RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 TRIM6-TRIM34B2RNG4 842 aa13.81□□□□□ -0.2
HIPK2-203ENST00000428878 C8orf37Q96NL8 207 aa13.81□□□□□ -0.2
HIPK2-203ENST00000428878 AXIN2Q9Y2T1 843 aa13.81□□□□□ -0.2
HIPK2-203ENST00000428878 ADGRB1O14514 1584 aa13.8□□□□□ -0.2
HIPK2-203ENST00000428878 NOL8Q76FK4 1167 aaKnown RBP13.8□□□□□ -0.2
HIPK2-203ENST00000428878 NFATC2IPQ8NCF5 419 aa13.8□□□□□ -0.2
HIPK2-203ENST00000428878 CENPQQ7L2Z9 268 aaPredicted RBP13.8□□□□□ -0.2
HIPK2-203ENST00000428878 PDZRN3Q9UPQ7 1066 aa13.8□□□□□ -0.2
HIPK2-203ENST00000428878 KIF16BQ96L93 1317 aa13.8□□□□□ -0.2
HIPK2-203ENST00000428878 G2E3Q7L622 706 aa13.8□□□□□ -0.2
HIPK2-203ENST00000428878 BTG4Q9NY30 223 aa13.8□□□□□ -0.2
HIPK2-203ENST00000428878 NKTRP30414 1462 aaKnown RBP13.79□□□□□ -0.2
HIPK2-203ENST00000428878 FAM182BQ5T319 152 aa13.79□□□□□ -0.2
HIPK2-203ENST00000428878 ERICH6BQ5W0A0 696 aa13.79□□□□□ -0.2
HIPK2-203ENST00000428878 CFAP44Q96MT7 982 aa13.79□□□□□ -0.2
HIPK2-203ENST00000428878 PUS7Q96PZ0 661 aaKnown RBP13.79□□□□□ -0.2
HIPK2-203ENST00000428878 PCDHB15Q9Y5E8 787 aa13.79□□□□□ -0.2
HIPK2-203ENST00000428878 MVPQ14764 893 aaKnown RBP13.79□□□□□ -0.2
HIPK2-203ENST00000428878 SLKQ9H2G2 1235 aaPredicted RBP13.79□□□□□ -0.2
HIPK2-203ENST00000428878 SMARCA5O60264 1052 aaPredicted RBP13.79□□□□□ -0.2
HIPK2-203ENST00000428878 SIL1Q9H173 461 aa13.79□□□□□ -0.2
HIPK2-203ENST00000428878 FLT4P35916 1363 aa13.79□□□□□ -0.2
HIPK2-203ENST00000428878 ZFYVE9O95405 1425 aa13.78□□□□□ -0.2
HIPK2-203ENST00000428878 TAF7Q15545 349 aaPredicted RBP13.78□□□□□ -0.2
HIPK2-203ENST00000428878 API5Q9BZZ5 524 aaKnown RBP13.78□□□□□ -0.2
HIPK2-203ENST00000428878 RILPL2Q969X0 211 aa13.78□□□□□ -0.2
HIPK2-203ENST00000428878 IP6K1Q92551 441 aa13.77□□□□□ -0.21
HIPK2-203ENST00000428878 EXOC6BQ9Y2D4 811 aa13.77□□□□□ -0.21
HIPK2-203ENST00000428878 MSH5O43196 834 aa13.77□□□□□ -0.21
HIPK2-203ENST00000428878 CCDC30Q5VVM6 783 aa13.77□□□□□ -0.21
HIPK2-203ENST00000428878 TSHZ3Q63HK5 1081 aa13.77□□□□□ -0.21
HIPK2-203ENST00000428878 PLEKHF1Q96S99 279 aa13.76□□□□□ -0.21
HIPK2-203ENST00000428878 PHAXQ9H814 394 aaKnown RBP13.76□□□□□ -0.21
HIPK2-203ENST00000428878 IL1RAPL2Q9NP60 686 aa13.76□□□□□ -0.21
HIPK2-203ENST00000428878 IFT57Q9NWB7 429 aa13.76□□□□□ -0.21
HIPK2-203ENST00000428878 MAP4K4O95819 1239 aaPredicted RBP13.76□□□□□ -0.21
HIPK2-203ENST00000428878 SPG7Q9UQ90 795 aa13.76□□□□□ -0.21
HIPK2-203ENST00000428878 USP6P35125 1406 aa13.76□□□□□ -0.21
HIPK2-203ENST00000428878 ATP5J2-PTCD1G3V325 749 aa13.75□□□□□ -0.21
HIPK2-203ENST00000428878 VAMP4O75379 141 aa13.75□□□□□ -0.21
HIPK2-203ENST00000428878 QRICH2Q9H0J4 1663 aa13.75□□□□□ -0.21
HIPK2-203ENST00000428878 PRAMEF22A3QJZ6 481 aa13.75□□□□□ -0.21
HIPK2-203ENST00000428878 CHPF2Q9P2E5 772 aa13.74□□□□□ -0.21
HIPK2-203ENST00000428878 PDE3AQ14432 1141 aa13.74□□□□□ -0.21
HIPK2-203ENST00000428878 ARHGEF28Q8N1W1 1705 aaKnown RBP13.74□□□□□ -0.21
HIPK2-203ENST00000428878 SETD1AO15047 1707 aaKnown RBP13.74□□□□□ -0.21
HIPK2-203ENST00000428878 NPC1L1Q9UHC9 1359 aa13.74□□□□□ -0.21
HIPK2-203ENST00000428878 IL17REQ8NFR9 667 aa13.74□□□□□ -0.21
HIPK2-203ENST00000428878 BRINP3Q76B58 766 aa13.73□□□□□ -0.21
HIPK2-203ENST00000428878 UBTFL1P0CB47 393 aaPredicted RBP13.73□□□□□ -0.21
HIPK2-203ENST00000428878 GTF2E1P29083 439 aaPredicted RBP13.73□□□□□ -0.21
HIPK2-203ENST00000428878 LARP1Q6PKG0 1096 aaKnown RBP13.73□□□□□ -0.21
HIPK2-203ENST00000428878 MEIS3Q99687 375 aa13.73□□□□□ -0.21
HIPK2-203ENST00000428878 ZBTB3Q9H5J0 574 aa13.73□□□□□ -0.21
HIPK2-203ENST00000428878 PI4KAP2A4QPH2 592 aa13.73□□□□□ -0.21
HIPK2-203ENST00000428878 SURF6O75683 361 aaKnown RBP13.73□□□□□ -0.21
HIPK2-203ENST00000428878 PI4KAP1Q8N8J0 262 aa13.73□□□□□ -0.21
HIPK2-203ENST00000428878 TAF7LQ5H9L4 462 aa13.72□□□□□ -0.21
HIPK2-203ENST00000428878 KIAA0232Q92628 1395 aa13.72□□□□□ -0.21
HIPK2-203ENST00000428878 KCNQ4P56696 695 aa13.72□□□□□ -0.21
HIPK2-203ENST00000428878 BICDL1Q6ZP65 573 aa13.72□□□□□ -0.21
HIPK2-203ENST00000428878 SIRT1Q96EB6 747 aa13.72□□□□□ -0.21
HIPK2-203ENST00000428878 CPS1P31327 1500 aa13.71□□□□□ -0.21
HIPK2-203ENST00000428878 FLIIQ13045 1269 aa13.71□□□□□ -0.21
HIPK2-203ENST00000428878 FAM161AQ3B820 660 aa13.71□□□□□ -0.21
HIPK2-203ENST00000428878 NEXNQ0ZGT2 675 aa13.71□□□□□ -0.21
HIPK2-203ENST00000428878 KCNJ4P48050 445 aa13.7□□□□□ -0.22
HIPK2-203ENST00000428878 GPTP24298 496 aa13.7□□□□□ -0.22
HIPK2-203ENST00000428878 SBNO1A3KN83 1393 aa13.7□□□□□ -0.22
HIPK2-203ENST00000428878 CHMP4BQ9H444 224 aaKnown RBP13.7□□□□□ -0.22
HIPK2-203ENST00000428878 HMMRO75330 724 aa13.69□□□□□ -0.22
HIPK2-203ENST00000428878 BLMP54132 1417 aaPredicted RBP13.68□□□□□ -0.22
HIPK2-203ENST00000428878 FAM135BQ49AJ0 1406 aa13.68□□□□□ -0.22
HIPK2-203ENST00000428878 CWF19L2Q2TBE0 894 aaKnown RBP13.68□□□□□ -0.22
HIPK2-203ENST00000428878 ARHGEF25Q86VW2 580 aa13.68□□□□□ -0.22
HIPK2-203ENST00000428878 IFNL2Q8IZJ0 200 aa13.68□□□□□ -0.22
HIPK2-203ENST00000428878 ZCRB1Q8TBF4 217 aaKnown RBP13.68□□□□□ -0.22
HIPK2-203ENST00000428878 NAP1L2Q9ULW6 460 aaPredicted RBP13.68□□□□□ -0.22
HIPK2-203ENST00000428878 NOP58Q9Y2X3 529 aaKnown RBP13.68□□□□□ -0.22
HIPK2-203ENST00000428878 LRRFIP2Q9Y608 721 aaKnown RBP13.68□□□□□ -0.22
HIPK2-203ENST00000428878 MRPL50Q8N5N7 158 aaKnown RBP13.68□□□□□ -0.22
HIPK2-203ENST00000428878 TOM1O60784 492 aa13.67□□□□□ -0.22
HIPK2-203ENST00000428878 C16orf71Q8IYS4 520 aaPredicted RBP13.67□□□□□ -0.22
HIPK2-203ENST00000428878 MYD88Q99836 296 aa13.67□□□□□ -0.22
HIPK2-203ENST00000428878 SRCIN1Q9C0H9 1055 aa13.67□□□□□ -0.22
HIPK2-203ENST00000428878 TMOD3Q9NYL9 352 aa13.67□□□□□ -0.22
HIPK2-203ENST00000428878 SRGAP3O43295 1099 aa13.67□□□□□ -0.22
HIPK2-203ENST00000428878 EXOC5O00471 708 aa13.66□□□□□ -0.22
HIPK2-203ENST00000428878 GORABQ5T7V8 394 aa13.66□□□□□ -0.22
HIPK2-203ENST00000428878 FOXD4L5Q5VV16 416 aaPredicted RBP13.66□□□□□ -0.22
HIPK2-203ENST00000428878 FOXD4L4Q8WXT5 416 aaPredicted RBP13.66□□□□□ -0.22
HIPK2-203ENST00000428878 NEUROD6Q96NK8 337 aa13.66□□□□□ -0.22
HIPK2-203ENST00000428878 AMOTQ4VCS5 1084 aa13.66□□□□□ -0.22
HIPK2-203ENST00000428878 NUTM1Q86Y26 1132 aa13.66□□□□□ -0.22
HIPK2-203ENST00000428878 ZNF521Q96K83 1311 aa13.66□□□□□ -0.22
HIPK2-203ENST00000428878 MAP3K2Q9Y2U5 619 aa13.66□□□□□ -0.22
HIPK2-203ENST00000428878 NRXN3Q9Y4C0 1643 aa13.66□□□□□ -0.22
HIPK2-203ENST00000428878 DDX58O95786 925 aaKnown RBP13.65□□□□□ -0.22
HIPK2-203ENST00000428878 FAM98CQ17RN3 349 aaKnown RBP13.65□□□□□ -0.22
HIPK2-203ENST00000428878 CCDC27Q2M243 656 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms