□□□□□ -0.04
SPTLC3-202ENST00000431275 PRKAR2BP31323 418 aa14.81□□□□□ -0.04
SPTLC3-202ENST00000431275 MTHFSDQ2M296 383 aaKnown RBP14.81□□□□□ -0.04
SPTLC3-202ENST00000431275 C1orf141Q5JVX7 400 aa14.81□□□□□ -0.04
SPTLC3-202ENST00000431275 SYTL4Q96C24 671 aaPredicted RBP14.81□□□□□ -0.04
SPTLC3-202ENST00000431275 EP400Q96L91 3159 aa14.81□□□□□ -0.04
SPTLC3-202ENST00000431275 SBF2Q86WG5 1849 aa14.8□□□□□ -0.04
SPTLC3-202ENST00000431275 HSP90AB1P08238 724 aaKnown RBP14.8□□□□□ -0.04
SPTLC3-202ENST00000431275 PHACTR3Q96KR7 559 aa14.8□□□□□ -0.04
SPTLC3-202ENST00000431275 PLSCR1O15162 318 aa14.79□□□□□ -0.04
SPTLC3-202ENST00000431275 AKAP4Q5JQC9 854 aa14.79□□□□□ -0.04
SPTLC3-202ENST00000431275 DCAF5Q96JK2 942 aa14.79□□□□□ -0.04
SPTLC3-202ENST00000431275 CAMKK2Q96RR4 588 aa14.79□□□□□ -0.04
SPTLC3-202ENST00000431275 TNS1Q9HBL0 1735 aaKnown RBP14.78□□□□□ -0.04
SPTLC3-202ENST00000431275 EZH2Q15910 746 aaKnown RBP14.78□□□□□ -0.04
SPTLC3-202ENST00000431275 CCDC184Q52MB2 194 aa14.78□□□□□ -0.04
SPTLC3-202ENST00000431275 MPRIPQ6WCQ1 1025 aa14.78□□□□□ -0.04
SPTLC3-202ENST00000431275 GAS2L2Q8NHY3 880 aa14.78□□□□□ -0.04
SPTLC3-202ENST00000431275 PLEKHF1Q96S99 279 aa14.77□□□□□ -0.05
SPTLC3-202ENST00000431275 PNNQ9H307 717 aaKnown RBP14.77□□□□□ -0.05
SPTLC3-202ENST00000431275 NHSQ6T4R5 1651 aa14.77□□□□□ -0.05
SPTLC3-202ENST00000431275 ERVV-2B6SEH9 535 aa14.76□□□□□ -0.05
SPTLC3-202ENST00000431275 WDR43Q15061 677 aaKnown RBP eCLIP14.76□□□□□ -0.05
SPTLC3-202ENST00000431275 DOT1LQ8TEK3 1739 aa14.75□□□□□ -0.05
SPTLC3-202ENST00000431275 NEFMP07197 916 aa14.75□□□□□ -0.05
SPTLC3-202ENST00000431275 PIGBQ92521 554 aa14.75□□□□□ -0.05
SPTLC3-202ENST00000431275 LGR6Q9HBX8 967 aa14.75□□□□□ -0.05
SPTLC3-202ENST00000431275 TMOD3Q9NYL9 352 aa14.75□□□□□ -0.05
SPTLC3-202ENST00000431275 ADAMTS8Q9UP79 889 aa14.75□□□□□ -0.05
SPTLC3-202ENST00000431275 KDM6AO15550 1401 aaPredicted RBP14.75□□□□□ -0.05
SPTLC3-202ENST00000431275 GNAT3A8MTJ3 354 aa14.74□□□□□ -0.05
SPTLC3-202ENST00000431275 PROM2Q8N271 834 aa14.74□□□□□ -0.05
SPTLC3-202ENST00000431275 TOGARAM1Q9Y4F4 1720 aa14.73□□□□□ -0.05
SPTLC3-202ENST00000431275 RNMTO43148 476 aaKnown RBP14.73□□□□□ -0.05
SPTLC3-202ENST00000431275 CABP4P57796 275 aa14.73□□□□□ -0.05
SPTLC3-202ENST00000431275 MRS2Q9HD23 443 aa14.73□□□□□ -0.05
SPTLC3-202ENST00000431275 TXNRD1Q16881 649 aa14.72□□□□□ -0.05
SPTLC3-202ENST00000431275 NFATC2IPQ8NCF5 419 aa14.72□□□□□ -0.05
SPTLC3-202ENST00000431275 IL17REQ8NFR9 667 aa14.72□□□□□ -0.05
SPTLC3-202ENST00000431275 KAT6BQ8WYB5 2073 aa14.72□□□□□ -0.05
SPTLC3-202ENST00000431275 MAP3K5Q99683 1374 aa14.72□□□□□ -0.05
SPTLC3-202ENST00000431275 BTAF1O14981 1849 aa14.71□□□□□ -0.05
SPTLC3-202ENST00000431275 MAPK8IP3Q9UPT6 1336 aa14.71□□□□□ -0.05
SPTLC3-202ENST00000431275 DIEXFQ68CQ4 756 aaKnown RBP14.71□□□□□ -0.05
SPTLC3-202ENST00000431275 CCDC146Q8IYE0 955 aa14.71□□□□□ -0.05
SPTLC3-202ENST00000431275 PNISRQ8TF01 805 aaKnown RBP14.71□□□□□ -0.05
SPTLC3-202ENST00000431275 NFE2L2Q16236 605 aa14.7□□□□□ -0.06
SPTLC3-202ENST00000431275 SMARCC1Q92922 1105 aaPredicted RBP14.7□□□□□ -0.06
SPTLC3-202ENST00000431275 RUNDC1Q96C34 613 aa14.7□□□□□ -0.06
SPTLC3-202ENST00000431275 ASAP1Q9ULH1 1129 aa14.7□□□□□ -0.06
SPTLC3-202ENST00000431275 ITGB4P16144 1822 aa14.69□□□□□ -0.06
SPTLC3-202ENST00000431275 HTATSF1O43719 755 aaKnown RBP14.69□□□□□ -0.06
SPTLC3-202ENST00000431275 RTF1Q92541 710 aaKnown RBP14.69□□□□□ -0.06
SPTLC3-202ENST00000431275 SLC52A2Q9HAB3 445 aa14.69□□□□□ -0.06
SPTLC3-202ENST00000431275 ATG3Q9NT62 314 aa14.69□□□□□ -0.06
SPTLC3-202ENST00000431275 SLC27A3Q5K4L6 730 aa14.68□□□□□ -0.06
SPTLC3-202ENST00000431275 MCM10Q7L590 875 aa14.68□□□□□ -0.06
SPTLC3-202ENST00000431275 LRRC4BQ9NT99 713 aa14.68□□□□□ -0.06
SPTLC3-202ENST00000431275 PALLDQ8WX93 1383 aa14.68□□□□□ -0.06
SPTLC3-202ENST00000431275 TMPOP42166 694 aaKnown RBP14.67□□□□□ -0.06
SPTLC3-202ENST00000431275 KCNQ4P56696 695 aa14.67□□□□□ -0.06
SPTLC3-202ENST00000431275 TEFQ10587 303 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms