RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 PDE4CQ08493 712 aa20.63■□□□□ 0.89
SMARCA4-203ENST00000429416 TPD52L1Q16890 204 aaPredicted RBP20.63■□□□□ 0.89
SMARCA4-203ENST00000429416 MAP4K4O95819 1239 aaPredicted RBP20.62■□□□□ 0.89
SMARCA4-203ENST00000429416 GCP02774 474 aa20.62■□□□□ 0.89
SMARCA4-203ENST00000429416 CT47B1P0C2W7 299 aaPredicted RBP20.62■□□□□ 0.89
SMARCA4-203ENST00000429416 ANO8Q9HCE9 1232 aaPredicted RBP20.62■□□□□ 0.89
SMARCA4-203ENST00000429416 ATP6V1DQ9Y5K8 247 aa20.62■□□□□ 0.89
SMARCA4-203ENST00000429416 NACAP1Q9BZK3 213 aa20.62■□□□□ 0.89
SMARCA4-203ENST00000429416 IL1RAPL2Q9NP60 686 aa20.62■□□□□ 0.89
SMARCA4-203ENST00000429416 DISP3Q9P2K9 1392 aa20.62■□□□□ 0.89
SMARCA4-203ENST00000429416 C6orf229H3BNL8 230 aa20.62■□□□□ 0.89
SMARCA4-203ENST00000429416 VPS37CA5D8V6 355 aaPredicted RBP20.61■□□□□ 0.89
SMARCA4-203ENST00000429416 IL2RBP14784 551 aa20.61■□□□□ 0.89
SMARCA4-203ENST00000429416 IDH1O75874 414 aaKnown RBP20.61■□□□□ 0.89
SMARCA4-203ENST00000429416 IFT57Q9NWB7 429 aa20.61■□□□□ 0.89
SMARCA4-203ENST00000429416 CDC45O75419 566 aa20.61■□□□□ 0.89
SMARCA4-203ENST00000429416 DBF4Q9UBU7 674 aaPredicted RBP20.6■□□□□ 0.89
SMARCA4-203ENST00000429416 FAM83GA6ND36 823 aa20.6■□□□□ 0.89
SMARCA4-203ENST00000429416 SLAIN2Q9P270 581 aa20.6■□□□□ 0.89
SMARCA4-203ENST00000429416 IFIT5Q13325 482 aaKnown RBP20.59■□□□□ 0.89
SMARCA4-203ENST00000429416 TFCP2L1Q9NZI6 479 aa20.59■□□□□ 0.89
SMARCA4-203ENST00000429416 CAVIN4Q5BKX8 364 aa20.59■□□□□ 0.89
SMARCA4-203ENST00000429416 DDX17Q92841 729 aaKnown RBP20.59■□□□□ 0.89
SMARCA4-203ENST00000429416 KAT6BQ8WYB5 2073 aa20.59■□□□□ 0.89
SMARCA4-203ENST00000429416 NBPF14Q5TI25 921 aa20.59■□□□□ 0.89
SMARCA4-203ENST00000429416 PDE3AQ14432 1141 aa20.58■□□□□ 0.89
SMARCA4-203ENST00000429416 F6X3S4 739 aa20.58■□□□□ 0.89
SMARCA4-203ENST00000429416 HIP1O00291 1037 aa20.58■□□□□ 0.89
SMARCA4-203ENST00000429416 A0A087WZG4 1122 aa20.58■□□□□ 0.89
SMARCA4-203ENST00000429416 ATP5J2-PTCD1G3V325 749 aa20.58■□□□□ 0.88
SMARCA4-203ENST00000429416 HYPKQ9NX55 129 aa20.58■□□□□ 0.88
SMARCA4-203ENST00000429416 SMC3Q9UQE7 1217 aa20.58■□□□□ 0.88
SMARCA4-203ENST00000429416 SLC39A6Q13433 755 aa20.58■□□□□ 0.88
SMARCA4-203ENST00000429416 IFIT1P09914 478 aaKnown RBP20.57■□□□□ 0.88
SMARCA4-203ENST00000429416 NBPF6Q5VWK0 638 aa20.57■□□□□ 0.88
SMARCA4-203ENST00000429416 NBPF5PQ86XG9 351 aaPredicted RBP20.57■□□□□ 0.88
SMARCA4-203ENST00000429416 GCC1Q96CN9 775 aa20.57■□□□□ 0.88
SMARCA4-203ENST00000429416 NBPF4Q96M43 638 aa20.57■□□□□ 0.88
SMARCA4-203ENST00000429416 SNRPA1P09661 255 aaKnown RBP20.56■□□□□ 0.88
SMARCA4-203ENST00000429416 TTLL12Q14166 644 aaPredicted RBP20.56■□□□□ 0.88
SMARCA4-203ENST00000429416 ZSCAN25Q6NSZ9 544 aa20.56■□□□□ 0.88
SMARCA4-203ENST00000429416 PSMA5P28066 241 aa20.56■□□□□ 0.88
SMARCA4-203ENST00000429416 SMARCC1Q92922 1105 aaPredicted RBP20.56■□□□□ 0.88
SMARCA4-203ENST00000429416 XBP1P17861 261 aa20.56■□□□□ 0.88
SMARCA4-203ENST00000429416 BRMS1Q9HCU9 246 aa20.56■□□□□ 0.88
SMARCA4-203ENST00000429416 DNAJC5Q9H3Z4 198 aa20.55■□□□□ 0.88
SMARCA4-203ENST00000429416 ANXA1P04083 346 aa20.55■□□□□ 0.88
SMARCA4-203ENST00000429416 NSD2O96028 1365 aa20.55■□□□□ 0.88
SMARCA4-203ENST00000429416 TDO2P48775 406 aa20.55■□□□□ 0.88
SMARCA4-203ENST00000429416 DDX46Q7L014 1031 aaKnown RBP20.55■□□□□ 0.88
SMARCA4-203ENST00000429416 DNAAF4Q8WXU2 420 aa20.55■□□□□ 0.88
SMARCA4-203ENST00000429416 ATP2B1P20020 1258 aa20.54■□□□□ 0.88
SMARCA4-203ENST00000429416 MVPQ14764 893 aaKnown RBP20.54■□□□□ 0.88
SMARCA4-203ENST00000429416 PDZRN3Q9UPQ7 1066 aa20.54■□□□□ 0.88
SMARCA4-203ENST00000429416 EXOC6BQ9Y2D4 811 aa20.53■□□□□ 0.88
SMARCA4-203ENST00000429416 ATP7AQ04656 1500 aa20.53■□□□□ 0.88
SMARCA4-203ENST00000429416 ST5P78524 1137 aa20.53■□□□□ 0.88
SMARCA4-203ENST00000429416 ANKRD36BQ8N2N9 1353 aa20.53■□□□□ 0.88
SMARCA4-203ENST00000429416 PPP1R42Q7Z4L9 355 aa20.53■□□□□ 0.88
SMARCA4-203ENST00000429416 CCDC47Q96A33 483 aaKnown RBP20.53■□□□□ 0.88
SMARCA4-203ENST00000429416 CNKSR2Q8WXI2 1034 aa20.53■□□□□ 0.88
SMARCA4-203ENST00000429416 ABCA5Q8WWZ7 1642 aa20.53■□□□□ 0.88
SMARCA4-203ENST00000429416 ANKRD18BA2A2Z9 1011 aa20.53■□□□□ 0.88
SMARCA4-203ENST00000429416 NEO1Q92859 1461 aa20.52■□□□□ 0.88
SMARCA4-203ENST00000429416 TMEM57Q8N5G2 664 aa20.52■□□□□ 0.87
SMARCA4-203ENST00000429416 AEBP1Q8IUX7 1158 aa20.51■□□□□ 0.87
SMARCA4-203ENST00000429416 POLD1P28340 1107 aa20.51■□□□□ 0.87
SMARCA4-203ENST00000429416 AKAP2Q9Y2D5 859 aa20.51■□□□□ 0.87
SMARCA4-203ENST00000429416 YEATS2Q9ULM3 1422 aa20.51■□□□□ 0.87
SMARCA4-203ENST00000429416 ZFYVE16Q7Z3T8 1539 aa20.51■□□□□ 0.87
SMARCA4-203ENST00000429416 FAM98CQ17RN3 349 aaKnown RBP20.51■□□□□ 0.87
SMARCA4-203ENST00000429416 SETDB2Q96T68 719 aa20.51■□□□□ 0.87
SMARCA4-203ENST00000429416 IPO9Q96P70 1041 aaKnown RBP20.51■□□□□ 0.87
SMARCA4-203ENST00000429416 MAP3K2Q9Y2U5 619 aa20.51■□□□□ 0.87
SMARCA4-203ENST00000429416 CEP89Q96ST8 783 aa20.5■□□□□ 0.87
SMARCA4-203ENST00000429416 SLFN5Q08AF3 891 aa20.5■□□□□ 0.87
SMARCA4-203ENST00000429416 SSH1Q8WYL5 1049 aa20.5■□□□□ 0.87
SMARCA4-203ENST00000429416 JARID2Q92833 1246 aaPredicted RBP20.5■□□□□ 0.87
SMARCA4-203ENST00000429416 DZIP1Q86YF9 867 aaKnown RBP20.5■□□□□ 0.87
SMARCA4-203ENST00000429416 BICD2Q8TD16 824 aa20.5■□□□□ 0.87
SMARCA4-203ENST00000429416 USP21Q9UK80 565 aa20.5■□□□□ 0.87
SMARCA4-203ENST00000429416 MPHOSPH10O00566 681 aaKnown RBP20.49■□□□□ 0.87
SMARCA4-203ENST00000429416 NUTM1Q86Y26 1132 aa20.49■□□□□ 0.87
SMARCA4-203ENST00000429416 MSNP26038 577 aaKnown RBP20.49■□□□□ 0.87
SMARCA4-203ENST00000429416 CRACR2BQ8N4Y2 399 aaPredicted RBP20.49■□□□□ 0.87
SMARCA4-203ENST00000429416 C22orf23Q9BZE7 217 aa20.49■□□□□ 0.87
SMARCA4-203ENST00000429416 LTKP29376 864 aa20.49■□□□□ 0.87
SMARCA4-203ENST00000429416 PIP4K2AP48426 406 aaPredicted RBP20.49■□□□□ 0.87
SMARCA4-203ENST00000429416 EIF4A2Q14240 407 aaKnown RBP20.49■□□□□ 0.87
SMARCA4-203ENST00000429416 AIDAQ96BJ3 306 aa20.49■□□□□ 0.87
SMARCA4-203ENST00000429416 YTHDC2Q9H6S0 1430 aaKnown RBP20.49■□□□□ 0.87
SMARCA4-203ENST00000429416 FLIIQ13045 1269 aa20.49■□□□□ 0.87
SMARCA4-203ENST00000429416 ABCC11Q96J66 1382 aa20.49■□□□□ 0.87
SMARCA4-203ENST00000429416 USP5P45974 858 aa20.48■□□□□ 0.87
SMARCA4-203ENST00000429416 NFATC2IPQ8NCF5 419 aa20.48■□□□□ 0.87
SMARCA4-203ENST00000429416 NUP133Q8WUM0 1156 aa20.48■□□□□ 0.87
SMARCA4-203ENST00000429416 PRM3Q9NNZ6 103 aa20.48■□□□□ 0.87
SMARCA4-203ENST00000429416 CWC25Q9NXE8 425 aaPredicted RBP20.48■□□□□ 0.87
SMARCA4-203ENST00000429416 UBE3BQ7Z3V4 1068 aa20.48■□□□□ 0.87
SMARCA4-203ENST00000429416 CDC5LQ99459 802 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms