RNA–Protein interactions for RNA: ENST00000430589.1

AC055876.1-201, humanhuman

TSL 2 BASIC

Gene AC055876.1, Length 895 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.1-201ENST00000430589 KCNQ4P56696 695 aa32.6■■■□□ 2.81
AC055876.1-201ENST00000430589 TMF1P82094 1093 aa32.6■■■□□ 2.81
AC055876.1-201ENST00000430589 PNPLA7Q6ZV29 1317 aa32.58■■■□□ 2.81
AC055876.1-201ENST00000430589 UTRNP46939 3433 aa32.58■■■□□ 2.81
AC055876.1-201ENST00000430589 RRS1Q15050 365 aaKnown RBP32.58■■■□□ 2.81
AC055876.1-201ENST00000430589 RAPGEF4Q8WZA2 1011 aa32.58■■■□□ 2.81
AC055876.1-201ENST00000430589 GGNBP2Q9H3C7 697 aa32.57■■■□□ 2.8
AC055876.1-201ENST00000430589 CCNL1Q9UK58 526 aaPredicted RBP32.57■■■□□ 2.8
AC055876.1-201ENST00000430589 RTL1A6NKG5 1358 aa32.57■■■□□ 2.8
AC055876.1-201ENST00000430589 CGNL1Q0VF96 1302 aa32.55■■■□□ 2.8
AC055876.1-201ENST00000430589 SMG6Q86US8 1419 aaKnown RBP32.55■■■□□ 2.8
AC055876.1-201ENST00000430589 FYB1O15117 783 aa32.55■■■□□ 2.8
AC055876.1-201ENST00000430589 MSH5O43196 834 aa32.55■■■□□ 2.8
AC055876.1-201ENST00000430589 NBPF6Q5VWK0 638 aa32.55■■■□□ 2.8
AC055876.1-201ENST00000430589 NBPF4Q96M43 638 aa32.55■■■□□ 2.8
AC055876.1-201ENST00000430589 PELP1Q8IZL8 1130 aaKnown RBP32.53■■■□□ 2.8
AC055876.1-201ENST00000430589 USHBP1Q8N6Y0 703 aa32.53■■■□□ 2.8
AC055876.1-201ENST00000430589 USP47Q96K76 1375 aa32.53■■■□□ 2.8
AC055876.1-201ENST00000430589 MEGF6O75095 1541 aa32.52■■■□□ 2.8
AC055876.1-201ENST00000430589 CHD4Q14839 1912 aa32.52■■■□□ 2.8
AC055876.1-201ENST00000430589 TATP17735 454 aaPredicted RBP32.52■■■□□ 2.8
AC055876.1-201ENST00000430589 CDCA8Q53HL2 280 aa32.5■■■□□ 2.79
AC055876.1-201ENST00000430589 DOT1LQ8TEK3 1739 aa32.49■■■□□ 2.79
AC055876.1-201ENST00000430589 NSD2O96028 1365 aa32.49■■■□□ 2.79
AC055876.1-201ENST00000430589 HMGB2P26583 209 aaKnown RBP32.49■■■□□ 2.79
AC055876.1-201ENST00000430589 QSER1Q2KHR3 1735 aa32.48■■■□□ 2.79
AC055876.1-201ENST00000430589 RGPD2P0DJD1 1756 aa32.47■■■□□ 2.79
AC055876.1-201ENST00000430589 HSP90AB2PQ58FF8 381 aa32.45■■■□□ 2.79
AC055876.1-201ENST00000430589 PCDH11XQ9BZA7 1347 aa32.43■■■□□ 2.78
AC055876.1-201ENST00000430589 PCDH11YQ9BZA8 1340 aa32.43■■■□□ 2.78
AC055876.1-201ENST00000430589 INSRP06213 1382 aa32.43■■■□□ 2.78
AC055876.1-201ENST00000430589 LY75O60449 1722 aa32.43■■■□□ 2.78
AC055876.1-201ENST00000430589 COL23A1Q86Y22 540 aaPredicted RBP32.42■■■□□ 2.78
AC055876.1-201ENST00000430589 FLT4P35916 1363 aa32.41■■■□□ 2.78
AC055876.1-201ENST00000430589 SHANK3Q9BYB0 1731 aa32.4■■■□□ 2.78
AC055876.1-201ENST00000430589 NLGN2Q8NFZ4 835 aa32.4■■■□□ 2.78
AC055876.1-201ENST00000430589 MPRIPQ6WCQ1 1025 aa32.39■■■□□ 2.78
AC055876.1-201ENST00000430589 KIF24Q5T7B8 1368 aa32.38■■■□□ 2.77
AC055876.1-201ENST00000430589 C1QTNF8P60827 252 aa32.38■■■□□ 2.77
AC055876.1-201ENST00000430589 FLAD1Q8NFF5 587 aa32.38■■■□□ 2.77
AC055876.1-201ENST00000430589 TUBGCP6Q96RT7 1819 aa32.37■■■□□ 2.77
AC055876.1-201ENST00000430589 GRIN3BO60391 1043 aa32.37■■■□□ 2.77
AC055876.1-201ENST00000430589 SENP3-EIF4A1A0A087X0R7 540 aa32.36■■■□□ 2.77
AC055876.1-201ENST00000430589 MSL1Q68DK7 614 aa32.36■■■□□ 2.77
AC055876.1-201ENST00000430589 COL24A1Q17RW2 1714 aa32.34■■■□□ 2.77
AC055876.1-201ENST00000430589 PPM1GO15355 546 aaPredicted RBP32.34■■■□□ 2.77
AC055876.1-201ENST00000430589 SMARCC1Q92922 1105 aaPredicted RBP32.34■■■□□ 2.77
AC055876.1-201ENST00000430589 PALLDQ8WX93 1383 aa32.33■■■□□ 2.77
AC055876.1-201ENST00000430589 CYP27B1O15528 508 aa32.32■■■□□ 2.76
AC055876.1-201ENST00000430589 CARD14Q9BXL6 1004 aa32.31■■■□□ 2.76
AC055876.1-201ENST00000430589 EMILIN1Q9Y6C2 1016 aa32.31■■■□□ 2.76
AC055876.1-201ENST00000430589 GIGYF1O75420 1035 aaPredicted RBP32.3■■■□□ 2.76
AC055876.1-201ENST00000430589 AK7Q96M32 723 aa32.29■■■□□ 2.76
AC055876.1-201ENST00000430589 SPG7Q9UQ90 795 aa32.29■■■□□ 2.76
AC055876.1-201ENST00000430589 KIF20BQ96Q89 1820 aa32.28■■■□□ 2.76
AC055876.1-201ENST00000430589 GOLGB1Q14789 3259 aaKnown RBP32.28■■■□□ 2.76
AC055876.1-201ENST00000430589 TRIM26Q12899 539 aaPredicted RBP32.28■■■□□ 2.76
AC055876.1-201ENST00000430589 NSD3Q9BZ95 1437 aa32.27■■■□□ 2.76
AC055876.1-201ENST00000430589 YBX3P16989 372 aaKnown RBP eCLIP32.26■■■□□ 2.75
AC055876.1-201ENST00000430589 CD2APQ9Y5K6 639 aa32.26■■■□□ 2.75
AC055876.1-201ENST00000430589 PIGBQ92521 554 aa32.23■■■□□ 2.75
AC055876.1-201ENST00000430589 C5P01031 1676 aa32.23■■■□□ 2.75
AC055876.1-201ENST00000430589 PHF14O94880 888 aa32.21■■■□□ 2.75
AC055876.1-201ENST00000430589 NKX1-1Q15270 411 aaPredicted RBP32.21■■■□□ 2.75
AC055876.1-201ENST00000430589 WASHC2AQ641Q2 1341 aa32.2■■■□□ 2.74
AC055876.1-201ENST00000430589 EYA1Q99502 592 aa32.18■■■□□ 2.74
AC055876.1-201ENST00000430589 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.18■■■□□ 2.74
AC055876.1-201ENST00000430589 TMOD3Q9NYL9 352 aa32.18■■■□□ 2.74
AC055876.1-201ENST00000430589 POLR3GLQ9BT43 218 aa32.17■■■□□ 2.74
AC055876.1-201ENST00000430589 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.16■■■□□ 2.74
AC055876.1-201ENST00000430589 LOC102724428A0A0B4J2F2 783 aa32.16■■■□□ 2.74
AC055876.1-201ENST00000430589 SIK1P57059 783 aa32.16■■■□□ 2.74
AC055876.1-201ENST00000430589 TIMELESSQ9UNS1 1208 aa32.16■■■□□ 2.74
AC055876.1-201ENST00000430589 TAF1LQ8IZX4 1826 aa32.15■■■□□ 2.74
AC055876.1-201ENST00000430589 IFNL2Q8IZJ0 200 aa32.15■■■□□ 2.74
AC055876.1-201ENST00000430589 ITGB4P16144 1822 aa32.14■■■□□ 2.74
AC055876.1-201ENST00000430589 SSFA2P28290 1259 aa32.14■■■□□ 2.74
AC055876.1-201ENST00000430589 C4BP0C0L5 1744 aa32.14■■■□□ 2.74
AC055876.1-201ENST00000430589 PKD1L3Q7Z443 1732 aa32.12■■■□□ 2.73
AC055876.1-201ENST00000430589 NCAPD2Q15021 1401 aa32.12■■■□□ 2.73
AC055876.1-201ENST00000430589 SMIM5Q71RC9 77 aa32.12■■■□□ 2.73
AC055876.1-201ENST00000430589 POLKQ9UBT6 870 aa32.12■■■□□ 2.73
AC055876.1-201ENST00000430589 AMIGO3Q86WK7 504 aa32.11■■■□□ 2.73
AC055876.1-201ENST00000430589 ASAP1Q9ULH1 1129 aa32.11■■■□□ 2.73
AC055876.1-201ENST00000430589 TOGARAM1Q9Y4F4 1720 aa32.11■■■□□ 2.73
AC055876.1-201ENST00000430589 PHKG2P15735 406 aa32.1■■■□□ 2.73
AC055876.1-201ENST00000430589 ATP6V1AP38606 617 aa32.1■■■□□ 2.73
AC055876.1-201ENST00000430589 TNNT2P45379 298 aaPredicted RBP32.1■■■□□ 2.73
AC055876.1-201ENST00000430589 LINC00116Q8NCU8 138 aa32.1■■■□□ 2.73
AC055876.1-201ENST00000430589 GNPATO15228 680 aa32.08■■■□□ 2.73
AC055876.1-201ENST00000430589 MAP2P11137 1827 aaKnown RBP32.07■■■□□ 2.73
AC055876.1-201ENST00000430589 IGSF1Q8N6C5 1336 aa32.06■■■□□ 2.72
AC055876.1-201ENST00000430589 GPBP1L1Q9HC44 474 aaPredicted RBP32.06■■■□□ 2.72
AC055876.1-201ENST00000430589 EIF4A2Q14240 407 aaKnown RBP32.05■■■□□ 2.72
AC055876.1-201ENST00000430589 ATP10DQ9P241 1426 aa32.05■■■□□ 2.72
AC055876.1-201ENST00000430589 ITPK1Q13572 414 aa32.04■■■□□ 2.72
AC055876.1-201ENST00000430589 ATG3Q9NT62 314 aa32.04■■■□□ 2.72
AC055876.1-201ENST00000430589 WWC3Q9ULE0 1092 aa32.04■■■□□ 2.72
AC055876.1-201ENST00000430589 UBR3Q6ZT12 1888 aa32.03■■■□□ 2.72
AC055876.1-201ENST00000430589 ANKRD26Q9UPS8 1709 aa32.01■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms