RNA–Protein interactions for RNA: ENST00000428683.5

ZNF3-208, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-208ENST00000428683 PTGER2P43116 358 aa14.22□□□□□ -0.13
ZNF3-208ENST00000428683 EIF4G2P78344 907 aaKnown RBP eCLIP14.22□□□□□ -0.13
ZNF3-208ENST00000428683 ZNF827Q17R98 1081 aa14.22□□□□□ -0.13
ZNF3-208ENST00000428683 KAT6BQ8WYB5 2073 aa14.22□□□□□ -0.13
ZNF3-208ENST00000428683 SMG6Q86US8 1419 aaKnown RBP14.22□□□□□ -0.13
ZNF3-208ENST00000428683 RGPD3A6NKT7 1758 aaPredicted RBP14.22□□□□□ -0.13
ZNF3-208ENST00000428683 RGPD4Q7Z3J3 1758 aa14.22□□□□□ -0.13
ZNF3-208ENST00000428683 TNNT2P45379 298 aaPredicted RBP14.21□□□□□ -0.13
ZNF3-208ENST00000428683 FLT4P35916 1363 aa14.21□□□□□ -0.14
ZNF3-208ENST00000428683 NHSQ6T4R5 1651 aa14.2□□□□□ -0.14
ZNF3-208ENST00000428683 DCAF8L1A6NGE4 600 aa14.2□□□□□ -0.14
ZNF3-208ENST00000428683 SLC27A3Q5K4L6 730 aa14.2□□□□□ -0.14
ZNF3-208ENST00000428683 MTFR1LQ9H019 292 aa14.2□□□□□ -0.14
ZNF3-208ENST00000428683 CGNL1Q0VF96 1302 aa14.19□□□□□ -0.14
ZNF3-208ENST00000428683 AKT1S1Q96B36 256 aa14.19□□□□□ -0.14
ZNF3-208ENST00000428683 PANK3Q9H999 370 aa14.19□□□□□ -0.14
ZNF3-208ENST00000428683 POLKQ9UBT6 870 aa14.18□□□□□ -0.14
ZNF3-208ENST00000428683 RGPD2P0DJD1 1756 aa14.18□□□□□ -0.14
ZNF3-208ENST00000428683 FAM208AQ9UK61 1670 aaKnown RBP14.17□□□□□ -0.14
ZNF3-208ENST00000428683 CYP27B1O15528 508 aa14.17□□□□□ -0.14
ZNF3-208ENST00000428683 MPRIPQ6WCQ1 1025 aa14.17□□□□□ -0.14
ZNF3-208ENST00000428683 EYA1Q99502 592 aa14.17□□□□□ -0.14
ZNF3-208ENST00000428683 FHDC1Q9C0D6 1143 aaPredicted RBP14.17□□□□□ -0.14
ZNF3-208ENST00000428683 TFCP2L1Q9NZI6 479 aa14.17□□□□□ -0.14
ZNF3-208ENST00000428683 CCNL1Q9UK58 526 aaPredicted RBP14.17□□□□□ -0.14
ZNF3-208ENST00000428683 KIF24Q5T7B8 1368 aa14.17□□□□□ -0.14
ZNF3-208ENST00000428683 BTAF1O14981 1849 aa14.17□□□□□ -0.14
ZNF3-208ENST00000428683 WASHC2AQ641Q2 1341 aa14.16□□□□□ -0.14
ZNF3-208ENST00000428683 YY1P25490 414 aa14.16□□□□□ -0.14
ZNF3-208ENST00000428683 ARXQ96QS3 562 aa14.16□□□□□ -0.14
ZNF3-208ENST00000428683 SGIP1Q9BQI5 828 aa14.16□□□□□ -0.14
ZNF3-208ENST00000428683 SYT17Q9BSW7 474 aa14.16□□□□□ -0.14
ZNF3-208ENST00000428683 NSD2O96028 1365 aa14.16□□□□□ -0.14
ZNF3-208ENST00000428683 CASZ1Q86V15 1759 aa14.16□□□□□ -0.14
ZNF3-208ENST00000428683 PCDH11XQ9BZA7 1347 aa14.15□□□□□ -0.14
ZNF3-208ENST00000428683 PCDH11YQ9BZA8 1340 aa14.15□□□□□ -0.14
ZNF3-208ENST00000428683 MSH5O43196 834 aa14.15□□□□□ -0.14
ZNF3-208ENST00000428683 PNPLA7Q6ZV29 1317 aa14.15□□□□□ -0.15
ZNF3-208ENST00000428683 KLHL34Q8N239 644 aa14.14□□□□□ -0.15
ZNF3-208ENST00000428683 MYOM1P52179 1685 aa14.14□□□□□ -0.15
ZNF3-208ENST00000428683 KIF20BQ96Q89 1820 aa14.13□□□□□ -0.15
ZNF3-208ENST00000428683 SPG7Q9UQ90 795 aa14.13□□□□□ -0.15
ZNF3-208ENST00000428683 EIF4A2Q14240 407 aaKnown RBP14.12□□□□□ -0.15
ZNF3-208ENST00000428683 SLC16A10Q8TF71 515 aa14.12□□□□□ -0.15
ZNF3-208ENST00000428683 POLD1P28340 1107 aa14.11□□□□□ -0.15
ZNF3-208ENST00000428683 MORC1Q86VD1 984 aa14.11□□□□□ -0.15
ZNF3-208ENST00000428683 COL23A1Q86Y22 540 aaPredicted RBP14.11□□□□□ -0.15
ZNF3-208ENST00000428683 PIGBQ92521 554 aa14.11□□□□□ -0.15
ZNF3-208ENST00000428683 PAPPAQ13219 1627 aa14.11□□□□□ -0.15
ZNF3-208ENST00000428683 DOT1LQ8TEK3 1739 aa14.1□□□□□ -0.15
ZNF3-208ENST00000428683 SHANK3Q9BYB0 1731 aa14.1□□□□□ -0.15
ZNF3-208ENST00000428683 NKX1-1Q15270 411 aaPredicted RBP14.09□□□□□ -0.15
ZNF3-208ENST00000428683 IFNL2Q8IZJ0 200 aa14.09□□□□□ -0.15
ZNF3-208ENST00000428683 KNSTRNQ9Y448 316 aa14.09□□□□□ -0.15
ZNF3-208ENST00000428683 PALLDQ8WX93 1383 aa14.09□□□□□ -0.15
ZNF3-208ENST00000428683 PHKG2P15735 406 aa14.08□□□□□ -0.16
ZNF3-208ENST00000428683 MSL1Q68DK7 614 aa14.08□□□□□ -0.16
ZNF3-208ENST00000428683 SMARCC1Q92922 1105 aaPredicted RBP14.08□□□□□ -0.16
ZNF3-208ENST00000428683 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.08□□□□□ -0.16
ZNF3-208ENST00000428683 SMIM5Q71RC9 77 aa14.07□□□□□ -0.16
ZNF3-208ENST00000428683 TMOD3Q9NYL9 352 aa14.07□□□□□ -0.16
ZNF3-208ENST00000428683 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
ZNF3-208ENST00000428683 ASAP1Q9ULH1 1129 aa14.06□□□□□ -0.16
ZNF3-208ENST00000428683 MAP2P11137 1827 aaKnown RBP14.06□□□□□ -0.16
ZNF3-208ENST00000428683 GPR162Q16538 588 aa14.05□□□□□ -0.16
ZNF3-208ENST00000428683 NCAPD2Q15021 1401 aa14.05□□□□□ -0.16
ZNF3-208ENST00000428683 LOC102724428A0A0B4J2F2 783 aa14.04□□□□□ -0.16
ZNF3-208ENST00000428683 PHF14O94880 888 aa14.04□□□□□ -0.16
ZNF3-208ENST00000428683 SIK1P57059 783 aa14.04□□□□□ -0.16
ZNF3-208ENST00000428683 PLEKHO1Q53GL0 409 aaPredicted RBP14.04□□□□□ -0.16
ZNF3-208ENST00000428683 NLGN2Q8NFZ4 835 aa14.04□□□□□ -0.16
ZNF3-208ENST00000428683 AK7Q96M32 723 aa14.04□□□□□ -0.16
ZNF3-208ENST00000428683 IGSF1Q8N6C5 1336 aa14.04□□□□□ -0.16
ZNF3-208ENST00000428683 LY75O60449 1722 aa14.04□□□□□ -0.16
ZNF3-208ENST00000428683 HMGB2P26583 209 aaKnown RBP14.03□□□□□ -0.16
ZNF3-208ENST00000428683 ATP6V1AP38606 617 aa14.03□□□□□ -0.16
ZNF3-208ENST00000428683 CNGB1Q14028 1251 aaPredicted RBP14.03□□□□□ -0.16
ZNF3-208ENST00000428683 AMIGO3Q86WK7 504 aa14.03□□□□□ -0.16
ZNF3-208ENST00000428683 AEBP1Q8IUX7 1158 aa14.03□□□□□ -0.16
ZNF3-208ENST00000428683 FLAD1Q8NFF5 587 aa14.03□□□□□ -0.16
ZNF3-208ENST00000428683 ATG3Q9NT62 314 aa14.03□□□□□ -0.16
ZNF3-208ENST00000428683 KIF7Q2M1P5 1343 aa14.03□□□□□ -0.16
ZNF3-208ENST00000428683 ITPK1Q13572 414 aa14.02□□□□□ -0.17
ZNF3-208ENST00000428683 SULT6B1Q6IMI4 303 aa14.02□□□□□ -0.17
ZNF3-208ENST00000428683 ZNF530Q6P9A1 599 aaPredicted RBP14.02□□□□□ -0.17
ZNF3-208ENST00000428683 LINC00116Q8NCU8 138 aa14.02□□□□□ -0.17
ZNF3-208ENST00000428683 AMER1Q5JTC6 1135 aaPredicted RBP14.01□□□□□ -0.17
ZNF3-208ENST00000428683 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
ZNF3-208ENST00000428683 MAP3K5Q99683 1374 aa14□□□□□ -0.17
ZNF3-208ENST00000428683 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14□□□□□ -0.17
ZNF3-208ENST00000428683 IL13P35225 146 aa14□□□□□ -0.17
ZNF3-208ENST00000428683 AMOTQ4VCS5 1084 aa14□□□□□ -0.17
ZNF3-208ENST00000428683 CC2D1BQ5T0F9 858 aaKnown RBP14□□□□□ -0.17
ZNF3-208ENST00000428683 DCAF5Q96JK2 942 aa14□□□□□ -0.17
ZNF3-208ENST00000428683 PKD1L3Q7Z443 1732 aa13.99□□□□□ -0.17
ZNF3-208ENST00000428683 ANKRD26Q9UPS8 1709 aa13.99□□□□□ -0.17
ZNF3-208ENST00000428683 TOGARAM1Q9Y4F4 1720 aa13.99□□□□□ -0.17
ZNF3-208ENST00000428683 ERVV-2B6SEH9 535 aa13.99□□□□□ -0.17
ZNF3-208ENST00000428683 GNPATO15228 680 aa13.99□□□□□ -0.17
ZNF3-208ENST00000428683 HSP90AB1P08238 724 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms