RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 KDRP35968 1356 aa29.93■■■□□ 2.38
PTPN18-205ENST00000428843 ZCRB1Q8TBF4 217 aaKnown RBP29.93■■■□□ 2.38
PTPN18-205ENST00000428843 NUDCQ9Y266 331 aa29.93■■■□□ 2.38
PTPN18-205ENST00000428843 HMOX1P09601 288 aa29.92■■■□□ 2.38
PTPN18-205ENST00000428843 PKD1L3Q7Z443 1732 aa29.92■■■□□ 2.38
PTPN18-205ENST00000428843 MARCH10Q8NA82 808 aaPredicted RBP29.92■■■□□ 2.38
PTPN18-205ENST00000428843 DDX54Q8TDD1 881 aaKnown RBP29.88■■■□□ 2.37
PTPN18-205ENST00000428843 U2AF1L5P0DN76 240 aaPredicted RBP29.86■■■□□ 2.37
PTPN18-205ENST00000428843 U2AF1Q01081 240 aaKnown RBP eCLIP29.86■■■□□ 2.37
PTPN18-205ENST00000428843 FAM196AQ6ZSG2 479 aa29.86■■■□□ 2.37
PTPN18-205ENST00000428843 PLEKHG2Q9H7P9 1386 aa29.86■■■□□ 2.37
PTPN18-205ENST00000428843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.85■■■□□ 2.37
PTPN18-205ENST00000428843 SPG7Q9UQ90 795 aa29.85■■■□□ 2.37
PTPN18-205ENST00000428843 PCDH11XQ9BZA7 1347 aa29.84■■■□□ 2.37
PTPN18-205ENST00000428843 PCDH11YQ9BZA8 1340 aa29.84■■■□□ 2.37
PTPN18-205ENST00000428843 PLEKHO1Q53GL0 409 aaPredicted RBP29.82■■■□□ 2.36
PTPN18-205ENST00000428843 SBF2Q86WG5 1849 aa29.82■■■□□ 2.36
PTPN18-205ENST00000428843 BCL9O00512 1426 aa29.81■■■□□ 2.36
PTPN18-205ENST00000428843 SOCS7O14512 581 aa29.81■■■□□ 2.36
PTPN18-205ENST00000428843 CYP27B1O15528 508 aa29.8■■■□□ 2.36
PTPN18-205ENST00000428843 AMOTQ4VCS5 1084 aa29.8■■■□□ 2.36
PTPN18-205ENST00000428843 UPF1Q92900 1129 aaKnown RBP eCLIP29.8■■■□□ 2.36
PTPN18-205ENST00000428843 RSPH6AQ9H0K4 717 aa29.8■■■□□ 2.36
PTPN18-205ENST00000428843 EP400Q96L91 3159 aa29.8■■■□□ 2.36
PTPN18-205ENST00000428843 CCDC184Q52MB2 194 aa29.78■■■□□ 2.36
PTPN18-205ENST00000428843 FCHSD2O94868 740 aa29.77■■■□□ 2.36
PTPN18-205ENST00000428843 PRKAR2BP31323 418 aa29.77■■■□□ 2.36
PTPN18-205ENST00000428843 DIEXFQ68CQ4 756 aaKnown RBP29.76■■■□□ 2.35
PTPN18-205ENST00000428843 TRIM37O94972 964 aa29.75■■■□□ 2.35
PTPN18-205ENST00000428843 PHKG2P15735 406 aa29.75■■■□□ 2.35
PTPN18-205ENST00000428843 ZNF530Q6P9A1 599 aaPredicted RBP29.75■■■□□ 2.35
PTPN18-205ENST00000428843 IFNL2Q8IZJ0 200 aa29.75■■■□□ 2.35
PTPN18-205ENST00000428843 KAT6BQ8WYB5 2073 aa29.74■■■□□ 2.35
PTPN18-205ENST00000428843 DOT1LQ8TEK3 1739 aa29.74■■■□□ 2.35
PTPN18-205ENST00000428843 ACSBG1Q96GR2 724 aa29.73■■■□□ 2.35
PTPN18-205ENST00000428843 TNS1Q9HBL0 1735 aaKnown RBP29.73■■■□□ 2.35
PTPN18-205ENST00000428843 WDR43Q15061 677 aaKnown RBP eCLIP29.72■■■□□ 2.35
PTPN18-205ENST00000428843 MTHFSDQ2M296 383 aaKnown RBP29.72■■■□□ 2.35
PTPN18-205ENST00000428843 NHSQ6T4R5 1651 aa29.72■■■□□ 2.35
PTPN18-205ENST00000428843 NKX1-1Q15270 411 aaPredicted RBP29.71■■■□□ 2.35
PTPN18-205ENST00000428843 CCDC125Q86Z20 511 aa29.71■■■□□ 2.35
PTPN18-205ENST00000428843 PHACTR3Q96KR7 559 aa29.71■■■□□ 2.35
PTPN18-205ENST00000428843 C1orf141Q5JVX7 400 aa29.7■■■□□ 2.35
PTPN18-205ENST00000428843 MRS2Q9HD23 443 aa29.7■■■□□ 2.35
PTPN18-205ENST00000428843 TOGARAM1Q9Y4F4 1720 aa29.69■■■□□ 2.34
PTPN18-205ENST00000428843 KCNQ2O43526 872 aa29.69■■■□□ 2.34
PTPN18-205ENST00000428843 PTF1AQ7RTS3 328 aa29.68■■■□□ 2.34
PTPN18-205ENST00000428843 PLEKHF1Q96S99 279 aa29.68■■■□□ 2.34
PTPN18-205ENST00000428843 SF3B2Q13435 895 aaKnown RBP29.67■■■□□ 2.34
PTPN18-205ENST00000428843 BCL11BQ9C0K0 894 aaPredicted RBP29.67■■■□□ 2.34
PTPN18-205ENST00000428843 AKAP4Q5JQC9 854 aa29.66■■■□□ 2.34
PTPN18-205ENST00000428843 GAS2L2Q8NHY3 880 aa29.66■■■□□ 2.34
PTPN18-205ENST00000428843 PNNQ9H307 717 aaKnown RBP29.66■■■□□ 2.34
PTPN18-205ENST00000428843 ADAMTS8Q9UP79 889 aa29.66■■■□□ 2.34
PTPN18-205ENST00000428843 HSP90AB1P08238 724 aaKnown RBP29.65■■■□□ 2.34
PTPN18-205ENST00000428843 PRIM1P49642 420 aaKnown RBP29.65■■■□□ 2.34
PTPN18-205ENST00000428843 ITGB4P16144 1822 aa29.64■■■□□ 2.34
PTPN18-205ENST00000428843 NEFMP07197 916 aa29.63■■■□□ 2.33
PTPN18-205ENST00000428843 SYTL4Q96C24 671 aaPredicted RBP29.63■■■□□ 2.33
PTPN18-205ENST00000428843 DCAF5Q96JK2 942 aa29.63■■■□□ 2.33
PTPN18-205ENST00000428843 BTAF1O14981 1849 aa29.63■■■□□ 2.33
PTPN18-205ENST00000428843 VIRMAQ69YN4 1812 aaKnown RBP29.63■■■□□ 2.33
PTPN18-205ENST00000428843 KDM6AO15550 1401 aaPredicted RBP29.62■■■□□ 2.33
PTPN18-205ENST00000428843 APBA3O96018 575 aa29.62■■■□□ 2.33
PTPN18-205ENST00000428843 SCN11AQ9UI33 1791 aa29.62■■■□□ 2.33
PTPN18-205ENST00000428843 MPRIPQ6WCQ1 1025 aa29.61■■■□□ 2.33
PTPN18-205ENST00000428843 PNISRQ8TF01 805 aaKnown RBP29.61■■■□□ 2.33
PTPN18-205ENST00000428843 MAPK8IP3Q9UPT6 1336 aa29.6■■■□□ 2.33
PTPN18-205ENST00000428843 MAP3K5Q99683 1374 aa29.6■■■□□ 2.33
PTPN18-205ENST00000428843 BAG6P46379 1132 aa29.59■■■□□ 2.33
PTPN18-205ENST00000428843 DEFB132Q7Z7B7 95 aa29.59■■■□□ 2.33
PTPN18-205ENST00000428843 CCDC146Q8IYE0 955 aa29.59■■■□□ 2.33
PTPN18-205ENST00000428843 DLG5Q8TDM6 1919 aa29.57■■■□□ 2.32
PTPN18-205ENST00000428843 ADAMTS7Q9UKP4 1686 aa29.57■■■□□ 2.32
PTPN18-205ENST00000428843 GNAT3A8MTJ3 354 aa29.57■■■□□ 2.32
PTPN18-205ENST00000428843 ERVV-2B6SEH9 535 aa29.56■■■□□ 2.32
PTPN18-205ENST00000428843 RUNDC1Q96C34 613 aa29.56■■■□□ 2.32
PTPN18-205ENST00000428843 LGR6Q9HBX8 967 aa29.56■■■□□ 2.32
PTPN18-205ENST00000428843 RNMTO43148 476 aaKnown RBP29.55■■■□□ 2.32
PTPN18-205ENST00000428843 EN1Q05925 392 aaPredicted RBP29.55■■■□□ 2.32
PTPN18-205ENST00000428843 NFE2L2Q16236 605 aa29.54■■■□□ 2.32
PTPN18-205ENST00000428843 MIER1Q8N108 512 aa29.54■■■□□ 2.32
PTPN18-205ENST00000428843 CCER2I3L3R5 266 aa29.53■■■□□ 2.32
PTPN18-205ENST00000428843 PIGBQ92521 554 aa29.53■■■□□ 2.32
PTPN18-205ENST00000428843 TMOD3Q9NYL9 352 aa29.53■■■□□ 2.32
PTPN18-205ENST00000428843 RGPD3A6NKT7 1758 aaPredicted RBP29.52■■■□□ 2.32
PTPN18-205ENST00000428843 RGPD4Q7Z3J3 1758 aa29.52■■■□□ 2.32
PTPN18-205ENST00000428843 PLSCR1O15162 318 aa29.52■■■□□ 2.32
PTPN18-205ENST00000428843 CABP4P57796 275 aa29.51■■■□□ 2.31
PTPN18-205ENST00000428843 IL17REQ8NFR9 667 aa29.51■■■□□ 2.31
PTPN18-205ENST00000428843 CAMKK2Q96RR4 588 aa29.51■■■□□ 2.31
PTPN18-205ENST00000428843 EZH2Q15910 746 aaKnown RBP29.5■■■□□ 2.31
PTPN18-205ENST00000428843 MRC1P22897 1456 aa29.49■■■□□ 2.31
PTPN18-205ENST00000428843 TMPOP42166 694 aaKnown RBP29.49■■■□□ 2.31
PTPN18-205ENST00000428843 RTF1Q92541 710 aaKnown RBP29.49■■■□□ 2.31
PTPN18-205ENST00000428843 HTATSF1O43719 755 aaKnown RBP29.48■■■□□ 2.31
PTPN18-205ENST00000428843 FAM9BQ8IZU0 186 aa29.47■■■□□ 2.31
PTPN18-205ENST00000428843 NFATC2IPQ8NCF5 419 aa29.47■■■□□ 2.31
PTPN18-205ENST00000428843 SLC52A2Q9HAB3 445 aa29.47■■■□□ 2.31
PTPN18-205ENST00000428843 CEMIPQ8WUJ3 1361 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms