RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 SRCAPQ6ZRS2 3230 aa23.75■■□□□ 1.39
CTSD-203ENST00000429746 APBA3O96018 575 aa23.75■■□□□ 1.39
CTSD-203ENST00000429746 IGSF1Q8N6C5 1336 aa23.75■■□□□ 1.39
CTSD-203ENST00000429746 RREB1Q92766 1687 aa23.73■■□□□ 1.39
CTSD-203ENST00000429746 MTHFSP49914 203 aa23.73■■□□□ 1.39
CTSD-203ENST00000429746 IL13P35225 146 aa23.72■■□□□ 1.39
CTSD-203ENST00000429746 EZH2Q15910 746 aaKnown RBP23.72■■□□□ 1.39
CTSD-203ENST00000429746 RGPD3A6NKT7 1758 aaPredicted RBP23.72■■□□□ 1.39
CTSD-203ENST00000429746 RGPD4Q7Z3J3 1758 aa23.72■■□□□ 1.39
CTSD-203ENST00000429746 DOT1LQ8TEK3 1739 aa23.7■■□□□ 1.39
CTSD-203ENST00000429746 TOGARAM1Q9Y4F4 1720 aa23.7■■□□□ 1.38
CTSD-203ENST00000429746 KDRP35968 1356 aa23.68■■□□□ 1.38
CTSD-203ENST00000429746 ZCRB1Q8TBF4 217 aaKnown RBP23.68■■□□□ 1.38
CTSD-203ENST00000429746 BTAF1O14981 1849 aa23.67■■□□□ 1.38
CTSD-203ENST00000429746 NUP188Q5SRE5 1749 aa23.67■■□□□ 1.38
CTSD-203ENST00000429746 LRP5O75197 1615 aa23.66■■□□□ 1.38
CTSD-203ENST00000429746 PLSCR1O15162 318 aa23.66■■□□□ 1.38
CTSD-203ENST00000429746 KCNQ2O43526 872 aa23.66■■□□□ 1.38
CTSD-203ENST00000429746 CNGB1Q14028 1251 aaPredicted RBP23.66■■□□□ 1.38
CTSD-203ENST00000429746 AEBP1Q8IUX7 1158 aa23.66■■□□□ 1.38
CTSD-203ENST00000429746 RAPGEF4Q8WZA2 1011 aa23.66■■□□□ 1.38
CTSD-203ENST00000429746 PLEKHG2Q9H7P9 1386 aa23.65■■□□□ 1.38
CTSD-203ENST00000429746 CYP27B1O15528 508 aa23.65■■□□□ 1.38
CTSD-203ENST00000429746 TATP17735 454 aaPredicted RBP23.65■■□□□ 1.38
CTSD-203ENST00000429746 BCL11BQ9C0K0 894 aaPredicted RBP23.65■■□□□ 1.38
CTSD-203ENST00000429746 DDX10Q13206 875 aaKnown RBP23.64■■□□□ 1.37
CTSD-203ENST00000429746 NBPF14Q5TI25 921 aa23.64■■□□□ 1.37
CTSD-203ENST00000429746 DDX54Q8TDD1 881 aaKnown RBP23.64■■□□□ 1.37
CTSD-203ENST00000429746 PSDA5PKW4 1024 aaPredicted RBP23.63■■□□□ 1.37
CTSD-203ENST00000429746 PPP2R1AP30153 589 aa23.63■■□□□ 1.37
CTSD-203ENST00000429746 KAT6BQ8WYB5 2073 aa23.61■■□□□ 1.37
CTSD-203ENST00000429746 R3HDM1Q15032 1099 aaKnown RBP23.61■■□□□ 1.37
CTSD-203ENST00000429746 ACSBG1Q96GR2 724 aa23.61■■□□□ 1.37
CTSD-203ENST00000429746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.6■■□□□ 1.37
CTSD-203ENST00000429746 ITGB4P16144 1822 aa23.6■■□□□ 1.37
CTSD-203ENST00000429746 PCDH11XQ9BZA7 1347 aa23.59■■□□□ 1.37
CTSD-203ENST00000429746 PCDH11YQ9BZA8 1340 aa23.59■■□□□ 1.37
CTSD-203ENST00000429746 PROM2Q8N271 834 aa23.59■■□□□ 1.37
CTSD-203ENST00000429746 NKX1-1Q15270 411 aaPredicted RBP23.57■■□□□ 1.36
CTSD-203ENST00000429746 DIAPH1O60610 1272 aaKnown RBP23.56■■□□□ 1.36
CTSD-203ENST00000429746 SULT6B1Q6IMI4 303 aa23.56■■□□□ 1.36
CTSD-203ENST00000429746 LY75O60449 1722 aa23.56■■□□□ 1.36
CTSD-203ENST00000429746 PAPPAQ13219 1627 aa23.55■■□□□ 1.36
CTSD-203ENST00000429746 PHKG2P15735 406 aa23.54■■□□□ 1.36
CTSD-203ENST00000429746 PRIM1P49642 420 aaKnown RBP23.53■■□□□ 1.36
CTSD-203ENST00000429746 SPG7Q9UQ90 795 aa23.52■■□□□ 1.36
CTSD-203ENST00000429746 KDM6AO15550 1401 aaPredicted RBP23.51■■□□□ 1.35
CTSD-203ENST00000429746 ADAMTS7Q9UKP4 1686 aa23.51■■□□□ 1.35
CTSD-203ENST00000429746 HMOX1P09601 288 aa23.5■■□□□ 1.35
CTSD-203ENST00000429746 VIRMAQ69YN4 1812 aaKnown RBP23.49■■□□□ 1.35
CTSD-203ENST00000429746 SCN11AQ9UI33 1791 aa23.48■■□□□ 1.35
CTSD-203ENST00000429746 ZNF316A6NFI3 1004 aaPredicted RBP23.48■■□□□ 1.35
CTSD-203ENST00000429746 IFNL2Q8IZJ0 200 aa23.48■■□□□ 1.35
CTSD-203ENST00000429746 TXNRD1Q16881 649 aa23.46■■□□□ 1.35
CTSD-203ENST00000429746 AMOTQ4VCS5 1084 aa23.46■■□□□ 1.35
CTSD-203ENST00000429746 PLEKHO1Q53GL0 409 aaPredicted RBP23.46■■□□□ 1.35
CTSD-203ENST00000429746 ANO8Q9HCE9 1232 aaPredicted RBP23.46■■□□□ 1.35
CTSD-203ENST00000429746 RALBP1Q15311 655 aa23.45■■□□□ 1.34
CTSD-203ENST00000429746 LRRC4BQ9NT99 713 aa23.45■■□□□ 1.34
CTSD-203ENST00000429746 ZNF530Q6P9A1 599 aaPredicted RBP23.44■■□□□ 1.34
CTSD-203ENST00000429746 RSPH6AQ9H0K4 717 aa23.44■■□□□ 1.34
CTSD-203ENST00000429746 SYTL4Q96C24 671 aaPredicted RBP23.43■■□□□ 1.34
CTSD-203ENST00000429746 CFAP53Q96M91 514 aa23.43■■□□□ 1.34
CTSD-203ENST00000429746 U2SURPO15042 1029 aaKnown RBP23.42■■□□□ 1.34
CTSD-203ENST00000429746 MTHFSDQ2M296 383 aaKnown RBP23.42■■□□□ 1.34
CTSD-203ENST00000429746 PIGBQ92521 554 aa23.42■■□□□ 1.34
CTSD-203ENST00000429746 PRKRIP1Q9H875 184 aaPredicted RBP23.42■■□□□ 1.34
CTSD-203ENST00000429746 TAF1LQ8IZX4 1826 aa23.41■■□□□ 1.34
CTSD-203ENST00000429746 SPON1Q9HCB6 807 aa23.41■■□□□ 1.34
CTSD-203ENST00000429746 CASZ1Q86V15 1759 aa23.41■■□□□ 1.34
CTSD-203ENST00000429746 MRC1P22897 1456 aa23.41■■□□□ 1.34
CTSD-203ENST00000429746 TUBGCP6Q96RT7 1819 aa23.4■■□□□ 1.34
CTSD-203ENST00000429746 MYBBP1AQ9BQG0 1328 aaKnown RBP23.39■■□□□ 1.34
CTSD-203ENST00000429746 MPRIPQ6WCQ1 1025 aa23.39■■□□□ 1.33
CTSD-203ENST00000429746 DCAF5Q96JK2 942 aa23.39■■□□□ 1.33
CTSD-203ENST00000429746 PHACTR3Q96KR7 559 aa23.39■■□□□ 1.33
CTSD-203ENST00000429746 STK32BQ9NY57 414 aa23.39■■□□□ 1.33
CTSD-203ENST00000429746 SLC15A2Q16348 729 aa23.37■■□□□ 1.33
CTSD-203ENST00000429746 AKAP4Q5JQC9 854 aa23.37■■□□□ 1.33
CTSD-203ENST00000429746 SIPA1L3O60292 1781 aaPredicted RBP23.37■■□□□ 1.33
CTSD-203ENST00000429746 C5P01031 1676 aa23.36■■□□□ 1.33
CTSD-203ENST00000429746 ERVV-2B6SEH9 535 aa23.36■■□□□ 1.33
CTSD-203ENST00000429746 PRKAR2BP31323 418 aa23.36■■□□□ 1.33
CTSD-203ENST00000429746 KCNQ4P56696 695 aa23.36■■□□□ 1.33
CTSD-203ENST00000429746 PALLDQ8WX93 1383 aa23.36■■□□□ 1.33
CTSD-203ENST00000429746 QSER1Q2KHR3 1735 aa23.36■■□□□ 1.33
CTSD-203ENST00000429746 HSP90AB1P08238 724 aaKnown RBP23.35■■□□□ 1.33
CTSD-203ENST00000429746 LGR6Q9HBX8 967 aa23.35■■□□□ 1.33
CTSD-203ENST00000429746 ZNF831Q5JPB2 1677 aa23.35■■□□□ 1.33
CTSD-203ENST00000429746 U2AF1L5P0DN76 240 aaPredicted RBP23.34■■□□□ 1.33
CTSD-203ENST00000429746 U2AF1Q01081 240 aaKnown RBP eCLIP23.34■■□□□ 1.33
CTSD-203ENST00000429746 ZNF827Q17R98 1081 aa23.34■■□□□ 1.33
CTSD-203ENST00000429746 SLC27A3Q5K4L6 730 aa23.34■■□□□ 1.33
CTSD-203ENST00000429746 ASAP1Q9ULH1 1129 aa23.34■■□□□ 1.33
CTSD-203ENST00000429746 NUDCQ9Y266 331 aa23.34■■□□□ 1.33
CTSD-203ENST00000429746 FCHSD2O94868 740 aa23.33■■□□□ 1.33
CTSD-203ENST00000429746 AKT1S1Q96B36 256 aa23.33■■□□□ 1.33
CTSD-203ENST00000429746 PLEKHF1Q96S99 279 aa23.33■■□□□ 1.33
CTSD-203ENST00000429746 ATG3Q9NT62 314 aa23.33■■□□□ 1.33
CTSD-203ENST00000429746 DLG5Q8TDM6 1919 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms