RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 KCNQ4P56696 695 aa31.3■■■□□ 2.6
PTPRA-207ENST00000431048 ZCRB1Q8TBF4 217 aaKnown RBP31.3■■■□□ 2.6
PTPRA-207ENST00000431048 NLGN2Q8NFZ4 835 aa31.29■■■□□ 2.6
PTPRA-207ENST00000431048 GRIN3BO60391 1043 aa31.28■■■□□ 2.6
PTPRA-207ENST00000431048 HOXC9P31274 260 aa31.28■■■□□ 2.6
PTPRA-207ENST00000431048 PELP1Q8IZL8 1130 aaKnown RBP31.28■■■□□ 2.6
PTPRA-207ENST00000431048 MAP3K19Q56UN5 1328 aa31.27■■■□□ 2.6
PTPRA-207ENST00000431048 COG3Q96JB2 828 aa31.27■■■□□ 2.6
PTPRA-207ENST00000431048 LY75O60449 1722 aa31.27■■■□□ 2.6
PTPRA-207ENST00000431048 CCNL1Q9UK58 526 aaPredicted RBP31.26■■■□□ 2.59
PTPRA-207ENST00000431048 TUBGCP6Q96RT7 1819 aa31.25■■■□□ 2.59
PTPRA-207ENST00000431048 AMPHP49418 695 aa31.24■■■□□ 2.59
PTPRA-207ENST00000431048 COL23A1Q86Y22 540 aaPredicted RBP31.22■■■□□ 2.59
PTPRA-207ENST00000431048 CGNL1Q0VF96 1302 aa31.22■■■□□ 2.59
PTPRA-207ENST00000431048 YBX3P16989 372 aaKnown RBP eCLIP31.21■■■□□ 2.59
PTPRA-207ENST00000431048 HMGB2P26583 209 aaKnown RBP31.21■■■□□ 2.59
PTPRA-207ENST00000431048 DOT1LQ8TEK3 1739 aa31.21■■■□□ 2.59
PTPRA-207ENST00000431048 MEGF6O75095 1541 aa31.19■■■□□ 2.58
PTPRA-207ENST00000431048 USP47Q96K76 1375 aa31.19■■■□□ 2.58
PTPRA-207ENST00000431048 SHANK3Q9BYB0 1731 aa31.19■■■□□ 2.58
PTPRA-207ENST00000431048 SLC24A1O60721 1099 aa31.19■■■□□ 2.58
PTPRA-207ENST00000431048 FBLN1P23142 703 aa31.18■■■□□ 2.58
PTPRA-207ENST00000431048 TESK2Q96S53 571 aa31.18■■■□□ 2.58
PTPRA-207ENST00000431048 RTL1A6NKG5 1358 aa31.17■■■□□ 2.58
PTPRA-207ENST00000431048 MSH5O43196 834 aa31.16■■■□□ 2.58
PTPRA-207ENST00000431048 NBPF6Q5VWK0 638 aa31.16■■■□□ 2.58
PTPRA-207ENST00000431048 NBPF4Q96M43 638 aa31.16■■■□□ 2.58
PTPRA-207ENST00000431048 CD2APQ9Y5K6 639 aa31.15■■■□□ 2.58
PTPRA-207ENST00000431048 FLAD1Q8NFF5 587 aa31.14■■■□□ 2.58
PTPRA-207ENST00000431048 CEP350Q5VT06 3117 aa31.13■■■□□ 2.57
PTPRA-207ENST00000431048 RAPGEF4Q8WZA2 1011 aa31.12■■■□□ 2.57
PTPRA-207ENST00000431048 RGPD2P0DJD1 1756 aa31.12■■■□□ 2.57
PTPRA-207ENST00000431048 IFFO2Q5TF58 517 aa31.11■■■□□ 2.57
PTPRA-207ENST00000431048 ST20-MTHFSA0A0A6YYL1 179 aa31.1■■■□□ 2.57
PTPRA-207ENST00000431048 TATP17735 454 aaPredicted RBP31.08■■■□□ 2.57
PTPRA-207ENST00000431048 RRS1Q15050 365 aaKnown RBP31.08■■■□□ 2.57
PTPRA-207ENST00000431048 MSL1Q68DK7 614 aa31.08■■■□□ 2.57
PTPRA-207ENST00000431048 FYB1O15117 783 aa31.07■■■□□ 2.56
PTPRA-207ENST00000431048 USHBP1Q8N6Y0 703 aa31.06■■■□□ 2.56
PTPRA-207ENST00000431048 SMG6Q86US8 1419 aaKnown RBP31.06■■■□□ 2.56
PTPRA-207ENST00000431048 ATP10DQ9P241 1426 aa31.06■■■□□ 2.56
PTPRA-207ENST00000431048 TONSLQ96HA7 1378 aa31.05■■■□□ 2.56
PTPRA-207ENST00000431048 PCDH11XQ9BZA7 1347 aa31.05■■■□□ 2.56
PTPRA-207ENST00000431048 PCDH11YQ9BZA8 1340 aa31.05■■■□□ 2.56
PTPRA-207ENST00000431048 INSRP06213 1382 aa31.03■■■□□ 2.56
PTPRA-207ENST00000431048 PALLDQ8WX93 1383 aa31.03■■■□□ 2.56
PTPRA-207ENST00000431048 C5P01031 1676 aa31.02■■■□□ 2.56
PTPRA-207ENST00000431048 SMARCC1Q92922 1105 aaPredicted RBP31.01■■■□□ 2.55
PTPRA-207ENST00000431048 GGNBP2Q9H3C7 697 aa31.01■■■□□ 2.55
PTPRA-207ENST00000431048 KIF24Q5T7B8 1368 aa31.01■■■□□ 2.55
PTPRA-207ENST00000431048 HSP90AB2PQ58FF8 381 aa31■■■□□ 2.55
PTPRA-207ENST00000431048 MPRIPQ6WCQ1 1025 aa31■■■□□ 2.55
PTPRA-207ENST00000431048 GPBP1L1Q9HC44 474 aaPredicted RBP30.99■■■□□ 2.55
PTPRA-207ENST00000431048 ADCY9O60503 1353 aa30.99■■■□□ 2.55
PTPRA-207ENST00000431048 CYP27B1O15528 508 aa30.98■■■□□ 2.55
PTPRA-207ENST00000431048 TAF1LQ8IZX4 1826 aa30.96■■■□□ 2.55
PTPRA-207ENST00000431048 FLT4P35916 1363 aa30.96■■■□□ 2.55
PTPRA-207ENST00000431048 AK7Q96M32 723 aa30.95■■■□□ 2.55
PTPRA-207ENST00000431048 NKX1-1Q15270 411 aaPredicted RBP30.94■■■□□ 2.54
PTPRA-207ENST00000431048 NSD3Q9BZ95 1437 aa30.93■■■□□ 2.54
PTPRA-207ENST00000431048 TMF1P82094 1093 aa30.93■■■□□ 2.54
PTPRA-207ENST00000431048 C4BP0C0L5 1744 aa30.93■■■□□ 2.54
PTPRA-207ENST00000431048 AMIGO3Q86WK7 504 aa30.92■■■□□ 2.54
PTPRA-207ENST00000431048 HSPA6P17066 643 aa30.91■■■□□ 2.54
PTPRA-207ENST00000431048 PIGBQ92521 554 aa30.91■■■□□ 2.54
PTPRA-207ENST00000431048 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.9■■■□□ 2.54
PTPRA-207ENST00000431048 SSFA2P28290 1259 aa30.9■■■□□ 2.54
PTPRA-207ENST00000431048 IGSF1Q8N6C5 1336 aa30.9■■■□□ 2.54
PTPRA-207ENST00000431048 NCAPD2Q15021 1401 aa30.87■■■□□ 2.53
PTPRA-207ENST00000431048 TOGARAM1Q9Y4F4 1720 aa30.86■■■□□ 2.53
PTPRA-207ENST00000431048 ITGB4P16144 1822 aa30.86■■■□□ 2.53
PTPRA-207ENST00000431048 UBR3Q6ZT12 1888 aa30.85■■■□□ 2.53
PTPRA-207ENST00000431048 LOC102724428A0A0B4J2F2 783 aa30.85■■■□□ 2.53
PTPRA-207ENST00000431048 PHF14O94880 888 aa30.85■■■□□ 2.53
PTPRA-207ENST00000431048 SIK1P57059 783 aa30.85■■■□□ 2.53
PTPRA-207ENST00000431048 CDCA8Q53HL2 280 aa30.85■■■□□ 2.53
PTPRA-207ENST00000431048 SPG7Q9UQ90 795 aa30.85■■■□□ 2.53
PTPRA-207ENST00000431048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.84■■■□□ 2.533e-10■■■□□ 17.8
PTPRA-207ENST00000431048 PKD1L3Q7Z443 1732 aa30.84■■■□□ 2.53
PTPRA-207ENST00000431048 LINC00116Q8NCU8 138 aa30.83■■■□□ 2.53
PTPRA-207ENST00000431048 ZNF526Q8TF50 670 aaPredicted RBP30.83■■■□□ 2.53
PTPRA-207ENST00000431048 SMIM5Q71RC9 77 aa30.82■■■□□ 2.52
PTPRA-207ENST00000431048 EMILIN1Q9Y6C2 1016 aa30.82■■■□□ 2.52
PTPRA-207ENST00000431048 MAP2P11137 1827 aaKnown RBP30.81■■■□□ 2.52
PTPRA-207ENST00000431048 CARD14Q9BXL6 1004 aa30.79■■■□□ 2.52
PTPRA-207ENST00000431048 KIF20BQ96Q89 1820 aa30.79■■■□□ 2.52
PTPRA-207ENST00000431048 KIF3CO14782 793 aa30.78■■■□□ 2.52
PTPRA-207ENST00000431048 TMOD3Q9NYL9 352 aa30.78■■■□□ 2.52
PTPRA-207ENST00000431048 WASHC2AQ641Q2 1341 aa30.77■■■□□ 2.52
PTPRA-207ENST00000431048 ITPK1Q13572 414 aa30.76■■■□□ 2.51
PTPRA-207ENST00000431048 ASAP1Q9ULH1 1129 aa30.76■■■□□ 2.51
PTPRA-207ENST00000431048 GNPATO15228 680 aa30.75■■■□□ 2.51
PTPRA-207ENST00000431048 EYA1Q99502 592 aa30.75■■■□□ 2.51
PTPRA-207ENST00000431048 WWC3Q9ULE0 1092 aa30.75■■■□□ 2.51
PTPRA-207ENST00000431048 ATP6V1AP38606 617 aa30.74■■■□□ 2.51
PTPRA-207ENST00000431048 IFNL2Q8IZJ0 200 aa30.74■■■□□ 2.51
PTPRA-207ENST00000431048 CICQ96RK0 1608 aaPredicted RBP30.73■■■□□ 2.51
PTPRA-207ENST00000431048 TGFB2P61812 414 aa30.73■■■□□ 2.51
PTPRA-207ENST00000431048 MMP10P09238 476 aa30.72■■■□□ 2.51
PTPRA-207ENST00000431048 PHKG2P15735 406 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms